Array 1 1762-353 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFIQR010000188.1 Anaerobutyricum hallii strain HTF-385 scaffold_221, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1761 30 100.0 35 .............................. CCCATTGACCTCCAGTCAGATATTCGCTTATCTAC 1696 30 100.0 37 .............................. AACTGTTTATTCTCGTTGTACTGTCGGAAGCAATATT 1629 30 100.0 34 .............................. GATAAACCAATTTGCTTATTATAAGCCCACATGC 1565 30 100.0 37 .............................. CTTATCTGCGCAATCCGGGGCGAAGCGATTGCTGTTC 1498 30 100.0 34 .............................. GCAGTAGAGTTTGCTTCTAGTCTGGTAACTCCAT 1434 30 100.0 36 .............................. TTTGTTTTAAATAAGGGCAAACACACATGGAAAGAG 1368 30 100.0 34 .............................. TTCTGTCAGATACCGCTACCTCAACCCCGATGGC 1304 30 100.0 34 .............................. TTCTTTATCAAAAGGATACCAGATTTTATATTGC 1240 30 100.0 35 .............................. TGAAGAATTCAATCGGTTTTCCTGTCGCTGCAGAT 1175 30 100.0 38 .............................. AAGTACAAGATCGGACAGGAGGAAAGAGTATCCATAAC 1107 30 100.0 37 .............................. AGCAAACGCAAAAGCTTGGCAGATATCTTAGGATAGG 1040 30 100.0 36 .............................. AATTTATGATACAATCCTTTTCTCATTTCTGAGGAT 974 30 100.0 35 .............................. GTATTTTTACATAGATAACTTATCCTGGTACAAGG 909 30 100.0 36 .............................. ATTTTTCTCGATACCCACGCATTTTCCGCTATAATA 843 30 100.0 34 .............................. TTGGTTGAGACGATGATATTCCTATTATGTCAAC 779 30 100.0 38 .............................. AATGTGGATAAGGTTTGCTTTCATAGAGAAGGTAGCCG 711 30 100.0 36 .............................. GGGATTAACTTCATATGTCCCACGGTCTTCAGTCTT 645 30 100.0 36 .............................. GATGATGTATTTGTTTTTTTTGTAAGCTGATTTAAT 579 30 100.0 35 .............................. AAAGAATATCTGCAAAAAATACGCTATATTGCAGA 514 30 100.0 36 .............................. ACGGCAGTACAGATTTCAATTTCCGGCCATTCCTTG 448 30 100.0 36 .............................. CCACTTACTACATCACTCACCGTTCCTTCTTTCTCA 382 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== ====================================== ================== 22 30 99.8 36 GAATTAATAGATACATTATGGAATGTAAAT # Left flank : ACAACATCAATAAAATTTGTAACAACTTT # Right flank : AGATAGAACATAATAGTAAAGAATAAATTATTAAAGATGTTTATAATCCTTTAGAAAACTAAGCGAGAATTCTCGGTAGTTTAATTACCGAGATAAAAGTGTTTGTTTTTGTATATAGCTGAATGCGTTTTTTGAAAACAAAAATATGTTCGAAAAAATATTGACTATATAGTAAAATAATGGTATATCTATATGTATAAAATAAAGTCAGATATATTTTATCCTCTTACAGCAAGAAGACTCCGACCTCTAAGGTGGGAGATGAATTGTGTCTGCTACCTGCTTGATAGAGCATCCTGATTATAGTATAGTATCTTTAGTCGGATAATAAAAAATTGAGATACAATAAATTG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATTAATAGATACATTATGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 192-1534 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFIQR010000303.1 Anaerobutyricum hallii strain HTF-385 scaffold_199, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 192 30 100.0 36 .............................. TTAAGGCAATGCCAGGACAGACCATTGGAATTATTG 258 30 100.0 35 .............................. GATATCGTTAATCATATCTGCTCCGGCAGCAATTC 323 30 100.0 35 .............................. TCTACCTGCAGCTCTCCGTCATTATCTGCAAAAGA 388 30 100.0 35 .............................. TGAAGGAATTAGGACTAAAATAGCATGGATTTAAC 453 30 100.0 35 .............................. TTGTATCTCTCTACATACTCCTTTTCGTTTATCTC 518 30 100.0 37 .............................. GCCAAAAAACTTGGACAGATTGCAGGAGGCGTATTTG 585 30 100.0 35 .............................. ATATAGCAATTCGAAGGGCAATGATGGAAGAAAAA 650 30 100.0 36 .............................. ATGTTCCAACCAACATCATGTACAAAAAAGAGGACG 716 30 100.0 36 .............................. GTTAACACTAAATAATTTGCTCATAATATAAAACTC 782 30 100.0 36 .............................. ATGACCCAGAAGGACGGTTTGCCTTATTGAGCATAG 848 30 100.0 36 .............................. TTTGATACTGCTGCTTATGGATAAACCATTGCCGTC 914 30 100.0 36 .............................. ACCGTTATGAGTGGAAGAAAATCAACAGAAGTTTCA 980 30 100.0 37 .............................. TTTCCTGTAATCATTCCCATCCAGCAGCTATAGGTAT 1047 30 100.0 34 .............................. CTAACTGTGCCGCAAATAACTGCTGATTCTGCTC 1111 30 100.0 36 .............................. TTCTGGCATATCCTCTTCGGCATCTTCCGGAATTTC 1177 30 100.0 36 .............................. TGAAATCACTCCTTTTTATTTATTTAAAACCCTTTA 1243 30 100.0 34 .............................. AGATTAAAAATTTAGGCAACGAATTAAATGATAA 1307 30 100.0 38 .............................. TGAACTTCCTCCGAACCCGGGAACCCAGTCGGGGACAT 1375 30 100.0 35 .............................. GTGACTATATCTTTTTTAAATCTAGCGAAATGTCC 1440 30 100.0 35 .............................. ATGTCTTGTAATTAATAAAGCGGCTGTACAAACCT 1505 30 86.7 0 ...........T....AT.........G.. | ========== ====== ====== ====== ============================== ====================================== ================== 21 30 99.4 36 GAATTAATAGAAACATTGTGGAATGTAAAT # Left flank : CATTTCAACCTCCGACAATTATGATACCTTAATTATATCAGATATATGATTTTACGACCACTTTTTCAGTGGCGTCCTATAGGTGGGGGAGGATGTCACACGATAGATTCTCGAATAGAACTTCTGCATAAACAAGATTGGTATAAATGTTGACTGTATTATTATATGGCCCTCCGGGTCTTGGAAAGACAG # Right flank : TTATTATCATAATTAATATTTAGCAGATGGGATATATCAAAAAGAAAATATGACAATGATTTTAAACGGGACATGAAATTGCTAACAGTGATATTTTAAGTGAGGTGCTGAAAGGTGATAGAGTATGAGAATTATGGAAAATTAGAGAGTCTTGCAGAATTAGAAAATGCCATAGAGATGGGATTAGATATTGAGTTTCTTCTATATGATACGAGGTATAATATTTCTTGGAGAGATAACAAACCATTTATATGCGAATGTCCAGAAGGAGTGGCTAAGTTTTTTGATACCTCAGAACTTTTGTTACAGAGGTATGAAGTGGGTGACAATCCTCTGAAATCTCTATGGGGAGATATGAAAATATTATCTATGTGATTAACATGTTTGGTAAATGGAAGGCGGACGTGTTAATTTTATACCTATTTTAAGGAGAAATTTTATAGAAATACTCTGGAATACATTTGCACAAACTCCTCGCATAGTTTAAAATAGGAAACAAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATTAATAGAAACATTGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 285-56 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFIQR010000256.1 Anaerobutyricum hallii strain HTF-385 scaffold_312, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 284 30 100.0 35 .............................. TAAAGTTGTTACAAATTTTATTGATGTTGTGGACA 219 30 100.0 36 .............................. CATGTCGATTGACAATTCCTCATCATCTGTACTAAC 153 30 96.7 38 .............................A CTTTCTTTTAGACTGCATCTGCAATATCAGAAGAAATT 85 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 4 30 99.2 37 ATTTACATTCCATAATGTATCTATTAATTC # Left flank : ATTCGTAGATAAGCGAATATCTGACTGGAGGTCAATGG # Right flank : CTCCAATTTTACTTGCACATACTTTCTATTGTATTTATTTACATTCCATAATGTAT # Questionable array : NO Score: 2.82 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACATTCCATAATGTATCTATTAATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 269-40 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFIQR010000373.1 Anaerobutyricum hallii strain HTF-385 scaffold_320, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 268 30 100.0 38 .............................. AATTGCTTCTGATATTGCAGATGCAGTCTAAAAGAAAG 200 30 100.0 36 .............................. GTTAGTACAGATGATGCGGAATTGTCAATCGACATG 134 30 100.0 35 .............................. TGTCTACAACATCAATAAAATTTGTAACAACTTTA 69 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 4 30 100.0 37 GAATTAATAGATACATTATGGAATGTAAAT # Left flank : AAATAAATACAATAGAAAGTATGTGCAAGTAAAATTGG # Right flank : TCCCATTGACCTCCAGTCAGATATTCGCTTATCTACGAAT # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATTAATAGATACATTATGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [36.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 1176-3373 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFIQR010000392.1 Anaerobutyricum hallii strain HTF-385 scaffold_110, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 1176 29 100.0 36 ............................. ATATGGCGATGCTCTGTAATTTAATTGGTGCAGTTA A [1179] 1242 29 100.0 35 ............................. AGCCTATGGCATCAATCTCCACATCAATTTTATGC A [1245] 1307 29 100.0 34 ............................. CTAAACTAATCATGTATTCGTTTTTTGTACATCA A [1310] 1371 29 100.0 37 ............................. TCAAAAAGCAAGTACTGTACAGTTTCGCGCTCCCGCA A [1374] 1438 29 100.0 36 ............................. CCTAAACGCCGCACAAGAAAATCCCGTGAAGAAGTA A [1441] 1504 29 100.0 35 ............................. AAAGGTGTTTACGTCTTTGATTTTTCAGACAATGG A [1507] 1569 29 100.0 35 ............................. TTTTTCATCATCGCTATACTCGTTTAATATAGTAT A [1572] 1634 29 100.0 35 ............................. TTGTAAGACCCTCAACAGCTTTTGCACTGTCATTA A [1637] 1699 29 100.0 37 ............................. CTTTAGGGAGTCATATCCCAAATGTGGGAATTAGAAA A [1702] 1766 29 100.0 36 ............................. TAACAGTTCTTCTGGTGGCACGAAAGTGTCAGATTT A [1769] 1832 29 100.0 36 ............................. AGGTTTATATGCCTCGGGAACAACCCGGCATCACTG A [1835] 1898 29 100.0 36 ............................. ACAAAGACATCAGAACTTGAAAACGATGCAAATTTT A [1901] 1964 29 100.0 36 ............................. CTCAACAGCGCTGTAATGTTATGATTTCCTGTATTT A [1967] 2030 29 100.0 36 ............................. TTTCTTTTTATCAAAATAATGTCACTTACAGAGAGG A [2033] 2096 29 96.6 35 .....................G....... CACTTTTAAATATGTAAAACAGTAGAGGGGGTTAT A [2099] 2161 29 100.0 34 ............................. TATATAGGCGGCGATTATTATAAAAAAATTAATA A [2164] 2225 29 100.0 37 ............................. ATGATTTAATTATGAGATATATTGGTACAGGAACAAC A [2228] 2292 29 100.0 36 ............................. CGGAAAACGTTTTAGAAAAAATTGACACGTCAACAG A [2295] 2358 29 100.0 37 ............................. ATTGTAAATGTCTTTTTATCTGTTTTAACTGTTCCAT A [2361] 2425 29 100.0 37 ............................. TTATTAAGCTGGTAACTTCTCGTACCGAAGCATTTAC A [2428] 2492 29 100.0 34 ............................. CAATTACCTTTTCTGAAAGAATCTGGTCCGCTGT A [2495] 2556 29 100.0 38 ............................. ATAAGAGACCGGGAAAAAGTACAGGATATAGCAGACTA A [2559] 2624 29 100.0 36 ............................. AAATGAAAGGATTTCTTTGGACGGATAGCAACAAGA A [2627] 2690 29 100.0 36 ............................. TAACATTAGAGGATACGTTCGGATCAGATTTCAATG A [2693] 2756 29 100.0 36 ............................. GTATAAGTATTATCGGTTGATTGAGGGCTAAGAGTG A [2759] 2822 29 100.0 35 ............................. ATTTTAGAGAAAGCAACAAGATACAACGTAAAGGG A [2825] 2887 29 100.0 35 ............................. GATAATGGTGGTGACGTGGAAATTATGCAGGCTAT A [2890] 2952 29 100.0 36 ............................. GCTCGATATTTTCAAGCTTATCAATTTTCTTATTTG A [2955] 3018 29 100.0 35 ............................. CTGTATTTGGTGCCGTCATCCTGCAGGGTACATCA A [3021] 3083 29 100.0 38 ............................. TTCTGTGAGTGTGATTTGTTTATATTCCATAGTTCCTA A [3086] 3151 29 89.7 36 T.........G.T................ TCCTTTTGCAAAGTAGGCAACATCGGCTGTTGAGAA 3216 29 86.2 35 T........GG......C........... CTAAATGAAATGTAGGTAGCGAGATGAATTGTATA 3280 29 89.7 35 ...T.....GG.................. TCAGTTCCAGCCGCTCCATGTCTTCATCCTGCGGA 3344 29 82.8 0 T.........G...........A....GA | A [3367] ========== ====== ====== ====== ============================= ====================================== ================== 34 29 98.4 36 ATTAAATAGAAACATATTGGAATGTAAAT # Left flank : GAAGGAAGATGCGCTGAAGAATTTGAAACAAGAGGATTAATTGCTCTCTAGATTTTAAAAAAACAGACGGAAATAAAAAATAGATATATAGTATCTGTTCCATATCACTGCACGAATAATGCTTACCCGCATTATTCGCTTGCTCCAAAGTCACAGATACTATATATCTATTTTTTTATTTCCTGTCTTTGATAAATTGGAGAGGTTATTCAAATTTTAGGTTACTACTTATACTTTTAAACGCCTGTCCTTGGCTACTTCTCTCCTTCTATGCTTAACAAGAAATCTATTACTCCGTTCCTACTATTTTTAAACTGTCGCCCTCCGATAATGTAAAAATGCCCGTACATCGACAGAATTCTACAAACATGAAAAATAGGTGATTTTGTTTCTCTTTCGTAGAATTAATGAAGGAGATATGGTAAAATATTTGTAAACTTTGGCTGGTCAACAGAAAGTGGGGAAATAAGGTAGAAAAGAAGCGGGAATTCGGGCGATGG # Right flank : AGCAAACAATTTAATATCAAATCATCATATTATCGCTTTAAATTCATAAAACAATTTACTTTATCACGAAATCAGCATAATTCGTCAGAAAAGCAACAAAAATAGGAAAATATGTGATAATATAATCGAAATGCTATTTATTTGTTTAAAGACTAACTTAGAAACAAAGTTTTTTATAAATAATGCGATAGCGTGAGAAGCAAAGAGGTAATGTGATAATTTGGAGGTGTTTTGATGATTCGTCAGACAGGTTTAGCACAGGCAATTGACATAGCAGAGAATCGTGCAAAGTACGATGAATGTGCAAAGAAATTACTGAGCTATAAGGCAATCATAGCGTGGATTTTAAAATCCTGTACAAAAGAATTTTCACAATACGGAGTGCAGTATATCTGTGATAACTGCTTAAAAGAAGAAGCCGAGGTATCAACCTATGCAGTACATCAGGATGAATTAGATAAGAATGACAAACTGGATGGAGACAAAAGAGTGGAAGGCAT # Questionable array : NO Score: 3.18 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAAATAGAAACATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [11-25] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 11898-10621 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFIQR010000249.1 Anaerobutyricum hallii strain HTF-385 scaffold_59, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 11897 30 100.0 37 .............................. GATGTTGTTGCGGCATCCCATCAGTCGTTGTCTCATC 11830 30 100.0 36 .............................. GTATGACTGTGTCATTGATATGCCGGGCGAATATGC 11764 30 100.0 35 .............................. ACTCTAATATCCGATACTTCTTTTGTAATATCTGG 11699 30 100.0 37 .............................. TTTAAATAACAACGTGACTGCCGTGAGTGGAACAATC 11632 30 100.0 35 .............................. ACAAGCTCGCTTTTAGATTCTCTTACACCTTTTGC 11567 30 100.0 36 .............................. TAAGGTGCAAATACTTTTCTCTGTCTCATGTAAAGC 11501 30 100.0 35 .............................. GATAATGCTTTATTATTAAATTTTCGAATTGTTAA 11436 30 100.0 36 .............................. CTTTTTCCGCCACTCTGGCAGACATAGAGGTATCTC 11370 30 100.0 36 .............................. TTTACTAGCTCGCTGACCGGCTTCATGCGGTTGTTC 11304 30 100.0 37 .............................. ATTTTTAAATTATCAATAGTCTCTTTTGATGCTTTTA 11237 30 100.0 34 .............................. GAAAGAAAGCTTGATGGTGTGAGAGAGACTTACA 11173 30 100.0 35 .............................. TGTATTATCAGCTGTTTAATGTGTCGCTGTATTGT 11108 30 100.0 35 .............................. ATATTTCTATACGAACTGAATAAATAGTCTAACTA 11043 30 100.0 35 .............................. TAGTCTACATTAAACTCTCTGCAGATAGCTTTTGT 10978 30 100.0 34 .............................. ATCGGTTATGATTATATAGACGGTGAATTAATCG 10914 30 100.0 36 .............................. AGTACTATGTTTTATGAAAAGTTCCCTATGACAAAA 10848 30 100.0 37 .............................. TACCAAGTTTATTTGGTATCTCAATCTGTGATGAGCG 10781 30 100.0 36 .............................. AAGAGGTTAGATAAAAAATATTTCTACAGAAAAATC 10715 30 100.0 35 .............................. GAAAAATACCATGTAGGAATTTAGTATTTTTTTAG 10650 30 76.7 0 ...............C.G.A...A..TCG. | ========== ====== ====== ====== ============================== ===================================== ================== 20 30 98.8 36 ATTAAAATAGAGACATAATGGAATGTAAAT # Left flank : ACAGCGACAGAAATTAAGAAACCAGATTATGAAGTATACCGTTAACGTTCCATATTATCATTGGAAAAGTTATCAGGATGCTCTAAATTCCAAAAAAACTTCTGGCAGAAAAGCAAAATATTATGAACCAATTCAAATAGGAAAATATGAGAAAATCAAAGTTATGGAATGTAACTATGACAAAAAAGGATATAGCCCGATAGAATGGACAAAGAAAACGGAAGATAATGAATAGCAAAGCATAAAATGTGGATATCGTGTTATTATAATATTTTTGTTTGTGTCACTTTGTTGCGAGATATGTTACATAAAAAATGTCGACCTCCAATAATGTAAAAATCCCCGTACATTGACAGCGATTAAAAAACACGATAAATAGGACATTTTCCATCAATCTTGTAGAAGAAACAAGAAAAATATGGTAAAATATTTATAGCTATTGATAGGTCGACAGAAAGTGGGTGGAAAAGAAAGAAAATAAAAAGAGATGGGGAGGATGG # Right flank : TTGATATAATAAAAAATGGATGAAAATATATGAGAGGAGGAACAAAGTATGGGACGATTTGTTGATCCAGATAATAGTGCATTTCAGGATGCATTAAGTTCAAAAATATATATTGATAAAATGGGATTGATTTCATATACGAACAGTGTAATAGACATGACAGAGTAATTTATTTATTTTTTATCTTCCCCCTAAATTCAAAAAAATTTTGCAAAATATCAAATACTCATATACAATAAAGAACAAGAATATACGGAAGAGGGGGAGTGGCATGATTTCGGATGAGATGGCTTATCGGCAGTATTTGGACGGGAAAGAAGAGAGCGCGGATATTCTTGTTGAGAGATATGGGGATGCACTTACATATTACATAAATGGATATATCCATGATATTCATGAGTCAGAAGATTTGATGATAGAGGCCTTTGCACAGATTTTTGCAAAGGAGCGTCCGATTGATGGAAAAGGAAGTTTTAGGGCATATCTGTATAAAACAGCAA # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAAAATAGAGACATAATGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 45286-45759 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFIQR010000155.1 Anaerobutyricum hallii strain HTF-385 scaffold_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 45286 36 100.0 35 .................................... AATTGTTCTCATTTTTCTTACCTCACTTTTTGTTT 45357 36 100.0 38 .................................... AATTTCTTCTTTGCAATACTTGCAAACTTTAGTTTTTT 45431 36 100.0 36 .................................... AACAACCAGAGTGTGCTTGTAAGATTTTGTTTTTCC 45503 36 100.0 37 .................................... TGATTGCCGAGCAAAACCCGGCGGTGCTTACTTCTTG 45576 36 100.0 38 .................................... TCTACATAATTTTCGACCATAGAGGCAAGGGTATAATA 45650 36 97.2 38 ..................................C. CCTTTCTCTCAGTTCACTATTCCATTGTAGCTTGATAC 45724 35 75.0 0 AC............-A....A.A.......AA..C. | C [45755] ========== ====== ====== ====== ==================================== ====================================== ================== 7 36 96.0 37 GTTTAGATAAGAGAGTCCCCGTGAGGGGACGGAAAC # Left flank : AAGTCAGATATCTTAGAAGCAGTAGCATACTTTTTTGATAATGCCAATAAGCAGTATAAAAAATATGGAGCATTGAGTCAGGACAGAAAATGTGTTATAACAATAGGAGGGGGAGCGGGTTATATCAGCAAAACAGTTCCTTATAATATCTATCCAGATAGAGAGGCAGTACAAGTTGTTTCAAACATATTAGAGGTCTCTGCCCCGAGACATGGACACAAAAACGATGTCAAAAGGGGAGTATCACCCCACACATTAAAAATAACAAAATATGGTGGAAGAATCTATCAATTTGGACAGTGCGAAATAAAAATCACAGAAAATGAAACCCCATTATAGCAAAAACATAGGGCATTCACAAAGCATTTTACCACGCAAGGCTTAAAATAATCCTCTGAGGATGATTATATGAAAACATTAAACTCTTTTATCATTAAAATATCATTTGCCACGCAAACCAGCGAAAAAAGCCGCTTGGGGAGGGAGAATTGGCGGATGGT # Right flank : CACCAGAAAATCTCCATTAAAGAAAGGAGACTCAAATGAGCTTACTCTACATTAATGAAAACGGAGCAGTCATTGGCATTGATGGATGTAGATGCACTATAAAGTACGCAGATGGAATGAAGCGCTCCCTCCCAATCGAATCCTTAGAAGCAATCACGATCATGGGAAAATCACAGATGACAACACAATGTACTGAAGAATGTTTGAAAAGAGGAATCCCTGTTTCCTACTTTTCAAAAGGCGGAGTCTACTTTGGTCGTCTTCAATCTACTGGGCATATTAATGTGGCAAGACAGAGAAAACAATGTGCTTTGTATGATACAGAATTTTCCATAAAATTAGCAAAGCGAATTATTGATGCTAAATTAAGAAATCAAAGCGTAGTCCTTCGTCGTTACGAAAAAAGTAAAGGCCTACAATTAGATGAAATTCAAAAAATGCTAAGTGTCTGCCGGGCAAAAGTTTTCAGATGCGACAGTATCCCGGAGATTATCGGTTAT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAGATAAGAGAGTCCCCGTGAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.60,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 11252-9514 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFIQR010000278.1 Anaerobutyricum hallii strain HTF-385 scaffold_101, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 11251 30 100.0 34 .............................. TTGTATAACCCTTACCAACAGCTTCGGCAATCTT 11187 30 100.0 36 .............................. TCTGGTTTGGATTACAGGGATTTATTAAGGAATATT 11121 30 100.0 35 .............................. CGGCTTGCCTGCTAGTAAATAAATTGCCGTTTGAC 11056 30 100.0 34 .............................. ACAGAGGCGATTTTCCGCATGGCAAATTACCTTG 10992 30 100.0 35 .............................. TGCGCATCGCCAGAGGGTTCTTCTGCTGCGCTTGT 10927 30 100.0 35 .............................. GGAGTAAAGAGATAGGCTCCTCTAGCCGCTATGTA 10862 30 100.0 34 .............................. GTGGAACATCCTATACTGATTTGTACGAAAGCAT 10798 30 100.0 35 .............................. GATAGTCCAGATAGCTTTTTATCAACGGTAAATCG 10733 30 100.0 35 .............................. CGGAAAGCCTGCAACCGCAAAGCGGGCATTTCATC 10668 30 100.0 37 .............................. CCGGTTGTGGATATTGCGGGTACTGTGGATATTGTTG 10601 30 100.0 36 .............................. TAGGAGGTGACCCCCAAAATGGGATAAGTAAATACC 10535 30 100.0 37 .............................. ATGTCAAACCAAATGCCGTATTTAAAATGTTTCTTGC 10468 30 100.0 35 .............................. GCATATTTATTGAACGATGAGCAGGTTATGAACAC 10403 30 100.0 38 .............................. GCTACAACCCTCTTTATGTTTATAATTATATACTAAAT 10335 30 100.0 36 .............................. CTTGTCATACTCGGACAAAACACCAGCAGCATCGAC 10269 30 100.0 35 .............................. TCTCCAGAGATTAGTTTGTATTCTCCCTCTTCCGA 10204 30 100.0 36 .............................. GCATCATTTACGAATACATCACAGATAGAAGCAAGG 10138 30 100.0 37 .............................. CTTTTCCGGTTTCCGCACCATATCAGTACGGTAACTG 10071 30 100.0 37 .............................. AAACAACCCAAAATTTACATAGGCATCATGTCTTATA 10004 30 100.0 36 .............................. CAGGCAGGAAAGTACACCAAGAAAGAGTTTAAAGCA 9938 30 100.0 35 .............................. ACATATTATTTCCGCGTAAGATTGCGGGATACGTC 9873 30 100.0 36 .............................. GCTGCTTCTACAATCATTTCTTCTGTTACAACATAC 9807 30 100.0 36 .............................. AAGGTGCAACAAGTTCCGCAGCAGGTACGCATGGTC 9741 30 100.0 37 .............................. CATGACAATCGGAGTTTTCTTCGACTTCTTTTAACAC 9674 30 100.0 36 .............................. GGATTGATGCCCCACATCGTATACTACCTTATCTTC 9608 30 100.0 35 .............................. GGATTCAGGAAGGAGTTTTCGAGCATTTCGTTGAA 9543 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 27 30 100.0 36 ATTTACATTCCATAATGTATCTATTAATTC # Left flank : TTCCATAATGTATCTATTAATTCCATAAGTTCCTTGTAATTACTTGAACTCTGTAATT # Right flank : CCGTCCTCCAACTACCATTATATCATCTATAGTCTTTCTTCTTTTTCTGTCGACCTCTTTCTATTCTCCTCATCTTATATCCATATTTTTATTATAATTTCGCTCTCAGCCTATATTTATCCCATTGTCGACCTTCCTATATTTTCACATCATTACTGGTCGACAATTTTTATTACCTCTACATAGACAAAAATCTTATTAATAGACTACACTTTACCTTTCACCAAGATTGTAGCTTCATTATAGCATCTATCTCAGCATTTTACAATATTAATCTAACTGGAATAATATTTTTCTTTCTATATTAACATCAATTAGAATCCTAAATATATTGTCATCTCAATTATTTTCTTCTATAATATAAATTTATAGTAATAACATATTGGAATGTAAAGGTTAGTTTAATTTTGAAACTTTCTTTTAACCGCTACATTTTGGATTTTCCTAATCTATACATTCCACTTGTTATTACAGAATGCTATCTACTTCAACAATTCCGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACATTCCATAATGTATCTATTAATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //