Array 1 68946-68061 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABS01000024.1 Edwardsiella anguillarum ET080729 24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 68945 28 100.0 34 ............................ TGGACTATGAAGCGGTAGAACGCTGGGTCTGTGA 68883 28 100.0 34 ............................ CCCCGTAAGTCCATTAATGATCACAGAGCACCTA 68821 28 100.0 33 ............................ CGTTTCAAAGTCGAGGGTTTCCACCGTATCGGG 68760 28 100.0 33 ............................ CCCTGCATCGGTACATGACAAAGACTGAAGCGG 68699 28 100.0 33 ............................ TGCCTTCAATGGCCGCCGCATTCTCTTGACCAG 68638 28 100.0 33 ............................ TTCGGCCTTAGCCCTGGCAGCGGGCAACGTAGA 68577 28 100.0 33 ............................ TGTCTTATCGGTGGCACCGCCAGATGCTTCCCG 68516 28 100.0 33 ............................ CGATTGTCCCTGATGCCGCCAACTCTTTCCCAT 68455 28 100.0 33 ............................ TGGCTATGAAAACGTGTTCCCGGTGTATGGCTC 68394 28 100.0 33 ............................ TGCCGATGTATTCGACGTTGTATTTTTCGGTAA 68333 28 100.0 33 ............................ TGACTGCGTAGATAGAGCACTGTGCAGCATCGA 68272 28 100.0 34 ............................ CTACCAGCCAGCCCGGACAGGTCCAGCTTGAGGA 68210 28 100.0 33 ............................ CTTTATTCTGGGCCGTAGCGCTGCTGGAACGCT 68149 28 100.0 33 ............................ TAGCCCGGAAGGTTGGGAGAGTACGCTATGAAA 68088 28 92.9 0 ..C........................A | ========== ====== ====== ====== ============================ ================================== ================== 15 28 99.5 33 GTTTTCCCCACGCCTGTGGGGGTGTTTC # Left flank : TTGTCGTGGCGCTTGATGAAGTACTCGGCTACAGCCTGAGAGGTGGTAACAGCTTTGCCATCGTGAATGGTTACACTGGGGGTGTGTACAGAAAGCCGATGAGTCATTTTTCTGTGTCCTACGTATATGTTCAAATTTACCCTGTGTTCAGCAGGGCGGTCGGGTACTTGAACACCGTACGTAGTCGGCCAGCAGTTTTTCCCTTACGGGTGTTGTATGGTCTGCTCGCTACCCGGCCATATCTGAAAGTATGGACACAAAAAAAACCGCATTGCTGTCGGGTGCGGAGGCCGCTACGTAAGGTGTGTTCAGCACCTGAGCGGACTATACTCCCGGCATCGCGGGTAAAACTAATTTCGATTTATGATACTTTACTTACAAATCATAGGAATTCAATGAATCATTCTAGCCTGACCATACAGAGCCCCATCTGGCTATTCGACCAGTAAACCAACCACAATCTGTAGCTGGTTTAGTATGTTCTTTAACAATATAATGGG # Right flank : ATAGGAAACTGACCGAGTCACATATCAAGGCCAATAAAACCAGGCTGCTGGCTATGTGGCAATCAGCGGCGCGATTTTGGCTATCGTGCGGGAAAATAACGCACAGCTCGGTTAAGGGCTTACTGTGCGCCGTCAAGCGCCGCCCTTCAGAGCGGGGGGATACTCACTCTCATCACTAGGATCACCACTGATGAAGGTACTGGCCTCCTGAAACGACCGGAACACAGGTCATTTAGTGATATCCATCTAACTTACTGAAATACAACTAATCGATATCAAATAAAGATCGAGGGAATCCATTATTATTAGGGAGCCCCATAGCGGTTAAATTACACCCAGGCAAACGAGGTTTATCATTATCAATAAGATCGGCAATATTTCTAATCCATTTTGAGCCAGGGCCGATTTTTTTCACCAAAAACCATAGCACAGCTATCATCCCATACATTCTTTCGTAGGCATCATCATTCATACTCAATCGCTCAAAGTATGGGTAATTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCACGCCTGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 154-3 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABS01000052.1 Edwardsiella anguillarum ET080729 52, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 153 28 100.0 33 ............................ CTCGGCATGATTACCGATAGCGATAAAGCTGCT 92 28 100.0 34 ............................ TTCCGGGCAGGACGACCACTTCACGGCTGATGTA 30 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 3 28 100.0 34 GTCTTCCCCACGTCCGTGGGGGTGTTTC # Left flank : GAACCTCTGTATCGATCTTGCCTTCTCCCTGACGCGTGAGATGGCGGGTCGTTATGAGAAGGCTCTGGTTTCATCTCGTTTTCGAGAGCGGGTGATAGAACTGAATTTGCTCGCGAGTGTAGCCAGAGATATACCACAGCTACTTGGAGGGGCAAATATTGATGCTGATAGTGCTAGCTAACGATTTACCTCCAGCAGTTCGAGGACGAATGAAACTTTGGTTTATTGAACCGCGGCCAAATACCTTCGTTTCCGGTATCAAGGATTCGGTTGCTGACACAGTGATCGAATACCTTTATCAACACTGCTCACCGGCAGCGGGTGTGGTGATATTTAAAAGCATTGCTAGAACACCGGGATATCAGATCCATACCATAGGATCACCGACTAAGACGCTCTGTGAGATCAATGGCCTGCAGTTGGTGATAGAAAAGCGACTCGAGCAGTAAGTTAACCACAATATGTAGTTGGTTTAGTATGCTCTTTAACAATATAATGGG # Right flank : CTG # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGTCCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [1.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //