Array 1 227276-229195 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLVM01000001.1 Rhodovulum steppense strain DSM 21153 Ga0310553_101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 227276 29 100.0 32 ............................. CGTGGTTCGTGCCGAAATCCTCGCATCCGCAA 227337 29 100.0 32 ............................. GAGGCTCAGAATCATCCATCCACCTCCCACGC 227398 29 100.0 32 ............................. ACAAAGCGCTCGCCGCTGGATGCCGCCACCGC 227459 29 100.0 32 ............................. GACATTCAGCGCCTCGCCCAACTCCCGTCTAG 227520 29 100.0 32 ............................. GCTCGAGCGGACGGCCCCGCCATGCTGGGCGT 227581 29 100.0 32 ............................. TCTTGATTTCCAGAACCGCGCCGGTGCGGCGA 227642 29 100.0 32 ............................. ATCATCGGGGCGATGGACGAGGTGAAATACGG 227703 29 100.0 32 ............................. TGCGGCGCAGTTCTCCCCTGTGGGGACTGTCT 227764 29 100.0 32 ............................. CTACGCGAGAAGCTTCAAAACCAAACCATCCG 227825 29 100.0 32 ............................. TTGTAGACGACGACGAACGCGTCCAGCAGGTC 227886 29 100.0 32 ............................. GGCATGTTCCGCGGTTCGCGCCTGAGTGACTT 227947 29 100.0 32 ............................. GCATCGGCAACCTGCAGCGCGGCGCGGCCCAT 228008 29 100.0 32 ............................. ACCCCGACCGCCGATCTGGAGCGGCTGATCGA 228069 29 100.0 32 ............................. GCAGTGGCGCGGCGGGCGCGGCCTGTCGGGGC 228130 29 100.0 32 ............................. ACGACGGGCTCGATGCTGGCGATGCCTTGCAG 228191 29 100.0 32 ............................. CCTCATCGCGGGTCATGGGCGTGATTTTCTTT 228252 29 100.0 32 ............................. AATAACGCCGTCGTATCCTCGCTCGAGGCGCG 228313 29 100.0 32 ............................. CCTCATCGCGGGTCATGGGTGTGATCTTCTCG 228374 29 100.0 32 ............................. GCGCTTGCGAATATCGAGCGTGTCCCGCGTGC 228435 29 100.0 32 ............................. ACCGACTTCATCGAGGGCCGATCCGATCTCAT 228496 29 100.0 32 ............................. CGCATCGCGTGCTGTCCAGTCGCGGGGCCAGT 228557 29 100.0 32 ............................. CGGCCATCGAAGATGCGTTCATGGGGGTGGCA 228618 29 100.0 32 ............................. GACTATCGCCCCGCGAGCGAACCGGCAAAAAT 228679 29 100.0 32 ............................. CGACACCGCGCCGTTGATCCGATCATCCGGGT 228740 29 100.0 32 ............................. CCTTCGAGGGCGTAATATTCGGTGTAGCGACC 228801 29 100.0 32 ............................. ATTGGGGGGGGCGCTCCCTTTCCATTAGCGCC 228862 29 100.0 32 ............................. GAGGAAGGGCAGCTGCTGCACGGCGATGGCAC 228923 29 100.0 32 ............................. AAGCGGGCACCGTCTCGACCCTGCTGGGTCTC 228984 29 100.0 32 ............................. ACGGGCCAATTTACCGGCAAGACGCCTTTTGA 229045 29 100.0 32 ............................. TCCGCCCGCCAGGTGGGCGTCTCGGCTGGGTA 229106 29 100.0 32 ............................. AGCGAGAACTTCGCGACGGGCCTTTTCCGTAT 229167 29 93.1 0 ........................T..T. | ========== ====== ====== ====== ============================= ================================ ================== 32 29 99.8 32 CTGTTCCCCGCCCGCGCGGGGATGACCCG # Left flank : TCAGCCCGCGCTGCAACCATTGCGACAGCCGCAATTCGGCATCCTCGATCTCGAGGGCCGTATCGAGGTAACCGACCCCGAGGCCCTCCTCGCCCGGCTGGCCCGCGGCTTCGGCCGCGCCAAGGCGTTCGGCTGCGGCCTGATGCTGATCCGTCGGGCCGCATGAGCAGGGGCGCCCTTCCCGGCCTGCCGCCACCACGGCCGATCCCGCTGAAGGACCGCGCCTCGCTGGTCTTCGTCGAGCGTGCCAGGCTCGATGTGGCCGACGGCGCCTTCGTCGCCCTCAATGCCGATGGTACGCGCACCCAGATCCCGATTGGCGGTCTGGCAGGGATCATGCTCGAACCGGGCGCCCGCATATCGCACGCGGCCGTCGCGCTGGCGGCGCGGGCGGGAACGTTGATCACCTGGGTCGGCGAGGGCGGCGACCGAAAAGCCAACCGTTCGGTACGCGCTTTGACATCGTGAATCTTTCGGTAGATCAAGGGACTGCAGCAAGA # Right flank : GATCGGCGGCGGCGCAGTCGATCAGGTGGCGCGCGGCGTGGCCGTATCGTTTCGATCGACCCTTTTCGAGGGCGAAGAGGATCATCGCCCGGCGGGCGAGGGTGGCGGCCAACGGATGCTCGGCCTGCAGGGCATCGGCCGCCGGGGTCAGCACCTCGTACCTGTCGCCATCCAGATCGGCGGCACGCGCCTCGATCAGCCGTGCGGCTTCGTTATGGTCGGGCCAGTCGAGAAAGAAACACAGGGCCAGCATCCAGTCGGCATGGGACCGGGCAACCGCCTTCGCGCGGTCCTCGGCCGCGATATCCTCGAAATCCGGCAGCGCCTTGAGGTGGCGCCGCAGGCTGTCGGCATTCAGGGTCCGGCAGAAATCCTCCCATAGGAAGGCCTGCAACGCGGTATCGTGGCCAAGGGCGGCCAGGCAGTCGGCATACCCTCGGGCACAGCGTCCCCGGGCCTGGGCACGCGCTGGCAGGCCACGTTCTTCGCGGAGCCGGACT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCCCGCGCGGGGATGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCCCGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 15193-12600 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLVM01000034.1 Rhodovulum steppense strain DSM 21153 Ga0310553_134, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 15192 29 100.0 32 ............................. GTCTTGGACCGGAGGACGCCCCTTTCTGCGCC 15131 29 100.0 32 ............................. AACCTCGATCGTGACGAGGATGACGCCATCCA 15070 29 100.0 32 ............................. ATCGTGTTTCATGGGTTAGTCCTCCTGACCCG 15009 29 100.0 32 ............................. AGATCGGTGTTGATCTTCGACCCGGTGGGAAT 14948 29 100.0 32 ............................. CCAGATGTTGCCTGATCCGGCGTCACCAGTTC 14887 29 100.0 32 ............................. ATGAGCCCCGCAGTCGTCGGGGTGATGGTCAG 14826 29 100.0 32 ............................. GGTATAGGTGCCATCCGAGGACGGCTCGAATG 14765 29 100.0 32 ............................. CTGTTTCGCCGCGCCGTAGGTCACGGCGTAGC 14704 29 100.0 32 ............................. GCGGGGCAGCGGCCGATCATGCTCCCGGTGCT 14643 29 100.0 32 ............................. AGGGTCGACAGCAGCTTGACCTGCGACGCAGC 14582 29 100.0 32 ............................. CCCGCAGACATGCAGCCTGAGCCCCGAGGAGA 14521 29 100.0 32 ............................. TTCGCCTTGGTTTTCTTCGACCTGTGCCGGCG 14460 29 100.0 32 ............................. CGCTTTGGAGCAGATGTAGTGGGCTGTTCTGA 14399 29 100.0 32 ............................. CTGGCCGACCAGACCGAATGGTCCGCCCGCGA 14338 29 100.0 32 ............................. GCGACCGCCGATTTCCTGGACTGCACCGACGT 14277 29 100.0 32 ............................. CCGGACGAGACTATTTCGTCCATGCCGCACCC 14216 29 100.0 32 ............................. CTATCCTGCATTGTGCGGCGATCAAAACCGGC 14155 29 100.0 32 ............................. AGCGACAGTTGGCCCTCTGGGCTTTGGACCTG 14094 29 100.0 32 ............................. CATGTCCCATCCGTCGCTCAGGTGGTCGCGCA 14033 29 100.0 32 ............................. TCTTATCGTCTTGTGTGATTGGTCGGGTGCAC 13972 29 100.0 32 ............................. GCCGGAGCGAGCGGGCGTCCCCTTTGCTCGGT 13911 29 100.0 32 ............................. AGGGTTTGAAGGCGCTTCGGCAGGCCTGGGCG 13850 29 100.0 32 ............................. GAGCACGCGGCGTGACACACCCGTCCATCCTC 13789 29 100.0 32 ............................. GTGGCGAAATCGGGAAACTCGGTCTCGACGAT 13728 29 100.0 32 ............................. GCAAGTCCGGCGCCGCCGCGCCCGGCTGGCTG 13667 29 100.0 34 ............................. GTGAGAACTCTGGACTGGATTTGAACCCCGCTGC 13604 29 100.0 32 ............................. CCCGACGAGACGATTTCCTCCATGCCGCACCC 13543 29 100.0 32 ............................. AACGGCTCGCCGAACCACCATGGCTGCACGAT 13482 29 100.0 32 ............................. TACACCGAGCGCGACTGGGCGATCTTCACCCA 13421 29 100.0 32 ............................. GCGCGATAGTGCCCCTCGATGATCCGGGCATA 13360 29 100.0 32 ............................. GAGTTGCCGGAAAACCGCGCGAGCCAGGTGCA 13299 29 100.0 32 ............................. GCGTGACGGGCTTCTGTGGTGCCGCGCTTCTG 13238 29 100.0 32 ............................. AGCGCGGATTCGGTCCCGTGCCCCCATCCCCA 13177 29 100.0 32 ............................. GGTGATGCGCTGGGGTGATGTTCTTTGTGCCG 13116 29 100.0 32 ............................. GTCACGGTCTGTGTCGAATGCTTCGCCGCCTA 13055 29 100.0 32 ............................. CCGGGGGTGGGCCAGTGACGGGCGCGCAGTTG 12994 29 100.0 32 ............................. CCGTGCCCCGGCACATACAAGCCGCACCCTTC 12933 29 100.0 32 ............................. CGGCACGTTAGACGGCGGGCTAATCTGCTGCT 12872 29 100.0 32 ............................. CGCGTCGTCTACGCTACGGGCCACGAACACCT 12811 29 100.0 32 ............................. TTGCCGAACGGCAACCGGGCACTTTAGGGAGC 12750 29 100.0 32 ............................. GACCGTGGCCATGTCGGAGCGCATAATGTCCT 12689 29 100.0 32 ............................. AGTTTCGGGGGTATAGGGGCGGGGCAGGTCAA 12628 29 93.1 0 ........................T..G. | ========== ====== ====== ====== ============================= ================================== ================== 43 29 99.8 32 CTGTTCCCCGCCCGCGCGGGGATGACCCG # Left flank : GGGCCGCATCATTCCGGCGATCGAAGAGGTGCTGTCGGCTGGCGAACTGCCGCGCCCCGATCCACCGCCCGAGGCCGTGTCCACCGCCTTTCCCGACGCGCCGCCCTCCGGCGATCCGGGACACAGGTGAACCATGCTGGTCGTGGTCGTCTCCAATGCGCCGCCACGGTTGCGTGGCCGACTCGCCGCCTGGCTGGTCGAGATCCGTGCTGGCGTCTATGTGGGCGACTACTCCGCCCGCACTCGCGAGATGATCTGGGATCAGGTCACGGCCGGGCTCGAAGATGGAGATGCTGTGATGGTCTGGAAGGCACGTACCGACCAAGGCTACGATTTCCTCACGGCAGGGACGAACCGTCGGATGCCGGTGGAATTCGATGGGCTGAAGCTGGTGAGCTTCTTTCCCGATAAACGGGGTTGACGGCCGACCGAAAAGCCAACCGTTCGGTACGCTCTTTGACATCGTGAATCTTTCGGTAGATCAAGGGTCTGCAGCAAGA # Right flank : GCGCGCAGGTTTGCAAGGTAGTCGCGCGTGTCGGCCTACGCCCGGGCGAAGGTGGTCAACGGGCCGTTGCAGGGGATCAGGCGGACGGCCTCCAGCGCTTCGATCGCGGCAAAGGCCTCGAGCCATGCCGTGCTGTCGGAGAACTCCATGACACCGAGGAGGCGGCCGACATAGACGATGTCGCCGGTGGAGACGATGCGCGCGTCCGGCAGCCAGACGAAGCTGTCGCCTGGCGTATGCGCTGCTCCGGTGCCGCGCATGGCCAGTACTGCGGCGAGGCTTGGCCTGGGCAGAAGAAAGCCCGAAAAAAGTTTCAATTCCGATCAGTGGCTTGCCGGACAATTACGATTAACGCCCGGAGAATCTTTCTGGTGCAAGGGAGCAGAAACAACATCCTGCCTGGCCGGGTGATGACGCGGTTCGCGACAACGACATCAAGTACAGCAAAGACCGGCCCGGCCACGAAGATACGATGCCAGGTCCCGGTCAAGAAGGACGGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCCCGCGCGGGGATGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCCCGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 116888-117879 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLVM01000004.1 Rhodovulum steppense strain DSM 21153 Ga0310553_104, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 116888 29 100.0 32 ............................. CATCTGGACGGGGTCTGCGCCTGCGGGCGCTG 116949 29 100.0 32 ............................. CTCGATCGCGCCGGCGCGACGGTCCTGCTGCA 117010 29 100.0 32 ............................. TCGTTGATCGGCTGATTCCTTGCCGCCAGCGC 117071 29 100.0 32 ............................. TGTTTTGCATCGCGCTGACCAGCGTTTCGACC 117132 29 100.0 32 ............................. CCGACTGCTCCGCCGCAAGCTCGGCCATGTTG 117193 29 100.0 32 ............................. CGCGATGCACCGCCTCCAGCACGCGGAAAGCA 117254 29 100.0 19 ............................. CGATGCTCCCGCCGATTGC Deletion [117302] 117302 29 100.0 32 ............................. GGCGAAGGACCGCATCGTCCGCGTTTCCCGGT 117363 29 100.0 32 ............................. GCCAAGATGTATCGGGTCACTTCCTGCCGTTT 117424 29 96.6 32 ............................G TGCGGCGCGTGGTTCATCCCCGCGACGCCCTC 117485 29 100.0 32 ............................. GGGTCCGTCACGGCCACGTCAAGCAGCATCCT 117546 29 96.6 32 ............................G TCCTCCTGCACCGAAATGGACATGGTGTATGG 117607 29 100.0 32 ............................. ACCCGGTCGATCCACTCATCCGGCACCGCCTC 117668 29 100.0 32 ............................. CGCCCCACCGCTCCGCTGGCCGCGCCCGGCAC 117729 29 100.0 32 ............................. TGGGACATGGGCGTCCCGGTTCGGTTTTCCTG 117790 29 100.0 32 ............................. GTTTCCTGCGGCTGCCGCGGCCGACCGACGAG 117851 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 17 29 99.6 31 GGCTCCCCCGCACCCGCGGGGATAGACCC # Left flank : GGCCAGACAGGTTTCCGAGCGCCCGTCCGAGAACATCGAGCGCGTGACCCGTCGCCTGACCGGCACCGCGCTCAGCCGGGAGGGGATCATCCCCGCCATGATCGAGAGGATCAAGGCGCTGATCGAAGGACGCGAGACCTGATGCCGCTGACCATGATCGTGACCCGCGACGTCGAGATGCGCTACCGGGGTTTTCTGACCTCGATCATGCTGGAGATTGCACCGGGTGTCTACGTCTCGCCCGACATGTCGGCCGGTGTCAGGCAACGGGTCTGGTCGGTGATGACGGATTGGTGGTCGCAGCTTCACAGAGGCTCTCTGGTCATGGTATGGCGAGACAGCAAGGCCGTCGGAAATCTCAGGATCGAGACCCTGGGCGAGCCGTCCAAGCTGATCGTCGACGCGGACGGCCTTCTGCTCGTAAAACGAAAGTAAACGCGCAATCCACTCGCCCGACCGCTCTTTGACATTGCTGGTATTTCAAGGTATTGGACACAAGA # Right flank : CTGTCTCTTTACCCATGGTGGATATTTTCCATCGGCTTGGCTTCGAGATGGTCCAGTGCTCGGTGTATCTTCGCCATGCGTGGAGTCGGGAAAAGGCCGAATCCCTCGCGCGACAGGTCGGGGACTGCGTTCCAGAGGCGGGACATGTCCAGGTGCTCTTCTTCACGGACAAGCAATATGCGCAAAGCCAAGTCTTTCGTGGGCGGTCTTGATCGACGAATCCTGATGAAAAACCGCGCCACTTGGCCCTGTTTTGACAGCCCTCTGTTCAATTCTCGGCGGCAGGACACCAGAAAAAGCCCCGCGCAAGAGTGGTTTGCGCGAGGTATATCCTAGCAGAGGAAGCGGCGTGGCCAAACCCGGACCAAGTGGGCGGCAAAGGGCAACCCTGACTGATCTCGGCTCAGGAGGCCGTGTGCTTGAGCCAAGGCGGTACGTTGGCTGCCCGCCCCGGTTTTCCCCTTGACGGCCGCCCCCACCTCCCTTACCTAGCGCCTCGC # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCACCCGCGGGGATAGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 1 62349-61780 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLVM01000007.1 Rhodovulum steppense strain DSM 21153 Ga0310553_107, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 62348 36 100.0 30 .................................... AACGCCCAGCGCGAAGTTGCGGATGCCGTC 62282 36 100.0 30 .................................... CAGTTCCTCCATTCGGATGGATGCACAGTC 62216 36 100.0 30 .................................... GGTTGTTTCCCCTCCTATGACGTTAAATGC 62150 36 100.0 29 .................................... GCAAGCGGCATGACGAAGGGGGCCAGTTT 62085 36 100.0 30 .................................... CCAGCACAGTCACGGTCGTTGTGGCGAGCG 62019 36 100.0 30 .................................... TCCTGAAACGAGTTGCCGCTTCCCTCAGCG 61953 36 100.0 29 .................................... ACTCACGCCACGCCTGCCAGCCGCCCGAT 61888 36 100.0 37 .................................... CCGGTGCAGGCGTTGCCCCACTGGCAGGCCATGGCCG 61815 36 77.8 0 .........................A...TGGTCTA | ========== ====== ====== ====== ==================================== ===================================== ================== 9 36 97.5 31 GTCGAAGACCACGCCCATATGAAGGGCGACTACACC # Left flank : TGCGCCCTGGGTGCCCTGCGGCTTGGTCGCGATCCGGTCGAGCACCGAGATCCACTGCGCGATCACCAGGGCGTCATGGCTCTGCGCGAAGTCCGGTATCTCGTGGCGCGCCCGGGCCGCGGTATTGTCGACCAGAACCCGGGTCTGTCCGCGCTCTCCGCCCAGATCTGTCCGGCTTTCCCCGTAGGGACGAACGATCCGCATATCCCACCACCCCCTTCAATCACCACCCGGCCGAAATCGGCAGGGAAAGGAAATCGGGTTTCGGGTCTCGTATCAAGTCAGGCTTGCCGAAACGGAACGGCTGGCGTAGCCTCGAAGCAGCACTGGAAATCGGCCAGTCGCCCTTGGAAGATGATGAAACGTCTGGAGGAAAGGGAGAATTCGACGTTCTCGGCAAAAACGGATTAGAAAGCGGGCTGGTTCGATGCGCGTGCGCCGTTTTCTCTTGGAGAAAAGCCTGTTTTTTCCGACTTGCACCAATGCTTTGCGAAGAGTCA # Right flank : TGCTGCCCGCGCACCAGGCTTGAATGACATCTGAACGATGCGCGCGGAGGGGTTATGGACTTTTGGCCGCAAATCGTTAGATTGTGGTCAGAAGGGAATGCCCATGCTCCGACCCGTCGAAACACCCGATACCGCGCCGCAAGACGGCTACAGCCCGGACGAGATCGCCGCCATGCAGCGGGCGATCCTTGCGCTGATGGACCGCTGGGGCGTGCGCGACGAGGACGCCGCGCGGCTTCTGGGCGGCATCTCGGTCAAGACCTATCGCCGCTGGCGTGCGGGCGATTACGGCCGCGTCGCCCGCGACCTTGCCGACCGGATGTCAAACCTTCTGGGCATCCACAAGGCCCTGCGCATCCTGTTTCAGGACCCGGCGCGCGCCCATGCCTGGATCGCGAAACCCAACGCTTCCTTCGGCGGGGCCTCTGCGCTCGACGTGATGGTGCGGGGTGGCGGCATGGACGACCTTCAGCGCGTGCGCCGCTATCTCGACAGCGTGC # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAGACCACGCCCATATGAAGGGCGACTACACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-9.20,-9.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //