Array 1 20663-21401 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBNO01000008.1 Streptomyces lydicamycinicus strain TP-A0598, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================== ================== 20663 29 100.0 32 ............................. GCCACGCGGTAGGCCGCCGCGGTCTGCGGGTT 20724 29 100.0 32 ............................. GCGAAACCGTCATCGTCACCGCCGCCGAACTC 20785 29 100.0 36 ............................. GTGTCTCGCGCACCGTGTCGCGGGGCGCCCGGGTCC 20850 29 82.8 32 ..G..........GA.........GG... ACCCGATCGCAGGACGGCGATCACCGACTGGT 20911 29 79.3 32 ..G..........GA...A.....GG... GCAGACATCCTCCGGGCAGTCACCGAGCACGA 20972 29 93.1 32 ..G..........G............... TCACGTGACGTTGCAGCCGCCCCAGTTCCGGC 21033 29 96.6 33 ..G.......................... GCCGGGGCGTCACCATCGCCCCCCTCCGAAGTC 21095 29 100.0 32 ............................. GCCATCCGCCCCCACGCCGCCGAGCTTTTCAA 21156 29 89.7 66 ........................CG.G. TCACGTGGGTCGGTCAGTGCCTGCGAGAGGCCGTGCGACCCCGAAGGCCGGCCCCGGCCCTCCCCG 21251 29 75.9 32 ..G.......TA.GA.........GG... TTCACCGAGTGGATCGGGCTGTACGCCCGCGA 21312 29 89.7 30 ..G.........T...........G.... GGGCCAGGACGCGTGGGCGCGGGCGTATGT G,G [21335,21340] 21373 29 82.8 0 ..G..............T......GG.T. | ========== ====== ====== ====== ============================= ================================================================== ================== 12 29 90.8 35 GTCCTCTCCGCGCAGGCGGAGGTGAACCG # Left flank : CGCCCTGGTGGGACATGCCCGATAGGGGAGGGCGGGTGAGTGAGATACCCCAGCCCCCCGTTTTGACGATGACGGCCGTCAGCACCATCGAGGTCACCGACCAGCACGACGAGGACAGCCCAGACTCGTGGGCGGTGATCGAGACCGCCGAGCAGGGGCAGCTGCTGGCCCTTCCCGGTCAGATGGCCGACGCTGACCGAGGGCACCTCGCTGCCGTCCGGACAGCCCGGCCCCGGACGCCTGGCGCTCACCGACGACGAGATCGCCACCTACCGCGCCCGCGATGCCAACCTGTCTGCCGCCAGCCGGTGACCAACGGTCAGGCAGCGCAGGTCACCAACTGGTGGCAGGTCCGCCGCCAGCAGGTCGTCCCGGCTGGTGACGCATACCTTCGCCAGCTGGCCGGAACGGGTCAGCTACGAAAGCAACACCGGGATCTGTGCGTTCTGCTGGAATAGTCCTGAACCAGGTGAGCGTGCCGAGCGAGCCGTGTGCCAGGC # Right flank : GATTCATGGCGTGGCCGTCAAGTTGGAGTTGAGGGGCTCTCCACGCAAGGGGCAGATGGACGACGCCGATTGCTTCGAAGCAAAGCAACATAGCGCGGGATCGCCGGTTAGCCAAACCGGCGGTCTCGCGGATCATTAGTAGTCCACCGCCAGTACTTGACCACCCGTCGAAGGGAACCGCCGAGACGGCCATCAATGCAACTTGCTCCACGCCCTTCAGCGCTCTATACAGCCGCGTACACCGTAAGGAACAGGTAACTTGCACCTCCCGATCCCATGAGGCACATATCTGCACCCCAGGTCGATCGCGCCGAAAAAACCAGAGCGCCACATTTCCCTGGGGCAACCCGGAAAAGAGGTCGACCCGCATTGGGTTAGCCCACTCATCGACGTCGACCTCAGCGCACAACGAGAGCCGCACTCTTATGGCAGTTTTAAACCGTATTTGCTGCGCGTAAGCAATACCATTTTTTACACCGGAGAATCTGAAGTGCACGAAC # Questionable array : NO Score: 5.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.54, 5:0, 6:0.25, 7:-0.17, 8:1, 9:0.54, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCTCCGCGCAGGCGGAGGTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCTCTCCGCGCAGGCGGAGGTGGTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //