Array 1 658708-664827 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG770319.1 Parascardovia denticolens F0305 supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 658708 33 100.0 35 ................................. AAATCATAAACCGGCTCACATACAACAAGGTCAAA 658776 33 100.0 35 ................................. TTGAAGACATTGCGATGAACATTCCCCCCGTCCCT 658844 33 100.0 33 ................................. ATCGACGAAATACTCAGGTTTGTACTCATCCTG 658910 33 100.0 34 ................................. AACTGATTGGATTACCAGTCCTATCATTGAAGTG 658977 33 100.0 33 ................................. ATGATTATTCACCTTCAATCGGTTTTATCAGCG 659043 33 100.0 34 ................................. TCGTAGAATGCGAAAAGCTGCATGACAATGTTAT 659110 33 100.0 34 ................................. TTGTGTTATCGTATATGATTGAGCTGGGGCAGCC 659177 33 100.0 34 ................................. ATGACCGGATAGGAGGAAATGAAACGCCTTTGAA 659244 33 100.0 34 ................................. AACAACCCGTATTTTTATAAGATAGGTTTGAAGA 659311 33 100.0 35 ................................. CTCCTGATTCTCATCGTCCTTCACGTTGTTTTCAT 659379 33 100.0 34 ................................. ACGACCCGGTGCGGGGCTTTTATCCCGCCCGGCG 659446 33 100.0 33 ................................. AACTCAAATACATTATCCATGCCGAGGAACTCA 659512 33 100.0 34 ................................. CCACACATTGCCGGGCCATTGGATCGCATAACCT 659579 33 100.0 35 ................................. AGCACGGCGGTCTGCTTGCCGATGGCCTCCTGCAA 659647 33 100.0 32 ................................. TCAACCCGGTAAACCTTCCCCACCGTGGACGG 659712 33 100.0 34 ................................. AGCACGGGCGACGGGTTCGGCTTCGCCGGAAGCG 659779 33 100.0 34 ................................. CCGTGCTATGGGACCAACTTGGACTGCTACTGCG 659846 33 100.0 34 ................................. TGCGACTTTGTCGACGTCGCCGACTGGCTTGACG 659913 33 100.0 33 ................................. TTCTGAGCGTGTCTCTTTCCGGGGTCGGCCCAG 659979 33 100.0 35 ................................. CGCGACTTTGTCGACGTCGCCGACTGGCTTGACGG 660047 33 100.0 33 ................................. ACCCCGGTAGAAGCACGAACCATTTTTGGAACT 660113 33 100.0 34 ................................. CAAGTCTCCAACCTTGTTTTATCAGACACGGTAA 660180 33 100.0 34 ................................. ACCACCAGCCAGCAGACGCCCATCCGGCAGGCCC 660247 33 100.0 34 ................................. TTTATCACCATCCTTACCAAGCTGATACTGATGC 660314 33 100.0 33 ................................. GAGCTGCTGGATGAGTGGCCGGAATCCACGATG 660380 33 100.0 34 ................................. CGTCTGTTGACCGGCATGAGACAAGGGGAGATCC 660447 33 100.0 35 ................................. GCCGAGACTTGGTGACCGGCCCCTGGTCGGTCTGG 660515 33 100.0 34 ................................. CACACGACATTATCCAAAAAATCTGTCAAAGGAC 660582 33 100.0 34 ................................. CGTCTCGCTACGCATGGGGCCATATGCGAGAAAA 660649 33 100.0 33 ................................. GTCCTGTCAAGAACGAGACTGTCCTGATCCAAG 660715 33 100.0 33 ................................. AACGGCGAGTAACGGGCAACCCGCATGACCATG 660781 33 100.0 34 ................................. GCCGAGACTTGGTGACCGGCCCCGCCAAACCCCA 660848 33 100.0 33 ................................. ACGTCATCCCATCGGTCGAGATCCCACACATCG 660914 33 100.0 34 ................................. CTGTAAACGCATCTTAACCTCCTTGATACCTCAA 660981 33 100.0 34 ................................. GGGACAAGGATGACGCCCAGGAGCGTGCTCAGGT 661048 33 100.0 34 ................................. AGACCGTTGATGTCGATTTTTTCCGGCTCCACCT 661115 33 100.0 34 ................................. TGTATGTTTGGCCCCTATGCATACTTTTGATGTT 661182 33 100.0 34 ................................. AGAACAAATATACCGCATATTTATTCCGCATCCA 661249 33 100.0 34 ................................. ATCCCCGGCATCGCATACTTTTTAAAACTGTGCA 661316 33 100.0 34 ................................. TCTCCCGCTCTCAAGGCAAACAGAGTGGAACGGT 661383 33 100.0 35 ................................. AAAGTCCGACCTACATAAAAGACAAACTGCCACGG 661451 33 100.0 33 ................................. TGAGGTGTAGGTCATAAAAATCCACCGATTGAG 661517 33 100.0 35 ................................. GACGGAAGAGAAAGGGGAGCGGCTCATCACGGACG 661585 33 100.0 34 ................................. AGCTCCCTATTATACACGAGGGGCAGGCTTTTCG 661652 33 100.0 34 ................................. CAATATCCTTCTTTTCCGGCCCTCTTGAGCAGGG 661719 33 100.0 34 ................................. ACATCCCTCAATGGATTGCTCCGGATAGCCGGTG 661786 33 100.0 34 ................................. AGCGTGAATATTGATACTGTCCTCGTTGTTATCA 661853 33 100.0 33 ................................. CCCACTCGCCGGGCTCTCTATCGCAACTTTTTA 661919 33 100.0 34 ................................. CCCGACGACGAGGCGACCGGGCCGACGCGGCGAA 661986 33 100.0 33 ................................. GACCATTACGGACCATAGTCGCCAGGCTGATGG 662052 33 100.0 34 ................................. GGTAAAAACTAACCAGAAAGGACACCTACCATGG 662119 33 100.0 35 ................................. CTTGCTTGGCCAACCAGGCCTCCAGGTCGGCGATG 662187 33 100.0 34 ................................. GTCGAGGTCCCATGCTTTGTCGCCTATCATACGT 662254 33 100.0 34 ................................. TGCCATCCTCCTTAGTAGCTTATCTGATCATATC 662321 33 100.0 34 ................................. ATGACACCCACCGGCCGCATCCTCGTCATCAACA 662388 33 100.0 33 ................................. GGTACATGCTTAATAATCTAAGTTACATTTGCG 662454 33 100.0 34 ................................. AGAATAAATATACCGCATATTTATTCCGCATCCA 662521 33 100.0 33 ................................. TGGCTGACGGCACGCCCGTTCTCTGCCATGATG 662587 33 100.0 33 ................................. AACGGTTCGTCCTGCATTTCACGGAAACGGAGT 662653 33 100.0 33 ................................. TATGGTAATAAGGATGATTGGAAGACGCTCTTC 662719 33 100.0 32 ................................. ACACCCCTTAATGGATTGCTCCGGATAGCCGG 662784 33 100.0 34 ................................. TGGACCGGGGAGGGGAGCAAGCTCACCTTGATTG 662851 33 100.0 33 ................................. CCTTCGCTGGTGGAGTCGTCGACATCCGTCTTG 662917 33 100.0 33 ................................. CGCGAAAAGGTCATCGCTGACTTGGAATCCTGG 662983 33 100.0 34 ................................. AGAAATGTAACATATGCTACACAGAATGGCGTGA 663050 33 100.0 35 ................................. ACCCGGCGCACCTTCCTGCCGCAGGACGGGCAGTA 663118 33 100.0 33 ................................. AATCCCCGGAGGCGGGTCTCGTCAATCCTCCGC 663184 33 100.0 34 ................................. GTCTCGCGTAGTCGACGCTGTGGTTGCTTTTGAG 663251 33 100.0 33 ................................. TTGACCAGAAGCCTGGTCTTGGCGTCGACGTTA 663317 33 100.0 33 ................................. GCCCACTGGTCGCAGGTCAGCTCCAGCCTGTCT 663383 33 100.0 35 ................................. ATCCAAGCCAAACTGATAAATCGGTTATCCGGAGT 663451 33 100.0 36 ................................. TTGAGAAGCAACGCCACGGCGTACGGCAATGCGCTG 663520 33 100.0 35 ................................. GCCAACCACCTCGGCGTCAACAAGAACAGCGTGTG 663588 33 100.0 33 ................................. TCCGCTGTCCCCGCCGCCGGGTTGGAGTCGGAG 663654 33 100.0 35 ................................. AGATTGAAGGTCGCCGTATTCCCATACGGGCGCAC 663722 33 100.0 34 ................................. GAGGTGGCTGTCTGCGAGGCCGAGGTGGGTGACG 663789 33 100.0 35 ................................. GACGGGAACAGCCTCAACAGCGTGAACCCCGACGG 663857 33 100.0 35 ................................. CGATACTCGCAGTAGCACCGGTGCTCCCTGTCGAT 663925 33 100.0 34 ................................. TGATTGATTGATAGTTCTATTATAACACTATCCC 663992 33 100.0 34 ................................. CTTGACCGGCCGTCACGCGGAGGTGAAGTTCCCT 664059 33 100.0 35 ................................. CTCGACATCCTCACCTGGATGAAAGCACCCCGCCA 664127 33 100.0 34 ................................. CCTTTGGGAAGGAACATCAAGGATGGGAGCCTGA 664194 33 100.0 33 ................................. AAGTCCTGGTCGTTTTTACTTTTCACGTCGCCG 664260 33 100.0 34 ................................. TGTGTTCACAGCACCGGAAACGTCGGCCCACCCG 664327 33 100.0 34 ................................. CTCATCGACTACTGCCGGAACCTGAAGCCCCTCT 664394 33 100.0 34 ................................. ACCCACACGCTCCACACGTACGTGTCGGCCGCCA 664461 33 100.0 34 ................................. AACCCCGCCACCAGACGGTTCAGCCGGCCCACCG 664528 33 100.0 34 ................................. GGATTCCTGATATGGTTTTTCGCCGTCAGATAGG 664595 33 100.0 34 ................................. ACTCCAACTTTTGAAAGGAAGTCGAAGATGTCTG 664662 33 100.0 34 ................................. AACGCCGACAAGCGCACCCCCATCCTCGCTACGG 664729 33 100.0 33 ................................. ACCTTGCCGGGGTCGGTGTAATGCTCCTGGAGG 664795 33 93.9 0 .............................G..C | ========== ====== ====== ====== ================================= ==================================== ================== 92 33 99.9 34 GTCGCTCCCCGCAAGGGGAGCGTGGATTGAAAT # Left flank : TACGATGGAGGTTGCAGGGCAAAGGCGATTACGTAGGGTCGCGAAGGTGTGCTCAAAATTTGGTCAAAGAGTACAAAACAGCGTTTTCGAATGTGAAGTGACTCCTGCGGATTATCTTTTGCTTAAACACGATTTGTTCGAAATCATGGATGAGGAAGTGGATAGTTTAAGGTTTTATAATCTTGGGAGTAAATACTCGAATAAAATAGAATACCGAGGTGTTCAACGGCACATACCGGTGGATGGCATTATGATGATCTAAGGTTTCGGGACCAGATGGGAAGCGAAACATTACGGTTGTGCGGAGGTGAAGCTGTCATAGAAATCCTGGGATCTTCGCACCAAGTTTTAATATGAGCTAAATGGTTTTTAGTAATTGCGCCTTATTTGTCTTAGACATTTTATGACAAAAGCGTCAATTCTCTGCCTCTTATAGGTAGAATAAAGGAATAGAGATGGATTCGTGTCTTGATTTCTGAGATTATTTGTCCATTTCTGCG # Right flank : CCTGATGCTGATGACTATGTGGCTAGTGTCATGATGGATTTTTTCACAATGGATAGATTAAAAATGTCAGTCCTCCAGTGATTGATCGTTTCTGCTGGGTACGATTCTGATTCGCATAAATCATGTCAAGGGGTCTTATCCTAATTCAGCAGATAGATTGGAGCTTATCTGAAGGCTTACTGTTGGCTTACGAGCAGTTTCGGTGAATCTGCATAGAAACCAGACGTTCTCTTTTATACTCTTCTGCATTTTTTTACAGTGCTGGTAAGAGATGCGAGACTTGCACAACAGTTATGGTCGGGAAAGCTAGTCGGAGATGGTGCCGAGTCATGTCGTACGCTGAGAAATTCAGACAAAGATTAGCAGCTAGTAAGATTCAAAATAGGCACAGAGAAAATGGCATGGTGAACGAAATAATCAGCGTGTCAATCATCCAGTCCGTAGGACTCACTGGTGATATCTCACATTAACAGAAACGCTATCGACTTGTTGAATCAGCA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGCAAGGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCTCCGCAAGGAGGGCGTGGATTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.30,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.15,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //