Array 1 981467-980124 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHSPY010000001.1 Streptococcus equi subsp. zooepidemicus strain SEZ_19-051 tig00000001, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence           	Spacer_Sequence                          	Insertion/Deletion
==========	======	======	======	==========================	=========================================	==================
    981466	    26	 100.0	    39	..........................	CATTAAGATATAGATCAAAAGCGTGTTGTAATCGTCTCG  	
    981401	    26	 100.0	    39	..........................	CTCGCCAGATGCAAAAGAGACGACATCGTTAGCGTCTCG  	
    981336	    26	 100.0	    39	..........................	TTTTGGTAAAGTGTATGTGTTACCTTGTTGAGCGTCTCG  	
    981271	    26	 100.0	    39	..........................	CATATTTTTCACCTTTTTTAAAATCCACACTCGGTCTCG  	
    981206	    26	 100.0	    39	..........................	AAAAATTATTAGGCACAAAAGACATTACCCAATGTCTCG  	
    981141	    26	 100.0	    39	..........................	TGCTGACCCAAGCCAAGTGGGACATAATACTGGGTCTCG  	
    981076	    26	 100.0	    41	..........................	TGATGAGCGTGTATCTTCGTTTGCAACACCATCTTGTCTCG	
    981009	    26	 100.0	    41	..........................	AAAAAATCAACTAGCCACTGGTTTCCTTTACGAACGTCTCG	
    980942	    26	 100.0	    39	..........................	AAACTCAGCAATAGCTGATAGGAGGGTCAAAAAGTCTCG  	
    980877	    26	 100.0	    41	..........................	TCTTGTCTAATATCGTTAATAAACTGATGTCCGTAGTCTCG	
    980810	    26	 100.0	    40	..........................	TTTTTTGAAATTTTTTTGATAAGCTACAGCGATTGTCTCG 	
    980744	    26	 100.0	    41	..........................	GACTGTTACCCTAATAATTTTTTTAGTTGTGGTTGGTCTCG	
    980677	    26	 100.0	    39	..........................	ATCTTTGTGATCAGTCACTAGTAAGATCGTTAAGTCTCG  	
    980612	    26	  96.2	    39	...T......................	CAATCTATCAAGAGAGCGCTAGACTAGTTACTCGTCTCG  	
    980547	    26	 100.0	    41	..........................	TAGTCAGTCTCCGCTAAGGCAGGAGACAAGCCCAGGTCTCG	
    980480	    26	 100.0	    39	..........................	ATTTAGCAATCCTCCGTTATTTGCCTAACTTAAGTCTCG  	
    980415	    26	 100.0	    40	..........................	TGGATTTAACAAGCACGAACGGGTGCACAATCTCGTCTCG 	
    980349	    26	 100.0	    40	..........................	TACGATTATCATTTAAATACTAAAAAAACTACAGGTCTCG 	
    980283	    26	 100.0	    41	..........................	CACATATAGCGGAACAATCGGACGCTATCATGGAGGTCTCG	
    980216	    26	 100.0	    41	..........................	CCGACACTGCGAACTAATCATTTGTGACTCCTTTCGTCTCG	
    980149	    26	  88.5	     0	...TT.G...................	|                                        	
==========	======	======	======	==========================	=========================================	==================
        21	    26	  99.3	    40	CCCCATACGGGCGAGTGGATTGAAAT	                                         	       

# Left flank :   ATTCGAGGGGATATTGATAGCTACCCACCTTTTATGATTTAGGAGATTACTGATGATGGTATTGGTTACCTATGATGTGAATACAGAAACAGCATCAGGGCGAAAACGGCTACGTCAGGTAGCAAAATTGTGTGTTGATTATGGCCAGCGCGTGCAGCATTCGGTCTTCGAATGCTCGGTAACACCTGCTGAATTTGTTGAGATCAAGCATAAGCTGACGACGATTATTGATACAGAAGTGGATAGTATTCGTTTTTACTTGTTAGGAAAGCACTGGCAAAATCGTGTCGAGACGCTAGGGCGTTCTGATAGCTATGATCCTGATATAGGTGTCCTACTTCTGTAAAAGGAGTGAGTGCGAGCCTGAGTCACTCATAAAATGCTAGGAGACTCGCGCTAAAATAAGCTAAAAAAATAGAGAAATGAGAGGTTATAGCTAAATATGTTATTGGCTAGCCTATGTCAGTTCTCTATAAACTGTGCTATGCTGCGCAGTCTCG
# Right flank :  TTTGCTGCTATGCAAGGAGTGACACTGATTGAAGTCGCTCTCTTCTCGAGGGCGTGGTCCGTATCCCTGGTACTTTTCATGAAGGGATAAATCATATCACATTAATCAAGTTGATTTAAGTTTTTTATGGTACTATGTCAAATAGATAAAAATCTCTGTGTCAAGTGTAGTGGGTGACTGATAACTAAGCACGAGAGGAGACGAAGGTCGTCTTCTCTTTTATGATGTTCAAAGCAAGGTAAATACTTTTCTTGAAGTTGTCAACGTTTCTGAATCCAAAAGCATTGCGCTTGATACCTTTGATAAATTTGTTAGTTGCTTCAAGCTTGGCGTTAGAATAAGGCAGTTCAATGGCATTGATGATATAGTCGTTATAGCGTATAAAGGTGTTTAAAGTCGTTTTGAAGGTGTGATTGAGATGAGGCAAAGCATCTTGACTTAACCCAAAGAAGAGCTCTGTCTTCTTTTCTTGCAAGTGAAAAAGAAGTCATTGGTACAGA

# Questionable array : NO	 Score: 9.22
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CCCCATACGGGCGAGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [7,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched CCCCATACGGGCGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-7.80,-6.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [3-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [46.7-60.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,9.68   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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