Array 1 1224-2963 **** Predicted by CRISPRDetect 2.4 *** >NZ_VJYK02000279.1 Streptomyces alkaliterrae strain OF1 NODE_279, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1224 29 100.0 32 ............................. CCGTTGGCGGCGGCCCGGCGGTCGGCGCGGAC 1285 29 100.0 32 ............................. GGCGAGGTCTTCGACGTCGAAGCCGCGCTGAT 1346 29 96.6 33 ............................T CAGCACATCTAACCCCTAGGCGGCAAATGGCGG 1408 29 100.0 32 ............................. TTGGTGAGGACTGGCGAGTCGTCACGGACCAT 1469 29 100.0 32 ............................. GCGCCGGTATCGAGCCCGGCCGGGGACGTCGG 1530 29 100.0 32 ............................. ATCGCCCGGGTGGCGATCGGGGCGCTCGGCGG 1591 29 100.0 32 ............................. ATCGCCCGGGTGGCGATCGGGGCGCTCGGCGG 1652 29 100.0 32 ............................. GGGGGCGACGTGACAGCCGTAGAGGGCAGCGT 1713 29 100.0 32 ............................. GGCGCCACCACCTGGTGGGCCGACGGCACCAC 1774 29 100.0 32 ............................. GCCGTGATCCACGCGTCGTGCTGAACGCCGAC 1835 29 100.0 32 ............................. CGCGTCGTCGGCGCCTTCGGCGGCAAGGAGCT 1896 29 100.0 33 ............................. AACTCCAGTTGCTCGACCGGTCGGCGGTTGGCG 1958 29 100.0 32 ............................. TACACCTCCAACATCATGTCCGCGTTGGGCTT 2019 29 100.0 32 ............................. GTGGTCGGCGTAGTCGAGGCTGCTCCCCACGT 2080 29 100.0 32 ............................. TCGACGTCCCAGGTCGCCCGGCCGTAGATCTG 2141 29 100.0 32 ............................. CAGATGCGCCGCCAAGCCGAGATCGCGGGCCG 2202 29 100.0 32 ............................. TGGTCGAGCTGCTGCCGCTCGGCCGGGGTGAG 2263 29 96.6 33 .......................A..... CACGCCGATCCGGCGGTGAAGTGCATCAGATGG 2325 29 100.0 32 ............................. TTCGGCTGGCCGCACCACTGCTTCTGGTTGAA 2386 29 100.0 32 ............................. CAGGCACACAGTTGCTCGATGAGAGCCCTGAC 2447 29 100.0 32 ............................. GTCCGCCAAGTGCTCCGCTCGGCGGCCTCCGA 2508 29 100.0 32 ............................. GGTCCCCGGCTGCCCCGCCTCCAGTTCGCCCA 2569 29 96.6 32 ....................A........ ACCTTCGAGCCGCCGGAGACGTTACGGTCACG 2630 29 100.0 32 ............................. TGCTCGCCACGATCACCGTCGACGACGGCCCG 2691 29 100.0 32 ............................. TACTGCAAGTCCATGACCGGCGCGGCCGGTGA 2752 29 100.0 32 ............................. GCGCGGCGGCGCACCAAGCCGACCGACGCCGA 2813 29 100.0 32 ............................. GTCCAGCACACGGACGCCGAGGGCATCACGGT 2874 29 96.6 32 ............................T CACGGCTGTTTCATCGCGCCCGAGGTCGTCGA 2935 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 29 29 99.5 32 CTGCTCCCCGCGCACGCGGGGATGGTCCC # Left flank : CGAAGGCCGGCGTCGCCTTGCCGATGTCGTGCGTTGTGGCCAGCCACACCGCCAACCGCCGCCCGTCCGCCTCTCCGGCCGGCAGCGCTTCGGCGGCCAGCCGGCGGACCTGCTCCGGCAGCCACCGGTCCCACAGCCTCCCGGCCACGGCTCCACTGTCGGCCATATGCCGCCACAGCGGCAGCCAGCCACCACTGGACCGGTCGTGCTTGGCCCACACCACCCGCGCCGGAGGTGACAATTCCGTACCGAAACGCGGCAGTTCATCCCTCTGCCCTGTCACGACGCGAGTACATCGCGTTCCTGTCCGGCCTGTCCAGCAAACACCGAAATCCGCCCTCTCGACGAGGGACTGACTACGATGCCCCCGATCCGCGATGCACGCGAAACGGTCCCCACCGCCCCGCAGACCGACCCGCCCAACCGGGAGCGAAATGTCCGAATCTCCAATAGTTGCTCAGCCCGGCCACCCGCCGCCCTAAACTCCCAGCTCACCAAGT # Right flank : CGACCTGCGCCCCTCGTCCGTCTGCTCCCCGCGCGTGCGGGTCGTCCTCGCGCCCGACCCGCACGCCGCGATAGCACTCCAGGGAGTCGGCTGCACTCTTGCCTCTGTGTTTGCCATTCCTGAGGCGAGTCGGCGGTCACGGATTTGCGTGTACGCGGCGCTGGCGCGTGTCTCGTAGGTTTCTGCGGACAGTTCGTGGGCCACGATGAGCGTTCGAGGTTTGGGCGGTTTCCCGCTATGCCGACCGCGGGTCCGGGCAGCGTTCGCGGCCGCGCGGGCATGTCAGCAGCGTACGAACGACGATCCGGCCGGGTTCGTAGTAGCCGATGTAGGCGTCCTGGCCGAGTTGGAGCACGCGGTGTGCGTGTTCCAGGTGTTGCGCCACGGGGAGCCCGCCGGGCGCCGGTGTGTGTCCGCCCAGCTCCTTGGCGAGCCAGGCGTACGCCTCGTCGGCGTGGTGGTAGGTGCCGGCCAGCATGGTCTTCGGCTTCCGGAACCAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1457-330 **** Predicted by CRISPRDetect 2.4 *** >NZ_VJYK02000247.1 Streptomyces alkaliterrae strain OF1 NODE_247, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1456 29 100.0 32 ............................. CGGAGTGTCCTGAAGGAGCGGCATCCGGTGCG 1395 29 100.0 32 ............................. GCCGTCAACCGCTGGGACTCCAACTGGCGGCG 1334 29 100.0 32 ............................. CCACCTCATTGATCAAGATGAGATTGCCGGTG 1273 29 100.0 32 ............................. CCCTCCTCAGCTCAGCGCCGCGACGACCGCAG 1212 29 100.0 32 ............................. CAGGGCCGGGGCGGCGGCACCCACGGCGCCCT 1151 29 100.0 32 ............................. GTGGAGCTGCCGGCCGACCCCCTCCAGCACCA 1090 29 100.0 32 ............................. GGCGTCGTCCACGTCCGCCGGCACGATGAAGA 1029 29 100.0 32 ............................. GGGGGATCAAGGGCCGGCCTCGGGGAGCGCTC 968 29 100.0 32 ............................. GGGGGATTGAGGGCCGGCCTCGGGGAGCGCTC 907 29 100.0 33 ............................. GCGCGCTTCACGTTGTCGAGGGCGCGCTGGTAG 845 29 96.6 32 ..........T.................. GACTAGCCCGACGCCGGTAAGCGCAACGATGT 784 29 96.6 32 .............G............... CGACAGGGGCTCTACTCCTTGACGGGAGTCCA 723 29 100.0 32 ............................. GTGCGGAACTACTGCAACCACGTCCGGGCGCT 662 29 100.0 32 ............................. AACTGCCGGTCGCCGCGGTCGTCCGGGTAGTA 601 29 100.0 32 ............................. TCGCCACCGGCGACGACGGCACGGGTACCGCC 540 29 96.6 32 .........................C... TGGTCGTACTGTTCGTGCCAGACCACGGCTGC 479 29 96.6 32 .........G................... GTGATGAGTTGGCGGGGCTTAAGGCAGGTGAA 418 29 89.7 32 .........G..T............C... TTCGACGACCCGGAAGTCGATGAAGCCGGGTG 357 28 75.9 0 .........G..TG.....CC.-...G.. | ========== ====== ====== ====== ============================= ================================= ================== 19 29 97.5 32 CTGCTCCCCACGCACGCGGGGATGGTCCC # Left flank : CCGGCCTGACCACAGTGGTCACAGCACATGGACACCGAGCACATCTTCAGCCACCCAAGAGCCACGCCAAACATGGCAAACGCCAAGAACGTAATCATTTCGCCCCTTCGGTACTTCCGCTGCCTCACCGGGCGCCCCCAGCCGCCGACGCGCAGCAGGATGTCCTACTCCTGACGAATCGTCAAATGCCTGATCGACACGATCACTCGTGCCCGGGTAGTTACTCACCCTGTGGCGATGCGCGCGGAGTTTGCCGACGTGCGCACTGGTGCGCCGTCGCTGGCCGCGCTCCGCCCGCAGGGCAACCTCGTATCCCCAGGTCGTCGCGTCGCGACGCGCCACGGCGGACTGGCCACGATGCTCGTGACCGGTTGCGCACGCAGCAGCGACCGCCTGCCGCTCCACAGACCGCTCCCGGGGGAGCTGGAAGTGAAATGTCCGAATCTCCAATAGTTGCTCAATGCGGCCACCCGCCGCCCTAAACCCCCAGCTCACCAAGC # Right flank : CGCGGGGGCGGCATTGCGGGCGGAACTGAAGTGCCGGCGCAAGCTGATGGCCATCCTCGACCAGTCTGGTCTGTGAGGAGCGAGTGGGCTCGGCGCCCCTTCACTCGTGTGGGCCGCGTCGCTCAGTCCTGGTGACCGGTGCGTGCCTGCGGTCGATCGTACTGACGTCCTCTCAAAGGTGATCACTTCCAGATTCGTCGAGGGCGGGGGCGGCATTGCGGGCGGAACTGAAGTGCCGGCGCAAGCTGATGGCCATCCTCGACCAGTCTGGTCTGTGAGGAGCGAGTGGGCTCGGCGCCCCTTCACTCGTGTGGGCCGCGTCGCTCAGTC # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCACGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.20,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1351-1990 **** Predicted by CRISPRDetect 2.4 *** >NZ_VJYK02000430.1 Streptomyces alkaliterrae strain OF1 NODE_430, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1351 29 96.6 33 ...........T................. TTGGTGCCGTAGGGCGCCGCGACGGGCTTCGCC 1413 29 100.0 32 ............................. CCATTCGGGACGTCCTGGCCGTCGGTGACGAC 1474 29 100.0 32 ............................. TGACAATGCGTATCTTCGGACGCGAGCCTGCG 1535 29 100.0 32 ............................. GATTCCGAGTGGGCGCGGTTCCCCACCTTCCA 1596 29 100.0 32 ............................. TGGCCACGCGTCGAAACCAACCCGAGCTTCCT 1657 29 100.0 32 ............................. GACGGCGGGGCGAGGGTGACGTTCACCGGTCT 1718 29 100.0 32 ............................. GGCAGCACCGCCCGCACCGAGGCCGGCAAACC 1779 29 96.6 32 ......T...................... TCGGGGTCGGGGCGACCCCACGGCCGGTACAG 1840 29 100.0 32 ............................. TTCATGGACGTTTCCATGAAGTCGAAGACGTT 1901 29 100.0 32 ............................. GTCACCCGACCGCGCCGGGCCCACATCCGGTA 1962 29 96.6 0 ..........................T.. | ========== ====== ====== ====== ============================= ================================= ================== 11 29 99.1 32 CTGCTCCCCGCGCACGCGGGGATGGTCCC # Left flank : TCCCTGATGGCCTACTCCGAGTCGGCCCAACGGGGCCATCTTGAGCGAGAACTCGCCTTCGTGCTGCCCATGTTGACGGCCTACCATCAACTACAGGCCGAAGCGCCCTCGCAGGCGGCCTCCGTGGCAATGATCAACCAGTTGCGAAAGGGCACCCCGTGACGACCGAATCCCCCCGCTGGTTCAAGTCCTCCTACAGCGACAACGGCGGCCAGTGCGTTGAGGTCGCGGCCAACCTCGCCGCCTCCCACGGCGTGGTCCCCGTCCGCGACTCCAAGCACCCGACCGGCCCAGCCCTGGCCCTCCCCACCCTCGCCTTCACCACCTTCGTCACAAGCATCAAAACCGGCACCCTCTCCACCCTCTGATCCCCACGGGGCACAGCCCTGCCGGACTTCGCAACACAGGAACCGCTTCGCCCTATTCATGACGACTTGCCGGGATCAATGAAAGTGAGTGAAAACCACCCTCCCCCGCCACAAACCCGCAGGTCATCTAGT # Right flank : CTGGTCCCGTTTCTGGCGGCAGGGGACGCTTCTAGTGCGAGCAACAGCGACGGCGACGCGTGCGCCTTGGGTTCGGGGAACGTGGCTGCGGGGTGGCGATCTTGGCGGGAGACTGGCCGGTATGAGGACAGCGTTTCGCGTGGAGACCGTGCGCGCCGCCGAGCGCGCGTTGATGGACCGGCTTCCTGAGGGGGAGTTGATGCGGCGGGCGGCGGCCGGGCTGGCCGCCGCGGCGGCCGGACTGCTCGGCCGGGTCTACGGCAGCCGGGTGCTGCTGCTCGTCGGCAGCGGCGACAACGGGGGCGACACCCTGTACGCGGGTGCCCGGCTCGCGCGGCGCGGCGCCGGCGTCACCGCCCTGCTGCTCTCGCCTGACCGGGCGCACCCCGGCGGGCTCGCCGCGTTGCGCGCCGCCGGCGGCCGGGTGCTGCCGGCCACCGAGGCGGCCCCGGGCACCCTCGCCGCCGACCTCGTACTGGACGGCATCACCGGTATCGGCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //