Array 1 229020-230007 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABUYL010000002.1 Proteus sp. FME41 NODE_2_length_298191_cov_253.032, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 229020 28 100.0 32 ............................ AACGAGGGCAAGGGTTCCTGTTTTGTCGGGTA 229080 28 100.0 32 ............................ CTCGAACAAGCAATCCTTTTGAGTCCTCTTCC 229140 28 100.0 32 ............................ TAACAGATGCATCATAAATTCGACCTGCATAA 229200 28 100.0 32 ............................ TTGATCACGGTGATAACGAACTCGACGAGTTA 229260 28 100.0 32 ............................ TGACACAAACAAGCCTTCAAGTTGCCATTAGT 229320 28 100.0 32 ............................ ACATCGGAAAATGGCAGAGGTTGAACTTGCTG 229380 28 100.0 32 ............................ CGTGTTGAAGCGCCGACAGAAAACACGACTGC 229440 28 100.0 32 ............................ TTTTGATAACCAATAACTTTTCACGTCTTTTA 229500 28 100.0 32 ............................ CATAGATGAAAGCACTTCGTAGGTATAACCTT 229560 28 100.0 32 ............................ GGTGGAATAAATCCACCCAGAGGGGTATCGGG 229620 28 100.0 32 ............................ TATCAGACAAAATCGAGCAACTCGAAAGGCAA 229680 28 100.0 32 ............................ TGCTGTTAATTATGAACAATCATGCAGTGCCA 229740 28 100.0 32 ............................ TCCCTAGGGGAGTTGTAATTAGAAAACATAGT 229800 28 100.0 32 ............................ AGTTAGATAAAAAAACGCCACATTTACTATCA 229860 28 100.0 32 ............................ CGACGGAAAATTAAAATCAGTTAATTAGTTTC 229920 28 100.0 32 ............................ TCGCTATGGAATGGGGAAACGTCTCAATATCA 229980 27 75.0 0 .........T.....ACT.A.-.G.... | T [230006] ========== ====== ====== ====== ============================ ================================ ================== 17 28 98.5 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : AAACCAATACCAAGTGATGTGAGAGAATAGACCTGTTTTATACGCCATAATCCCAAATTGCACCAGCGCTGTTTAACGTAATTAGAAGGTCCTACTTAGCATAAAATCATGGTGTATTATACGCACGGAACTTTGAGTATCAATTGAGCAAAATTCAGCTGAAAGTAAGTGGCCCTGTATTAATGTGCAAAGTTTATCAACATCTTCTGAATCTCAGCTATGTCATAAATTTATGCTTTTTATTCAATACGATAAGTCGAGTTTGCAATTGGATAATATCAACACATGTTCTTACTATGAATTGAGCCAGAAAGAAAAAGGAAAGCAGGTTTTTGTACCTTGGTTTTAACCTAAGTATTCAAAGGTTATACCCTTTATTTTTTGCTCTTTTAAAATCGTAATAAAAACAACAAGCTATATGCAGGCACTTTTAATAAGGTAAAAGTAGTTAAACCTTATTAACACTTTGCTGTAGCTTGTTTTTTTGTGATAATGCTATT # Right flank : ATCTACTATCCAGCTTGCTGTGACGATCTCTTTTACGGATAAAGGTTTAGTTTATCTTGCTATTTTTGATGTTCCATTATTTTAGGCACCTCAAAAACTATAAAGGTTAACGAGGTGCCTAATAAAGCGCCTAAAAGATTTTAAATTAATTAGTTGGCTTCAGAATAGCAGGACAATTTGAGGGCATAAAAAAGCCCGCACGACTTACGTCTTGCGGACTCTTAGAACTTCATCAAATGACTCTGGTAATCACTGATGGAGAATTTTGGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAATTTCTACATCCTCGGTACTACATGCTTAGTCTATCTTTAATTTCACTTACCCACTGCGGATAGACGCGCTATGAATAAGCTAGCTTGATTAAGTTTAACGCTTTGACCCCAAGCTAGGTCTCCACGCGATCTCTTTTGGGTTTGACCTCTCTTGATCCCCGTCTTAAGAGCGGAAGCTAGGGAGAGAGGGCTCTAAGC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //