Array 1 87303-85645 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHXCI010000011.1 Prevotella histicola strain SCHI0028.S.1 Contig_11_pilon, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 87302 47 93.6 30 A........C............A........................ AATGGAAGATTACGGAAAATCTTACCTTCT 87225 47 100.0 30 ............................................... GCATATCCTTGGCTCTCTTGATACTGTTCC 87148 47 100.0 30 ............................................... TTTGCTCCAGCCTATACAATTAGCCACCAC 87071 47 100.0 30 ............................................... AATTTGCAAAAAGATACACAAGGGTTATTA 86994 47 100.0 29 ............................................... ATATGAATGAAATAAATTTGATAGCAAAC 86918 47 100.0 30 ............................................... AGCCATTGCGAGACAACTCCCTGATACCCA 86841 47 100.0 30 ............................................... CAAATGAAATATAACGACATAAGTAGCTGA 86764 47 100.0 30 ............................................... CTCCGAACTCGCAACAGAGGAAGTATTTAT 86687 47 100.0 29 ............................................... ATTTAATTATTAAATACGAAGCAAATATA 86611 47 100.0 30 ............................................... TCCGTCAGTTCCTTCATACCCGTATAGCCA 86534 47 100.0 29 ............................................... CTCCATTCACCTTGAAGTAGACCACTTTG 86458 47 100.0 30 ............................................... CTTGACAAAAGTAACTATCAGGGTATATTG 86381 47 100.0 30 ............................................... TGCTGCATGATGATATAGTTGCCTGATGTA 86304 47 100.0 29 ............................................... AGTACTAACTGCAGAAGAGATACCTTGTG 86228 47 100.0 30 ............................................... GTAGCACGTACGAGCATATTAAGCGAAGCA 86151 47 100.0 30 ............................................... TTGCTTATCATAATGGACAAGCATGTCTTG 86074 47 100.0 29 ............................................... ATGCAGAAGAAAATGGAGCAGAGAGGGCA 85998 47 100.0 29 ............................................... GCGTGTAGAAGATTTCACGCCCGAAGATT 85922 47 100.0 30 ............................................... AGTATGACAACGCAAACCGTTACACGTATT 85845 47 100.0 30 ............................................... ACATTTGAAGAAACTGCAAATACAGAATTA 85768 47 100.0 30 ............................................... CCTCAACGGGCACAGGAGGAACGAATCTAG 85691 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 22 47 99.7 30 GTTGTGATTTGCTTTAAAATTAGTATCTTTGCATTATCAGACACAAC # Left flank : TAGCAATAACAATAATTATATATAGTAGAACAAATCTACCACTACGTAAAAGAAGAAAAGGGGGATAAGAAAAATATAAAAAAATAAGGCCGCTAAAGAACGACCTTGGGCGGTACACGATCTTTCGACCCTGTCCCTAAACCATATTACTATGATCTGATGCAAAGGTATATAATTAATATTAAACTCCAAAATCTAAATCTCTTTTTAAAGTTAATTAGCATTAAAAAGCCCGTTGTGATTCGCTTGAAAATACGTACCCTTGTGGTAGCAATAACAATAATTATATATAGTAGAACAAATCTACCACTACGTAAAAAAAAGAAAGGGGGATAAGAAAAACATAAAAAAGTGGGACGCTTAGAGCGCCCCTTGATGGTACACGATCTTTCGACCCTGTCCCTAAACCATATTCTTATGATCTAATGCAAAGGTATATAATTAATTTTATACTTCAAAATATAAATCTCTTTTTTAAATTAATTAGTATTAAAAAGCCC # Right flank : TCAAGTAGCGTAAGAAGGTGGTTATCAACACTGTAACACCTACTTTGAGAAAAGAAAAAATGCAAGTAAAAATAAAGTTCCACCATTAGAAGTGGAACTTTATTTATTTCTAAAACAGCTCTAATTGGACTCCAGGAGCATTTGGCTTATGCGGTTTCTTGCCATAAAAAAGTTTAATTTCTTCAAACTGTTTATCAGTTATACTCATTATTCCAACTTTCCCATACACAGGAATAATGGTTGACACCCTCTTAATATGCACTTCCATGTTTTCTTTACTACCACAATGGCGTATGTAAATAGAGAACTGGAACATTGTAAATCCGTCTTTTAGCAAGTTCTGACGAAAGAGTGCAGCAGCCTTTCTCTCCTTCTTTGTATCTGTGGGTAAGTCAAAAAACACCATTAACCACATACTCCTATATTGACTAAATCTATAAGTTTCCACTGAAGGGGATTATAAATCAGGATACAATATTCTTCTTTGCTCACCATTAAAG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTAAAATTAGTATCTTTGCATTATCAGACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA //