Array 1 4386221-4384724 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP063242.1 Pectobacterium carotovorum strain XP-13 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4386220 29 100.0 32 ............................. CCGTAGAGCAACGTGAGTTACAGCATCAGGCC 4386159 29 96.6 32 ............................A TGCCCTGCAACCGTTCCGTCAACCAGCCAATC 4386098 29 100.0 32 ............................. CGTGTGGAAAATGCTGTTTGCGTTATCCACGG 4386037 29 96.6 32 ............................T CTCCCTCCCCGCTCTGGGGAGGGAAGAAAGCC 4385976 29 100.0 32 ............................. AGTCAATAGGTAGTTCATGCAACACATTTAAC 4385915 29 100.0 32 ............................. TGACGTCATCAACGCCTTTGAAGTATTTTTTG 4385854 29 100.0 32 ............................. CATCTCACCGTGTTTAATCAAAGCGGGGAGCC 4385793 29 96.6 33 ............................A GAAAATCGCACATGAATGCCGAAGATAGACCGC 4385731 29 96.6 32 ............................T TTTAACAGTATAGAAAAATGCGATCGTGGCAC 4385670 29 100.0 32 ............................. GCTGGCCAACACACCCAAAAACAGCATGGCTT 4385609 29 100.0 32 ............................. CGATACATGGCTTTCCATAGTCGCGCCAAAAT 4385548 29 100.0 33 ............................. CATTCAGCCATTGCCACGAAGGAAAACGTGATG 4385486 29 100.0 32 ............................. GAACATCCCGTTGCGGATCTGCTTGGATTTGG 4385425 29 100.0 33 ............................. GGCATGGGACTTCCGAAACACATGATGGAGGCC 4385363 29 100.0 33 ............................. CAGTGAAAGAGCCGATGGTTGTTTCATTCTCTG 4385301 29 100.0 32 ............................. CACCGCTGCCCCCTCATGATTTACATGATCGT 4385240 29 100.0 32 ............................. TGCATGTAGCAGCCATTTACACGCTGAACTGT 4385179 29 100.0 32 ............................. CGGGCTTCCCTTCTCCTGTTCAGCCTTCTCCC 4385118 29 100.0 32 ............................. AGTTTGTCGGATACACATTATATTACGCAGTA 4385057 29 100.0 32 ............................. GCAGTAGCGATACATTCAGGTAAATCAAGCAA 4384996 29 100.0 32 ............................. GACAAAGTAGCCAAAACCGTGCCAGTGAATAC 4384935 29 100.0 32 ............................. AAGAAGTAAAAGATAAAACCCCTATCTCTAGC 4384874 29 100.0 32 ............................. AAGTTCAGAATGGACGTCTCTGGGTGGCTGAT 4384813 29 96.6 32 .............T............... GGGAGAACATTGCCACCGGGTATTCCGCCGGA 4384752 29 93.1 0 .............T.............T. | ========== ====== ====== ====== ============================= ================================= ================== 25 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGATTGAGGATGTCTTGTCTGCGGGTGGCATTACGCCGCCGCTACCGCCGGACGATGCACAGCCGCCTGCAATTCCAGAACCGAAACCGTTTGGTGATAGCGGCCACCGGGGGCAGGGTTAAATGAGCATGCTGGTGGTTGTGACGGAAAATGTCCCGCCGCGTTTGCGCGGCAGGCTGGCGGTGTGGCTATTGGAAGTCCGTGCGGGTGTGTATGTCGGTGATACCTCACAGCGGGTGAGAGAAATGGTCTGGCAACAGATTATCGAACTGGCAGAACAGGGCAACGTGGTGATGGCGTGGTCGACGAATACGGAATCCGGTTTTGAGTTCCAAACCTGGGGCGAAAACCGCCGAATGCCGGTAGATCTGGATGGTTTACGGTTAGTCTCTTTTTCACCTATTGAAAATCAATAAGTTAGCGATCTTTAACAACATGGAAAAATCGGTAGAATTTTTTATGCCGAAAAAAGTGTTATAAAACAACTCTCTACTTTTAGA # Right flank : GGCTTATACCCCTTGTTTCATGTTGGTCTAAATATCCCCTGCACGGTTCAAATCCAGCCTCTGGCTGGCGCGATGGGGGATTGCGTGTCAGTATTAAAGCACGCCATTTTTGCACTCACCGTAATGGTGACGCGCTATGCCAATGATTTTGTCTTCCATACGTTACCGTAAGGAGGTGATATGAAAGTTGAAGCCGCAGAGTCGTCCGTTTTTGCCAGCCAGCAGGTGATGGCGAAGCGTTCGACAGAGCATGCAGAGAAAGCGGCGCTGTCCGAACAGCTTCAGTCTTATCAGGTGGGCAGCGGTGCCGTTCCTGCTGGTCAGACGACGCGGTATGATTTCACCCGCATTAGTCCTGCCGAACTGTATGACACGGTTGAAGGCCTTGTCAGCAGTGGTCGGTTGGGACGTGAAGAAGGGTCCGCGCTGCTGGGTTTTGTCTCGTCGCCGAGAGCCGAAGGAGGAAGCATTCCACCTTCCAATGTGTTCCAGCCGATTAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [3-4] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //