Array 1 823834-823571 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP060607.1 Staphylococcus aureus strain K275 chromosome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	=============================	==============================	==================
    823833	    29	 100.0	    29	.............................	CAGAGAATTTCGAAAAGAAATTCTACAGG 	
    823775	    29	 100.0	    30	.............................	CNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	
    823716	    29	  96.6	    30	......A......................	AAGAGAAATTGGATTCCCAATTTCTACAGA	
    823657	    29	  96.6	    29	......A......................	CAGAGAATTTCGAAAAGAAATTCTACAGG 	
    823599	    29	 100.0	     0	.............................	|                             	
==========	======	======	======	=============================	==============================	==================
         5	    29	  98.6	    30	CAATGCGAGTTGGGGTGTGGGCCCCAACA	                              	       

# Left flank :   GTTCCTTACCTCTTAAATCAATTGCAATTGCCACTTTTCTTAAGGATGGATTTCCTTGTTCCATCAACTCTACAAATTTAGGCAATAACACTGGTGGTAGATTATCTACACAAAAATATCCCATGTCTTCTAAACATTGAATAACCAAAGATTTACCTGCGCCAGATAAACCTGTTACAACTAATAGTTCACTTTTACTTTTTTCTTTTTCATTATTATCCATTATTTTTTCACCGCCAAAACGAATTTCATGATGTTAATTTAAATGTTCTATGACAAAATTAAGCAACGATGTTTTATATTTATTTCCAACTATGTCTAGATTAAATTTCTAAAAATATACATCATTTAAAAGGAGCTTGGGACATAAATCAATGTCCTAGGGTCTATAATATTATATTGCTAGTAGTTGACTGAATGAAAACGCGCTTACAACAAGCTTTTTTCAACTCTAGTCAGGGGCCCCAACACAGAGAATTNNNNCTTCCAATTTCTACAGG
# Right flank :  CAGAAGCTTACGAAAAGTCAGCTTACGATAATGTGCAAGTTGGGGTGGTACAACGATAAAGTAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGTGGCTAATGTTTAAGAACCACTACATAATAAATCATTAGTGGCTCTTTATCATTTCTGTCCCACTCCCATAAAGTTATAAGTTTAATATAACATATAAAAAAACTAGAACTCATTGAAACGCACAAATGATACGTACTAAGTTCTAGTTTTCTATATAATTTGCTTTAATTTAAAAGTAAGACATTACTTTAACGCTGTGATGACACTATTAAAATAAATATCCAAATAATTTACAGCTCAACATCTTAATTCGACTTCGAATTAAGCTTGATCGTTTAAATGTTCAATATATTCCGCTGCACTTTGCGCTGCAATACTACCATCGCCAGTAGCAGTGACAATTTGGCGTAAACCTTT

# Questionable array : NO	 Score: 2.79
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CAATGCGAGTTGGGGTGTGGGCCCCAACA
# Alternate repeat :   CAATGCAAGTTGGGGTGTGGGCCCCAACA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-3.10,-5.60] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [58.3-53.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.74   Confidence: HIGH] 

# Array family : NA
//