Array 1 116556-115929 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FBQC01000027.1 Campylobacter coli isolate H093100604, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    116555	    36	  83.3	    30	AACCG.T.............................	TCATTAACTTCTTTGATTATACACTTAAAG	
    116489	    36	 100.0	    30	....................................	ATGAGCGATGAGGAAATTATCGAGCCTGTA	
    116423	    36	 100.0	    29	....................................	ATTATACACAATACAAGCCAAGCGAAGAT 	
    116358	    36	 100.0	    30	....................................	TTAAGCCCATTGAAAGTATTGTATTGTTTT	
    116292	    36	 100.0	    30	....................................	AGAAAAAAAATGGAAGGTGTTGTCTTAGGG	
    116226	    36	 100.0	    29	....................................	AAATGATTTTGTTAGGGAAGTTACACAAA 	
    116161	    36	 100.0	    29	....................................	ACATAGGTTGCAATGTTATCAGTTATCTT 	
    116096	    36	 100.0	    30	....................................	TCCTTCTAGTTCTTTGATTACAATTACAGG	
    116030	    36	 100.0	    30	....................................	CTATATCACCAACTCTTAATTTAAATTGAG	
    115964	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        10	    36	  98.3	    30	GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT	                              	       

# Left flank :   TTATATCCTGCTCATCTTTCACTTGCTAAGTCTTAATCATAAGCTTAAAAATGATTATTTTGCTAGAGTTGCCATAAACTGCGTGGCATTGTTTATTTTTATTTATGCGGGGGTTAATATTTCGATGACTATAGGTTTTGCACCGGTTGTCGGTATACCACTGCCTTTTTTTAGTTATGGTGGAAGTTCTTTTACAATTTTTATGATTTTCTTTGGAATTTTACAACATTTAATCACTTTTAGATATTTTTGGACAGATAATAAAAACAAATAAAATAACTTTAAGCAAAGATAAGATATAATTCTATCTTCACAAATCAAAGGCGGATTTATAGCTCAGTTGGTTAGAGCAACCGGCTCATAACCGGTTGGTCGCAGGTTCGAGTCCTGCTAAATCCACCACTACTTTAGTTGTAGATATCTAATCCCAAAAAATGAATCAAATTAACTTTAACTACAAATAATCTATACCGTTTACTATCACCTTAAATTGAAATAGA
# Right flank :  AGACTTTGAACAAATAAAGAAAAATAGAGCTTTTTGTATACAAAAATGTATAAAAATATGCTATCATTTTAAAAGAGAAATTTAAAAAGAGACTAAAATAAGTGGTTTTCGGTTAGCCACGCAGGGTTACAATCCCTTTAAAACCGTTAAAATTCAAACAAACTAGCTTGTCTAATTTTATTAGACTTAGTTTGCTTGATTGAATATCAATATACTTTTAAAAGCTTCATCATAGGCCATGTTTTTTGCTCGTCTTTAAGGCAATATCTTCCCTTGGTTTAAAATCAGCCTTAATTTTTTCTCCAAGCGGGGTTATAATGTATTTTTCGAAAATTCTCAATCCCTGAATTCCTATTTTTTTAGCCTTTACATTTCCTTCTTCTGCATTTGTAAACAATAGCCTTTGATTGTCTGTTAAGTTTTCAAATTTATTATCATGTTTTTCAACACAAATACTTGAGTTACTGATATCAAAACCATTATAATAAGCAAATTCGGGT

# Questionable array : NO	 Score: 6.17
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:80.56%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [80.0-76.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.41,4.5   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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