Array 1 8300-9469 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_RCKR01000008.1 Moraxella catarrhalis strain 105/305/2 NODE_8_length_70854_cov_24.413746, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
      8300	    28	 100.0	    32	............................	CCACCAATAGGCAGGGTTTTCTTGTTATTTAT 	
      8360	    28	 100.0	    32	............................	ACTCATGAGCCAAAACCCTGCTCCACCAAAGT 	
      8420	    28	 100.0	    32	............................	GTTTCGGTTGTCATCAAGATAACCGACCAGCA 	
      8480	    28	 100.0	    32	............................	AAGGTGAGATAATGATAAGAGTTGATAAGTGC 	
      8540	    28	 100.0	    32	............................	TTTGACAATCATCGTATGTGGCTCAGGGGCAA 	
      8600	    28	 100.0	    33	............................	ATTTTGATTTTTGAAGCATTGAGCGAATCTGAG	
      8661	    28	 100.0	    32	............................	ACGCTCTAGCTTGATCTTATCAATGCGACTTT 	
      8721	    28	 100.0	    32	............................	GCACACACCTGACAGCCAACACTCAATCAATC 	
      8781	    28	 100.0	    32	............................	TAAAAGCTCATAGTTAAGCTGAGTTGCGTGAA 	
      8841	    28	 100.0	    32	............................	TGTTGAAAAAATCTTTAGTACGCAGGATAGAT 	
      8901	    28	 100.0	    32	............................	AACTTACTGAGCTTTCGACTGTTCTGATGCGT 	
      8961	    28	 100.0	    33	............................	ATGGCAGTATTATGAAACGGGCAAACTTATCAT	
      9022	    28	 100.0	    32	............................	GCACGAAATACACGCATTACCATGTTCGCTTG 	
      9082	    28	  96.4	    32	...........T................	AACTAGGAGAAATCTCATGGCAAAAGTTGTAG 	
      9142	    28	 100.0	    32	............................	TTGATGTACTAAAGTCGTGTTAATAACATAAT 	
      9202	    28	 100.0	    32	............................	TTACCTGATGATACCATTTCCAATTTAACTTC 	
      9262	    28	 100.0	    32	............................	CTGCCACCTCACACAGTGGCAGAGTTTACCCA 	
      9322	    28	 100.0	    32	............................	AAGCATTAATAAAATTCCAAGCATTGAAAGTG 	
      9382	    28	 100.0	    32	............................	ATTGACTGAATTTACCGCAGTTTCAATCGTTG 	
      9442	    28	 100.0	     0	............................	|                                	
==========	======	======	======	============================	=================================	==================
        20	    28	  99.8	    32	CTTCACGACCGCACAGGTCGCTTAGAAA	                                 	       

# Left flank :   TGCCTGTGCCAAGTAAAATGACCGTCGTGTTGGCGATCGGAATATTATAATAGTGGTTTTGGTATTTCGTTTCGGTCAGGTATAAGATACGCCCATCTTTTTGCATGACTCGGCAATGCTCAAGATAAAATAAATTCGCCCGTTTGGAGTGTAAAATTGCTTTCAAATCGGTCGGTTTGAGCGTATTCATAATAATACAAATCCATGTTTAATGATTCAATTTTATCCTAACAATTTTCAACATCATTTAATATGATTTTATTGGATTATAAACTAAAAATAAATTTATACCAATCATTTTTTAATTGTATTTAGCGATTAAAATGTTTTAAGATAACCCAACCAGAAGATGGAAAAATAACTGATTGACCCTTTATTTTTTTACTATTTAAAAACTTGAATATTTTCAATAAGTTATAACATGAAGATTTTTGATTGGGTTTTTGACAAATTTTATCATAATGACTTGTTATTTCTTATTATTTTGGTTTATACTAACT
# Right flank :  ATTTTGTTCTATGGCTACGCTGATTATTTAAAATTTTTGTGCCAATCCCTTGAAAATTTTATCCTTAACCATTATGAAGATGGGGAATTTATATTAACTTTTTTGGGGCAATTTATGACCGAGCAAACCACCGAACAAACCACTATGGAAGAGATTATGGCTGAGACGACAACCGAGCAAGTCGAAGCACTTCATAGCCAAATCCAAGCGCTAGAAAATGAAGTCAAAGAAGCCAAAGAGACTGCCGCGCGTGCCAATGCCGAAAGCTATAATGCCCAACGCCGTATGGAACAAGAAACCGATAAAGCCAAAAAATTTGCACTACAAAAGTTTGCCAAAGAGCTTTTGGAGGTGGTTGACAACCTAGAGCGTGCCATTAAAGATGCTGAAGAGACAGGTGCAGATGACGCATCACTTAAAGGCATTCGCCTAACACATAAAGTACTGCTTAGCATCCTTGAGAAAAATGGCGTCGTGGCCGTGGGTAATGTCGGTGATAC

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTTCACGACCGCACAGGTCGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-7.40,-7.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [81.7-71.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.92,0   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
//