Array 1 231069-230741 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAGU010000002.1 Acinetobacter johnsonii strain AJ-1 2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 231068 28 100.0 32 ............................ TAAGGATTTCGACGGATAAGTTGAATGAAAGA 231008 28 100.0 32 ............................ TTTGCCTGCCGGCTCTATTTCTATGGATTTTA 230948 28 100.0 32 ............................ TGCAACCTTTGCATCGTGCTTGTATTTTTTAT 230888 28 100.0 32 ............................ TTGCGGCACACCATCTTTATCAACGTACTGCC 230828 28 100.0 32 ............................ ATTGTTCAATCGATGTTAAGTAGTTTTGGCAC 230768 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 6 28 100.0 32 GTTTGCCATCGCATAGATGGTTTAGAAG # Left flank : CACACGAGGTAAAAGTTCAATGGGTTGGTTCTATGGATGCAAATTGCATGTATTGGTGAATGCTCAGGGTCAATTCATTCAGACCCAACTCTCGAATGGCCATACTTCAGATATCAAGATTCTGCCAAAGTTAGCGCAAGGCTATATGGGTAAGATCTTTGGAGATCGTGGCTACATCAGTGAAACTTTAAAAGATAAATTAGGTATGCAAGGTATTGAATTGATTACATATCATCGCAAGAATATGCGACGAGTGGAATTATCACCAGAGGATGAGATCATGCTGAGACAACGCAATAAAATAGAGACGATCTTTAGCTTGTTGAAGCAGCAATACAATCTAGTAAGCAGCCGTCATCGTTCCATTTCAGGTTATTTCGCTGGGATTTATGCATCCTTATGTGCTTATCAAATCTGCCATCAGAATAAGTCTCAATTTACAACAATCTAAAACTCGGCTTATCCATGATTCGGGTTATTTAATAAAACCAAAACCAAAA # Right flank : AGACTGATTATGAACCATATGTGAATTTAATTAATTTCCCAGCCAATTCTGATCTTTATCCTACATTCATCAACGAATAAAAATAAATTCAATTTATTTAACTACTTAGAGATTAGTATATATCCAGAAAGAAGCATAAATTAAAACCTATGTGATGCACACATGACGCATCACTTTTAAGAATATTCCATTGTTTTTTATCATCAAAGTTTAGAAGAAGTAACCAAAATTTATCCATTACGTAAGCATCCGCTGAACCCCATCGCTATATTTTAATGAGGATCAGGTTTCCATCGGTGTGGTAGTAATTCTTCTATTTGGGTCACTTTATGTGTCGGTAGTCTTTTCAGCACATCACTTAAATAGGCATACGGATCCAGCTCATTCAGTTTTGCTGACTGAATCAGCGTCATGATATTCGCCGCTCGCTGACCACTTCGTAGCGAGCCAGCAAATAGCCAGTTTTTACGTCCCAAGGCCCAGGGACGCATCTGGTTTTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCCATCGCATAGATGGTTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTTGCCATCGCATAGATGGTTTAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 255742-257149 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAGU010000002.1 Acinetobacter johnsonii strain AJ-1 2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 255742 28 100.0 32 ............................ ACAGCACCACGACGAAGTTCACCTGTACGATG 255802 28 100.0 32 ............................ TGAAGAGTTAGACGTAGCAAAGTCGCTGGGTG 255862 28 100.0 32 ............................ AATCATCAGGAGCAAGTTTAATTCCTGTATGT 255922 28 100.0 32 ............................ GTGCTGCATAGAGGGGAGAGGCAAGTTAGACA 255982 28 100.0 32 ............................ ATCACCCGATACCGCGCCACCACCACTTCCAG 256042 28 100.0 32 ............................ TAGACCAAGGTGTTTACCGCGATCTAACAATT 256102 28 100.0 32 ............................ TGTTACTTGAATTGTCATGCTACCCATACCCC 256162 28 100.0 32 ............................ TGTGGTCACAAGCTTACTCATACTTTCACTAA 256222 28 100.0 32 ............................ GTGATGGCCCAGTACGCGGCTCGCCTGTAATC 256282 28 100.0 32 ............................ AGCACCAACCAACATAGTCACAGCTTCGGCAA 256342 28 100.0 32 ............................ TTTACGGCTTTGACGATCAATAAACTCTTGGT 256402 28 100.0 32 ............................ TTACTATGTTGATGGGGATCAATCACACTACA 256462 28 100.0 32 ............................ TCGTACATAGTAAATAAGTGTTGCGATATGGT 256522 28 100.0 32 ............................ CTTATAAATCTCAAGCAATTCCTTATCACCAA 256582 28 100.0 32 ............................ AGTGATTGTTTCAGTTAAAAAGTCTAACTCAG 256642 28 100.0 32 ............................ ACTAGCGGCTTGCCCTGTTCAATTGCTTGCTG 256702 28 100.0 32 ............................ TGATGAGGATATTCCAAGTGACCCAATCCTCT 256762 28 100.0 32 ............................ AACAAGTATTGAATTGGAAAGATGCACCGCTA 256822 28 100.0 32 ............................ TTAGAGGATGGTTATGAAGTTGTACTGAGTCG 256882 28 100.0 32 ............................ ACCTGAAAGTTGGCAAGAAGACCAATGGCCAC 256942 28 100.0 32 ............................ TGTATTCAAACGTGGTTCGTAGTGAGCATTCA 257002 28 100.0 32 ............................ TGAAGAACTGGCAGGAATGACCCCACAAGAGC 257062 28 100.0 32 ............................ TGTTTTCTTAAAATGGTAACTGACTGCATCAA 257122 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 24 28 100.0 32 GTTCACTGCCACATAGGCAGCTTAGAAA # Left flank : TCAAGCTTTACAAAGGCTTTAATTAAGCAAAGAATTGAGGTGGCTCGGCATAACTTCTGTGAGGTGTGTGATGGCTTATTACATTTAGATAGTATTGAACACGACCATATTATCGCACGCTCTGTTGGTGGTCGCGGTGATGTGGATAATGGAACCTTACTGCATCCATATTGTAATCGCTTTAAAGCAGATCGTGAGTTAGAAGAAGCTCGGGCTGATTTATTTGGCTGAAGCTTTGCTGGGAATGCTTGATCATGTTTAAAGCATGATCAAGTATGATGTATTTCTTAATTGAGCTCGATTTTAATGTACAAAGTAGATATTCGCGTTGGACAAGGGTAAAAATTAGATAAACTAAGCCAAAAATAACCCAATATTTTTTAGCTCTTTAACAGTTTAATAAAATCAATAGTTTATGATTATGGTTTAAAATTTAGGTCTTTTTAAAGATTCAGGGCTTAAATCATTGTTATAGATTTATTTTTTACGCTAAAATTACT # Right flank : ATACAACAATGGAAGCCATTACTAGGTTGTTTTATACGAAGATTTAAACTAGAGCGACATATTGTGTCGTATTGTAGAATTATCATTATGTTATAAGTAAATGAGTCGTTTATAATGCAAGGTATTCATTCTAATCATACTTATAAAGATGGAACAACTAAATCCTTCAGACTTAAAAGCGATCTTACATTCTAAACGAGCTAATTTATATTACTTAGAACATTGCCGTGTCATGCAAAAGGACGGTCGTGTTTTGTATTTGACCGAAGCCAAAAATGAAAACCAATATTGGAATATCCCGATTGCCAATACCACAGTGCTTATGCTTGGAACGGGGACATCCATTACTCAAGCCGCGATGCGTATGCTTGCCAGTGCCGGGGTACTCGTTGGCTTTACCGGCGGTGGTGGAACCCCTCTATTTATGGGCTGTGAAATTGAATGGATGACGCCACAAAGTGAATATCGCCCAACCGAATATATGCAAGGTTGGATGCAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCACATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCACATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 265698-271189 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAGU010000002.1 Acinetobacter johnsonii strain AJ-1 2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 265698 28 100.0 33 ............................ CTAAGATGATTTTACTTTGCGTCTGTTCACACC 265759 28 100.0 32 ............................ AACATGCAAAGTGCTTACAGTGCTGGACGTTA 265819 28 100.0 32 ............................ ACTTGTTCGGCATACATCAGGAAGTCGTTCCA 265879 28 100.0 32 ............................ ATGTTCTTTCTCCAAACGCAGACCCTCTTTCA 265939 28 100.0 32 ............................ CGACGCACGCAATGTACGCACAGGTGCTTAAA 265999 28 100.0 32 ............................ GTGATTATGTTACTTCCGTTGCAATTGTTACA 266059 28 100.0 32 ............................ TAAACCCGCCCCCATGAGCGCAGATCGTACAG 266119 28 100.0 32 ............................ TGATAGTAATTACTCAGTAAATTATTGGTAAT 266179 28 100.0 32 ............................ AGCACCAGCAGCAGCAAAACGAGCTAACCAAT 266239 28 100.0 32 ............................ GTTGTAAGAGCCTTTAACAGTTTGAGAGCGAA 266299 28 100.0 32 ............................ GATGAAGAAACCAACAAAAACAACAATAGGCT 266359 28 100.0 32 ............................ AGCACCAATCAACATAGTCACAGCTTCGGCAA 266419 28 100.0 32 ............................ GACTACTGCGAGCCGACAAGTCAGTTCAAATA 266479 28 100.0 32 ............................ TGCTCCTCCGCCTATGGACATAGCTTTAGAAT 266539 28 100.0 32 ............................ CATCGAAGCCTTATGACACGGTTTATCAAGTT 266599 28 100.0 32 ............................ TGTAGTTGCGCCTGATCTCTCCAGTGGACAAT 266659 28 100.0 32 ............................ GTCTTTAATAGACTCATAAAATCCATACAATT 266719 28 100.0 32 ............................ TTGAAAGTAATGGATATGCAATATTTAAATAC 266779 28 100.0 32 ............................ AATCAACACCAGCACCCAAAAGCATAGTAACA 266839 28 100.0 32 ............................ AGACATATCACAAGAAGATTGTAGAAAGTATT 266899 28 100.0 33 ............................ CAAAGCGGGCTTGCTATCAATGCTTGACTATAT 266960 28 100.0 32 ............................ TGCTGAAATCAGTGTATTCACATAGTTCTTAA 267020 28 100.0 32 ............................ TGTATAACTTCCTGTGGGTATGGCAATACTTG 267080 28 100.0 32 ............................ CAGTTCAGGACCCGACCGTGAAAACGCTCCCA 267140 28 100.0 32 ............................ GGACGGCAAAGACACACTCGATTGGGGCAACT 267200 28 100.0 32 ............................ AATTGCCCGGATACCCCTCACGGTCACAATTT 267260 28 100.0 32 ............................ AAGTGCCTGCGCCACGGCGGCTTTACATTGAT 267320 28 100.0 32 ............................ ATGTAACGATTGTTGTCTAGGAAAAAATACTG 267380 28 100.0 32 ............................ TAACGCATGGCTATTACTTGACTGTACCAAGC 267440 28 100.0 32 ............................ CACAACTGATCTACAAAAATTCATCGTAATTT 267500 28 100.0 32 ............................ AACCAAACTGTTTAACACACAAATCTATTTTT 267560 28 100.0 32 ............................ GGGGAAATCTGACGCATATACGTAAACTTGCT 267620 28 100.0 32 ............................ TTTTGGACAGATCAAGCGTATACGCTTGACTA 267680 28 100.0 32 ............................ ACTGAGTAGAATTGCCCCTGAACGATCACGGT 267740 28 100.0 32 ............................ TTGCTTATTTAAAATAGACAGAGTTGTTATAT 267800 28 100.0 32 ............................ AAAAACAAGTACAGCGAGATGCAGACGCTAAA 267860 28 100.0 32 ............................ TGATGTTGCCAAATCCTGCAACTGACCTTTTT 267920 28 100.0 32 ............................ TACGACGAAATCAATAAGCGATAATCTTGTCG 267980 28 100.0 32 ............................ AACCAAATGCAACTAACTGTTCGCGAGAGTAT 268040 28 100.0 32 ............................ CAAAGTACCAATGTCAATAGCGTCATCAGCAG 268100 28 100.0 32 ............................ TTGTAAATTAGATTCAAGTTGAGATTGAGCAG 268160 28 100.0 32 ............................ CGAAGAAAATCAGAAATCTATTCCCCTTACTA 268220 28 100.0 32 ............................ TGAAACTGCTGACCCTCGTTATAGTTATATTT 268280 28 100.0 32 ............................ ATCTTCAGCCTGCTTATCTGTAGATACACGGA 268340 28 100.0 32 ............................ ACGATAGAAAATACAACCTAACTTTGATGAAA 268400 28 100.0 32 ............................ ATTAGGACGTGCTACCACGGCGTTTGCAATAA 268460 28 100.0 32 ............................ TATGTATTCTAGTCAACAAGGAAGCAGGGACA 268520 28 100.0 32 ............................ TTGAGGGTGCAGGGTTTGAGATAGCACGAACC 268580 28 100.0 32 ............................ TATTGGGTAAAGATGCAAAAAAATAAGAAAAC 268640 28 100.0 32 ............................ GATAGTCTGCCCAGCATTTGTAACAGATGTAA 268700 28 100.0 32 ............................ ATCCACAGTAAGCGTCTCTTTCATTTCTACAG 268760 28 100.0 32 ............................ TGTTGGATATTGCTAGAAAAATGGCCTCTTAT 268820 28 100.0 32 ............................ GCAGAAAATGAGCGCGTATCCGCACATTTAAC 268880 28 100.0 32 ............................ CAGCATCCCGCTGCTTAAAACAGCGTGATATT 268940 28 100.0 32 ............................ TTTCGACTATCGCTACGATGCACCAGTGACAC 269000 28 100.0 33 ............................ CCCCAAAGAATTGCGGTCTAAGGAGAGTAAGCA 269061 28 100.0 32 ............................ TTTAGATGTCGTAGCTGCTCAAGTCATTTCTA 269121 28 100.0 32 ............................ CCATTCAGACGCCGTACCCTCTGCATCTAATT 269181 28 100.0 32 ............................ TTAGCTACACCTATTTTGGCTCTCTTAGACTG 269241 28 100.0 32 ............................ CCGAACCTGCACCACGACTATGTATTTTTATG 269301 28 100.0 32 ............................ AAGCAGCACTTGGAAAGCTACAAAGCCTTGTT 269361 28 100.0 32 ............................ AAGGCTTGCTCAGCCGCGCTTAAACCTGCTTG 269421 28 100.0 32 ............................ GCTAAGCCTGTCATTTCACTGTAGAAGTCCTG 269481 28 100.0 32 ............................ AGTGCGTGCGCTAGGATATCCCGCGCCGTAGC 269541 28 100.0 32 ............................ ACAGAAATTACAGTGCAGGTCGCCGAAATTTC 269601 28 100.0 32 ............................ GATTAATGTGGCTATGAATGACGCGTTATTAT 269661 28 100.0 32 ............................ TGTGGGGTAATTCTCGTTCGTACCTGCGGTTT 269721 28 100.0 32 ............................ TGTGGGGTAATTCTCGTTCGTACCTGCGGTTT 269781 28 100.0 32 ............................ TCCGAATAGACTCAAGTATGCGGATGATTCTA 269841 28 100.0 32 ............................ AGAGTGATCCCCCACTCCACTGCAGATTCAAT 269901 28 100.0 32 ............................ GTATAGCCCCGGTACTGCGACGTGAATGGGTC 269961 28 100.0 32 ............................ GTACGACAGCTCGATGGCTGACGCAGGGCTCG 270021 28 100.0 32 ............................ GATCAGATCCGATGACTTAATGTGGTCGTTCA 270081 28 100.0 32 ............................ TGGAAAGTCCGAGGCATACACGTAGACTTGTT 270141 28 100.0 33 ............................ AACGGGATATAAATACCCCTCACTCTCTAATTC 270202 28 100.0 32 ............................ GTTTGATGGGGTATAAATCTGCTTATCATTTA 270262 28 100.0 32 ............................ CAAGCCAAATCACTGCATCTATCTATATTCCA 270322 28 100.0 32 ............................ AACACCAGTAGCTAAGACTTTAGCGACACGAG 270382 28 100.0 32 ............................ GTCTATAACTGTTAAGGAATCGCAAATAATTG 270442 28 100.0 32 ............................ AAGACCTAAACCCGCACCCGTTAGCGCAGATC 270502 28 100.0 32 ............................ GACTATTGCACCAGTCAGGTTTCCCACGAATT 270562 28 100.0 32 ............................ ATTGTGGGATGCAGGAGAGCACAGCACAGCAC 270622 28 100.0 32 ............................ AGTAGGTAAGTTGGGGTTAAAGCTTGGTGCTT 270682 28 100.0 32 ............................ GTGGAGCTAAACCATGCTTGCAATGAATATTA 270742 28 100.0 32 ............................ TTGAGCTTTGCCCAGGTACAAAACAAGACCAG 270802 28 100.0 32 ............................ TTAAAGACTCCTAGTGATGCTCAAAAACTTTT 270862 28 100.0 32 ............................ TGACTTTAAACTTTAGTTTATATCGTTGACCT 270922 28 100.0 32 ............................ AGTAGCAGCAGTAACGTCAGCAGCAGCAATTG 270982 28 100.0 32 ............................ ATGGGATGTAGTTTAAATTGCCTTAAGTTGCC 271042 28 100.0 32 ............................ TTAAAGACTCCTAGTGATGCTCAAAAACTTTT 271102 28 100.0 32 ............................ TGACTTTAAACTTTAGTTTATATCGTTGACCT 271162 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 92 28 100.0 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : TTAGATATCAGATATTGGCTTGATCGTTTAGAAGATTATGTACATATCACTTCTATTCGTGAAGTACCTAGCGACATTAAAGGCTATGCCATTTACAAGCGTAAGCAAGTGAAAACCAATGCTCAGCGTTTGGCACGTCACCGTGTAAAACGTGGGGATATTGGCTTTGATGAGGCTTTGGCAAGATATAGCAATGTGGTGACCACAACGAATTTACCTTATGTCGAAATGAAAAGTCTAAGTACTTCAGACAAGCAAAGTGAAAAACGTTTTAAATTGTTTATTGAAAAGCAATCTGCAGAGAAATCTGAAACTCAGGTTTTTAGCACCTATGGATTAAGTTCGGTATCTTCAGTACCAGAGTTTTGACCCAATATTTTTTTACTCTTTAACAGCTTAATAAAATCAATAAGTTATGATGGTGGTTTAAAATTTGGGTCTTTTTATAGATTTAAGGGTTAAATCACTGTTATAGCTTTATTTTTTGCTGTAAAATTACT # Right flank : AATACAAGTAATGCCATTAATGTTTTGGTATTCTTCTTAGAAATAATCGATTTACCCTAAACGCCGTGCCACAAAGTTAATTACGATATAGCTATAGGTACTTTAGCGATATTGAATACACAAGCGTTATTATTTGCAGGCTATCTACTTGGCTTATCTATATCAAATATTGTAATTATTTTCAAAGTAGGATAAAAAGAAAATATCTCTTCAGAAAGCTAATTAAGTAAATTACCTTTCTTCTTATGACGAGCAATACATAAGCCGGCAACTATATCAAATGTCTGAATTAATAAATTTTTTAAAACTTTTTAGTCCTAAAACGATCGAGCGTAGTGCTAGTTATGTGAGTCGAATTGATCGTCAGACCATTGATATTGTGATAGAGGATGAAGAGCTTTTTATGTATGCCCAGATTGAGGGTACTGACTATTATGACACGAATATTATTTATGATTTAAAAACTGGTATATTGATTGATGATGATTGTAGTTGTCCCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [78.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //