Array 1 94575-93682 **** Predicted by CRISPRDetect 2.4 *** >NZ_VOWB01000015.1 Campylobacter peloridis strain 2016D-0250 NODE_6_length_120917_cov_51.4608_ID_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 94574 36 100.0 30 .................................... TTATGGTGTTAAAGAATTTACTATGATTGA 94508 36 100.0 30 .................................... TTATTATAGCTTTGATGTGCCTTTCACAAT 94442 36 100.0 30 .................................... TAATTAAAGCTAATTGAGTTTTAACATCAA 94376 36 100.0 30 .................................... ACCGTTCCATTTCATTAAATAACATCTAAT 94310 36 100.0 30 .................................... AAATTTTAATTCGGAATGGAGGGAAGTGAA 94244 36 100.0 30 .................................... TACTGAGCAGGTTTTAGAAGATATGCTTAA 94178 36 100.0 30 .................................... CTAGTTTATCAACTTCTGTGAGGATTGTAT 94112 36 100.0 29 .................................... AAATGTTAATTTAATAGGATCAAATATTA 94047 36 100.0 30 .................................... AATAGAAGGTGGTGTCATTGAAGTAAATTC 93981 36 100.0 30 .................................... CGACTTTATAAAAGCTACTTTAATACAAAA 93915 36 100.0 30 .................................... AAAATCTCTATTTTTACTTGCTTTATAAAA 93849 36 100.0 30 .................................... TGGTTATCAGGAAAACTCGTATGGATGATG 93783 36 100.0 30 .................................... TGATCACTTTCAAAACTACAAAAGGTATAA 93717 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 14 36 100.0 30 GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT # Left flank : TGGAACCATCGCAGCACTAATCCCTGCGTTTTTTATTTTAAGGTATTTAGGCATAGGAACTTTGATTTTACTAGCAATTTTGCTTTTTTTAGTCTCTATAAAAATCATTGATCAATACGAACAAGAGACAGGCAAACATGATGATAAGCATATTGTAATAGATGAAGTTGTTGGAGTGTTTTTAGCCTTAGCAATTTGCGGACAAAGCATTTTTACTTTTTTGCTTTCTTTTGTTTTATTTAGATTTTTTGATATCACAAAACCTTCTATCATCGGTAAAATTGACAAAAAAACTAAAGGCGGTTTAGGCGTAATGCTAGATGATGTTTTAGCAGGAATTTTCGCAGGATTATTTAGTGCAGTAATTTATGGAATTTTACTTAAATTTAATCTTTTATGGTTTGATATAAGCATTATGGAGATATTTTAATTTTATATTTTCACTTTAATTTTTACGACAAAATACAAAAAAAGGGTAACTCATAGTAATAGTAGAGTCT # Right flank : ACACTTTTACCAAATAAAGAAAATTAGATGTTTTTCTGGGTAAAAGTGTCTAAAATTATGTTATAATTTCGCCAAGAAATTTAAAAAGAGACTAAAATAAGTGGTTTTTGGTTATCCACGCAGGGTTACAATCCCATTAAAACCATTAAAATTCAAATAAACTAGGTTGTATAAACTTAGTTTTTTTCCTTTCTTTATTTGTTTTTTCATTACTATATTTAAAATCTTGAGTTTTTTCATCATATTCAAAGAGAACTAAATTCTTATCATCATTCATTTTTTCATTAAAAGAAACTCCACCTAATAAAATTTGCATATTATCAAATTGTTTTTCTGTTATAGTTAAAACCCTTATATTTCCATAAGGTGGCAAAATTCTTTCTACAGATTTTATCGTTGTTTTTGCCGAAGTTAATCCTTTGCAAATTTTTACATATACACTAAATTGCATCATAAAAAATCCAAGTTTTATTAATGAAGTTCTAAATTTGCTCGCATTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.56%AT] # Reference repeat match prediction: R [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //