Array 1 158228-160173 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPLU010000001.1 Streptococcus pasteurianus strain 1001285H_161024_G5 NODE_1_length_311514_cov_55.4262, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 158228 36 100.0 30 .................................... GAAAGTAGACGCCAGAGATTACCAAGAATA 158294 36 100.0 30 .................................... ATTCCTCTGGTGTATCGGCCTTAAGCATGA 158360 36 100.0 30 .................................... TGTTTTTTAGTGCAAAATAAAAAGCCTTGT 158426 36 100.0 30 .................................... TGGAATAGAGGTGTTAACACACTTCTTCTC 158492 36 100.0 30 .................................... TTTTTTATCAAAATCAACGAAGATGCAAAG 158558 36 100.0 31 .................................... CTGACCCATTTCAAGCGATTATTGATAGCTA 158625 36 100.0 29 .................................... CAATACACCAGAAACTGTTACAAGTGCTT 158690 36 100.0 30 .................................... AGTAAGCTTACCGTTTGAAATTGCAGTCAA 158756 36 100.0 30 .................................... TCTCTGGTAATAGTGACGACCTTGAATCAG 158822 36 100.0 30 .................................... CACCAACAGGCTATGTTATTGACGGTTTCC 158888 36 100.0 30 .................................... TAGCTGTATACACTTTAGATTGATTGACTG 158954 36 100.0 30 .................................... TCAAGTAACGAAACATACGCTGTGTGCATT 159020 36 100.0 30 .................................... TCCTTTTCTATTTTTATGCGCTAAATTCTT 159086 36 100.0 29 .................................... ATTATCAATCAAAGAAAGGTAAATGAAAT 159151 36 100.0 30 .................................... GAGCAAGTGGAAAGGCGACCAAGGATTGCC 159217 36 100.0 29 .................................... ATGGCGAGCACAAGCATACCCAGACCGTA 159282 36 100.0 30 .................................... CTTTACCAAATTCACCGTCGCCCTCTGTAA 159348 36 100.0 29 .................................... TAATTGGAAACTAGTTGCATATGCGCGTG 159413 36 100.0 30 .................................... CAACGTCAAAACCTCTGTGCGCATAACCTA 159479 36 100.0 30 .................................... ATGCTGACACTACAGCACATTCTAAATCAC 159545 36 100.0 30 .................................... GATTGAAACGACCATTGACAATTCAGCTAA 159611 36 100.0 30 .................................... CTATTTTTATGCTCAATATCAATGCCAATC 159677 36 100.0 30 .................................... ATTACCAATTTTACAATGTTCGTTTAGATT 159743 36 100.0 29 .................................... CCGTTAGTGTATACTTGTACGGTTCGCGT 159808 36 100.0 30 .................................... GGACTGTGAGTATAACTTTCTCGGTGCTGA 159874 36 100.0 30 .................................... AAATGCGACGAATGAGGTTACTGATAGCCA 159940 36 100.0 30 .................................... AATATAATTTGTAAAGCGAACAAATAAACG 160006 36 100.0 30 .................................... TAATAGAAAGGAGGTAGAATAATGAAACTA 160072 36 100.0 30 .................................... CAAAAATATTTGTAGAAAACTATTGACATT 160138 36 83.3 0 ............................TT.TGT.T | ========== ====== ====== ====== ==================================== =============================== ================== 30 36 99.4 30 GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Left flank : GGATGACTATCTTGATTATTCTTCTTTCATAACTATTTGTAAGACTATTACGCAAATGACTGAGAAATTTCCTAATTTTTATTGCACAATTTTCCCGTCAAATGAAAGTTATTTATACGTTACTAAAGAAACAATTGAACATGTTACCATTGTTTCAGACTTTATTGAATCATTGTTTGACTTGGATTTTATGTATGAAAGATTTATTGGTAGATACCCATCAAATAATATTCCAAGTAAAAGTGAGTTTTTGATATTACTTCAGAAAAATGCAAGTTATCTGTTTAGTGATCAGATTTCATATATTAGTTTAGGAATTCCAGATATGGTAGCCATCAAGATTTTAAATAGTTTATACCATTATGATAAGTCTGTTGTATATCCAATACCTAAGATAGAACCGATAGAAATAAGCTTTTTAAAGGACAGAGATTGACTTTTTTGCCTAATCAAACTATAATCGATTTGTAGGATACAAAAACTAAAAATGACGATTTGAG # Right flank : TTTATTATTTAAAATCGGTTGAAAGGGATTTTATGACTTCAAAAATTTTCTTTGGTGAGTGGATGAGGATGAAAAAATTGATAGCGCTTTTATCGATTTTACAGGAATCTCTGGTGTTATTGTGAATATGAAAGTACTCCTGATAGCATCAAATTAATTATTTTCACTGTTCAATAAGGTAATGGAGCAGGTTTATACTTATCAATTTCGCCCCATTTTTGAATAGTAAATTTGCTGACAATTATGAGTTAAACGGGTATAACATTAAACAATTGATTCTTGATGCGTATGCCAAAAAAGATATTAAGCACTGAGGGCGCTCAGGATGCTTTTAGACGAAATTATTTTATAATATTTAACCTTTTTACCATCTTATGATGCTTTTTTTCTTGAAATGACTTCTAAAACTTTTATAGCAACGTTTCTGTTTATCTGTTATAATAGAAATAATGATTAATTGTATAGGATTGTAAGATGGATATTCAAGAATTAAAAAAACG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //