Array 1 7-2556 **** Predicted by CRISPRDetect 2.4 *** >NZ_WXWD01000409.1 Vibrio sp. V26_P1S5P106 scaffold381_size2772, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 7 28 100.0 32 ............................ TTTTTTTAATTACATGCTGGTTATATATTTAT 67 28 100.0 32 ............................ GGTTCCGGCTGTGTCGTTGGTTTTGAGTTTTT 127 28 100.0 33 ............................ CCGTATTACTACACGGGGATGCATTGCTATGCA 188 28 100.0 32 ............................ TTTGTGGGCGGTGCCGATTGATGAAAGCGCCG 248 28 100.0 32 ............................ TCACGGGCCAAGGCATTGGCCACGGTGTCCTT 308 28 100.0 32 ............................ GTATAGTAATACGGGGTGAAAGTCCCCACCCC 368 28 100.0 32 ............................ GACTAGATAAATTAACGGCATCGTGAGAATCC 428 28 100.0 32 ............................ AGTAATGCTAGTTGCTCATTTTTACGAATTAC 488 28 100.0 32 ............................ TAAGTCATGAGCAATTTGTTTGTATTGAACAT 548 28 100.0 32 ............................ CATCATCATCAGTACGTGTAGTATGACCAGTG 608 28 100.0 32 ............................ TCGCTAAAAGCAGAGCATCAACAATAGTATTT 668 28 100.0 32 ............................ AGGCACTGGAAAATCATTGAATGCAATAAAAT 728 28 100.0 32 ............................ GAGACGTCGAAGAACTACCACCGCCCTCAAAC 788 28 100.0 32 ............................ GTGATGCTTAGGAAAGAGAATCGCTTAACAAG 848 28 100.0 32 ............................ GCCGGCACCATTGACGGCTGGGAAAAATTGTC 908 28 100.0 32 ............................ CGATGGCGGCGATGTTCAGCTCTTTATCGAGC 968 28 100.0 33 ............................ TTTGGACGTTCTTCTAAATTCTGATTCTTATTT 1029 28 100.0 32 ............................ TAGCAATGGATAAAGCGAAAAGCTACGAAGCG 1089 28 100.0 32 ............................ TCCAAATCAACATGACAATTGTCATAGTAAGC 1149 28 100.0 32 ............................ TTGTTCGGCATCACGCATTAGCGTAGCTAAAC 1209 28 100.0 32 ............................ GCTGTGCTTGTAAATGCCGTAGGGCCGCGAAC 1269 28 100.0 32 ............................ ATAATGGTTAGCCGTTCATTACACGGATAATT 1329 28 100.0 32 ............................ GTGCCGACTCAGGTGGAGCTGTTGGAGTCGGA 1389 28 100.0 32 ............................ GCATCATGCAGCAATGCCGCCCAGCGGTGTTT 1449 28 100.0 32 ............................ CTGCGCGGTGCGTTTGAGCAGGATGGGGAAAC 1509 28 100.0 32 ............................ GCCTGAGTTATGCTCGACCGCTTTGCGATAGC 1569 28 100.0 32 ............................ TTTTGAGCGCATACCGCAAAAAATACCCGCAA 1629 28 100.0 32 ............................ GTGACGGACAATATCTTTGGCAGCATTTTTTT 1689 28 100.0 32 ............................ CCGCCTTTGTTCAGCACATACTTGAGTGATCT 1749 28 100.0 32 ............................ TGTTGCTCCTTGTCTCGCCTGGTTAACAACAA 1809 28 100.0 32 ............................ AATTTTAGGTACTTTATCTAACGCTTTACGTA 1869 28 100.0 32 ............................ ATCGAAGAACCTTCCCATCGCCCACCTTGAAC 1929 28 100.0 32 ............................ TTTTTTATCAGGCACAGCGGCTTTTGGGATTT 1989 28 100.0 32 ............................ TGGTACTGGCTCGCTGCCGTTCGGCGTCAGAC 2049 28 100.0 32 ............................ TATCAGGAATCCCGGTTCCGCCGGGGCGGTGC 2109 28 100.0 32 ............................ AATTGTTAAGCTTAATACGTACAAAATACTCG 2169 28 100.0 32 ............................ TTTTCCACCTTCTGACCGTCCTATTTCGTCTG 2229 28 100.0 32 ............................ TTCACATGCGCGTTCATCGGTATTTGGATCAC 2289 28 100.0 32 ............................ GTATTTTGAACCATCCCAAGAAATAGACCCCA 2349 28 100.0 32 ............................ GTTCCTTGGTGTTGATGCGAGCGATAGGGATA 2409 28 100.0 32 ............................ TTGCAAATAATCAGGTACTTTAATCACTTTTG 2469 28 100.0 32 ............................ TCGATGATCTCTCAAGGTTGGACTGATGAAAC 2529 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 43 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : ACACTTG # Right flank : TAACGGTAAGATTTACGGGATACCTTCCAACTGTTCACTGCTGTCACCGATCATGCAAAACTGATCCACTAACGATCATCGAAAACTGATCCACTTGGTATCATCCGTTTATTTTTTATACGGGTGATTTATGTTAACCAAGGAGACATTTGTGGATATTCATGTTCGCTTTGCACAAGGCCAAAGCATTCGTAACATTGCCCGTCAATTAGGCAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [6.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 88-3935 **** Predicted by CRISPRDetect 2.4 *** >NZ_WXWD01000234.1 Vibrio sp. V26_P1S5P106 scaffold235_size4561, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 88 32 100.0 34 ................................ AAGTCGGACTACCTAAGTCTAGAACAACCCGCCA 154 32 100.0 34 ................................ TAACCGGACAGTGACATGAAAAAAAACCAACTCG 220 32 100.0 35 ................................ AACACGTACCACTGTCGCTGCTCATCATCGATAAC 287 32 100.0 33 ................................ TGGCCATGTCCCAATGACTTGCGGCTTGTAGCA 352 32 100.0 33 ................................ CAGATTGGATCGCATCTTGCCCGTAAACCGTTT 417 32 100.0 34 ................................ AAGCTCAATATCATCAGAAAAGTAATCTGTAGCG 483 32 100.0 34 ................................ TGTAAAAAAGAGTATGAATTATGGGAAGTCAACT 549 32 100.0 34 ................................ TTGAACAATCCGCGCTCTGTGGCCAGCTATCCAG 615 32 100.0 34 ................................ GCTTGCGAGGTGTTTTTTGTGTTCGGAGGGGATG 681 32 100.0 34 ................................ CAGAAGGCTTTAAGCCTGCCAGCCTAAAGCCATT 747 32 100.0 34 ................................ TGGGTCGTGAAGGCTCTAACGTTCGGGAAGATTA 813 32 100.0 34 ................................ TGGTGTTGTTCGCCTGCCGCTATCTAACCCGCCA 879 32 100.0 34 ................................ ATCTGACGCATCACATCGAGCATCCAGTAAAAGT 945 32 100.0 34 ................................ TCTGGTGTCGCTATCGTTCAGATCGCACAAATAG 1011 32 100.0 34 ................................ ATTAATTTTAGGCGCAGCAAAGCTTGCGCTCGAT 1077 32 100.0 34 ................................ CAATACCAACTATAAAGCCGTCGAAGTGCTTGTA 1143 32 100.0 33 ................................ ATCTAAGCGTAGGAGCATAGACGATGAATGACC 1208 32 100.0 33 ................................ AGTATCAAGAATCAGCAAATCCAGCGTGATTTT 1273 32 100.0 33 ................................ GCGCTAGGCACGCGCCCAATACCATCGTGCGCC 1338 32 100.0 35 ................................ ATCATCGATTTGATAGACAGTTTCATCCGCTCCAT 1405 32 100.0 33 ................................ TTTGTAACGACGCGCCGCTTGATGAGCGTCATC 1470 32 100.0 35 ................................ ACATGTGCCTAGATCGGCAGGGTGAATAATAAAAT 1537 32 100.0 33 ................................ AAAGAAATGATGCGCTTTTGTTGAAAGGGTTTC 1602 32 100.0 33 ................................ TAGCTCGTTGAAGCTGTAAATTCTGAGGCCACC 1667 32 100.0 34 ................................ TAAAACCAATATAAGGCGTCAGCAAACACCTAAG 1733 32 100.0 34 ................................ CTTTAAACCTAGCCAACCTTTGCCCCTGTTGTAT 1799 32 100.0 33 ................................ CAGCAGTAAGGCTAATAAGGAAATAAGCATGTG 1864 32 100.0 34 ................................ AGCTTGAAAGCCGGAACTCGCTTTGTTGAATCCA 1930 32 100.0 33 ................................ AACAAACTCAAACGCAAGGTGACGCTAAATCAC 1995 32 100.0 34 ................................ AAAACCTTGAGGTTTACTGCTCCGCTTACGATCA 2061 32 100.0 34 ................................ GAATTTGCTGGCCAACATTCACTTTAGGATACAG 2127 32 100.0 34 ................................ TGTTTAAGACGCTGAATTGCAGAAAGTCCATTTA 2193 32 100.0 33 ................................ CCAAGATGCTGGCTGTACAAGCGAGTTCATTTC 2258 32 100.0 34 ................................ TCAAACAACGCAAGAGTCCAAGTTCGTTTAGCAT 2324 32 100.0 33 ................................ TTCAGATCACGCTCAAGATAGTAATCGCACTCA 2389 32 100.0 34 ................................ AATCGTGACCACATAACGCCACTGCTTGTCTGGG 2455 32 100.0 35 ................................ AAACCCCAAGAACCGGTACAAGACTGGTGCAAATT 2522 32 100.0 34 ................................ CCAAATGGTTATAAACAAGGGTATTAAAGTCAAC 2588 32 100.0 34 ................................ CTGTTATTTTCTCTTGGTTCACTTTAAAAAAAGG 2654 32 100.0 33 ................................ GCTTGCAGTTGTTCAACTTTTTCAGAAAGCGGC 2719 32 100.0 35 ................................ TAGAGAGTCGTAACAAGCCAAGGCTTGCACGATAA 2786 32 100.0 34 ................................ AAATTATATATTAGGAGGCCCATAATGGGTTGTA 2852 32 100.0 34 ................................ TGCAGGTTCTATTTTGGTATAGACGTGGAATTCA 2918 32 100.0 34 ................................ AAGGCCAAGTTTGCGCGCCGCGTTTTCAACGCGT 2984 32 100.0 33 ................................ CTTTGACTAGGTTGGTTAGTAGCCCTTCGGTAG 3049 32 100.0 33 ................................ TCTAGCGCTTCGCCACTGAAATAGTACGTTGCG 3114 32 100.0 34 ................................ ACTTGCTCGCCATTCGATGTCCACACCTGGAATC 3180 32 100.0 34 ................................ TAATAATGCCGTTGAATTGCTTGAAATAAAACTC 3246 32 100.0 34 ................................ TCGACTATTAAGTTGATTATAAAAGAGATAATTA 3312 32 100.0 33 ................................ TTGCAGCAATTTACCCGTTTCTGCCTGAGCTTT 3377 32 100.0 33 ................................ ACAGGATCGAGCGGCAGTATCAGAGTTAGCGCA 3442 32 100.0 33 ................................ CATCTGGCTCTCCGGAGCAGGGATTGCGTGTGA 3507 32 100.0 36 ................................ ACGCTCTCTAGCTCGCTCTAAACGCCAGCCCAGTAA 3575 32 100.0 34 ................................ TCGACTTGCAGCTGGCGAATAGTCCAGTAGCCCC 3641 32 100.0 34 ................................ TCAACACGAGCACGTTTTGAAGATGAATGGAATC 3707 32 100.0 33 ................................ AGCAGAGCCAGGCAACGCGAGAGCAAGAAAGCA 3772 32 100.0 34 ................................ ACCCCAACCGCGCTGCTAACCAGCTTTTGCTGCC 3838 32 100.0 34 ................................ ATCCTCAGCGACGGTCAGGCCGTCAGTGTGGTGT 3904 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 59 32 100.0 34 GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Left flank : TTCACTCAAAATAGTTTTCTTCTACCCAACAAAGTTAGCGGCAAACCATAATATATGCTAGTTTACACGTGCCTTTCACAATAGGCGG # Right flank : CGCGCTTTATTGTCAACTTGCAGATCAACCAAACTGTCAACGATCACCGAAAACTGATCCACTTTTAGCTTAAAAACGATCAATCAAAATTGATCCACCCTTTTACTCAGGTATTGCTCCTGAGCGTCGTTTATCTTTCAATCGATAACTATCACCACTTAACTGCAAAACATGCGAGTGGTGAAGCAGTCGATCTAACATCGCTGCCGTTAATGTCGCATCATCGGCAAATGCGCTAGGCCATTGGCCAAACGATAAATTGCTGGTCAAAATAATACTGCCATACTCATAGCGCTTAGCGATCACATTAAAAAATAGGTTGGCTTCTTCTCGCCCAAACGGCAGGTAACCGATTTCATCAATGATCAATAACCTTGGAGCCATCACAGAGCGAGAGAGGTATTGCTTCAGCTTGTTTTGTCGCTTAGCGGTCGATAATTGCAGCATCAAATCAGCGGCGGTGATAAAGCGCGTTTTCTTTTTAGCTTGTACGGCTTTGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 1 6844-6286 **** Predicted by CRISPRDetect 2.4 *** >NZ_WXWD01000246.1 Vibrio sp. V26_P1S5P106 scaffold152_size7022, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 6843 32 100.0 33 ................................ TGTAAGTGGACTGGCGATTTAGGAGATAAAATG 6778 32 100.0 34 ................................ TGGTGCAAGCGATGGGCAAAAAGCCGTTGATAAG 6712 32 96.9 34 ............T................... CTTCAACCCAATGCCTCCTCTATCATTTTGATTG 6646 32 100.0 35 ................................ CTCTGCAGAAACATCCCAAGCCACAGACATTTTTG 6579 32 100.0 34 ................................ CCCAAACTGATGCAAGACCTTGACGGCGGAGTGA 6513 32 100.0 34 ................................ AATTGTCTGTTGTATTAGCCTGCCGTTTTCGTAG 6447 32 100.0 33 ................................ AATTGTGGGCTGTGAACTATCCCACTTGAATCC 6382 32 100.0 33 ................................ GCATACTCACTGATTTGCCATTTTCCGTTTCTG 6317 32 96.9 0 ...............................T | ========== ====== ====== ====== ================================ =================================== ================== 9 32 99.3 34 GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Left flank : ATGCCTAATTGACGGGCAATGTTACGAATGCTTTGGCCTTGTGCAAAGCGAACATGAATATCCACAAATGTCTCCTTGGTTAACATAAATCACCCGTATAAAAAATAAACGGATGATACCAAGTGGATCAGTTTTCGATGATCGTTAGTGGATCAGTTTTGCATGATCGGTGACAAAC # Right flank : CCGCTCCGCGGGGGTAACTGGAATAATGGCTCGGGTCGCGCCTCCTACAGGTGTAAGATTTGATCGATGACGTGGCGGTTTTCCTCATGGCAATTTTGTGATGAGCGATTTTTTTGTCAATATAGTCACTTAAATCATGTTTTTATCGACTATATTAGAATTGGTTGTTATCCTGTAACGCTTCACATGGCGGTTAATATCATTAGGTGTGGGGCGATGGGATCACTGTTGGAAGTGAAGCAACTGGGTACGTATAGCCAACAAGGTTGGCAAGCATTAGTTACTGCGTCGTTTGAGGTTGATAAAAATGAATGTATCGCAGTTATTGGGCCGAACGGCAGTGGTAAATCGAGCTTACTTAAGTCGATTACTGGTGAATATTTGGCTGTTCAGGGTGAGTTACGTATTGATGGCCATAAACTGAGCGACTTATCTCTCCAACAAAAATCCAAATTAATTGCTGTAGTCGCACAAAATGATTACGTCGATCCTCGTTTAAC # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA //