Array 1 77592-77865 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAUWV010000009.1 Pseudoalteromonas sp. S16_S37 contig00009, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 77592 29 100.0 32 ............................. AAAAATATTGCAATATAGATAATTATGGGAGG 77653 29 100.0 32 ............................. TTTCGATCTGTTCTTCTAAATCCATATATTCT 77714 29 100.0 32 ............................. ACTCAACATCAAAGGCAGAGGTGTTTGCGCAA 77775 29 100.0 33 ............................. CGGTAACGTTGAGCGCTATAGAGACGGACTAAA 77837 29 86.2 0 .............C.......T.A..T.. | ========== ====== ====== ====== ============================= ================================= ================== 5 29 97.2 32 GTGTTCCCCGTACACACGGGGCTGAACCG # Left flank : TCGGATTTTAGATTTAAAATATGCGGCTCTCTGCCCCATAACAGTACCACCATACCCGACAACGCATTTGGCGTAAAAGCAGGTGCCATCCCCGCCATGCGCTGCGCAAAAGCCACCCACATTGGTAGTCACGACTCTTTAGAAAACACCATTTACGCTTTATACGAAAAATGGTTACCGCAAAGCCAAGAAGCGCTTGGCGACCACCCCGTATTTTTTGAATACCTAAATCTTATTCATGAAGTAGACGAATGTGATTTACGCACCGAGGTGTATCTGCCATTGGTGTGATAAATAGGCTGGTTGTAAGTGGAGATAAGTGTAAAGGGGGGTTACAGTGTTTGTATTGCTACAATTTGTGGGTTTTAAATTTACACTTTATTTCCTTATTGATAAGGTTGAGTTTTAGGTTTTATAAAAACCTTAAATATGTTCTTTAAGAAGTTGGTACATTTCACAGACATATTTTTTACTATATAAAACAATCATGTATATTTAGA # Right flank : GTTTCCAATGGGAACGCTATGGGTATAATATAAACGTATCGTAAGTACAGGGTTTAATCGCAATAACTCATAACAGAACCTTAGGAGTTTGCATGCCAATTGCTAAAAATAATGATGCTTTGTCCCCAGAAGCCTACTTACTTGGAGAACTGAAGAGCGCTGTTAAACATGAGCTGATCGATGGGCAAGTGTATGCAATGGCAGGTGCCAGTGCTAATCATGAGCGGATTTGTCAAAATATGGCAAGAAAGCTGGGTAATCACCTTGAAGGGTCACCGTGTGAACCTTTCGGTTCAGATATGAAAGTGCGCGTACGTGATAATTTTTACTACCCCGATGTGTCGGTGGATTGTCATTTTGATGAATCAGAGCCTTATTTCACAACCACTCCGATTGTTATTGTGGAAGTAATTTCCCGTTCAACCCGAAAAATGGACGAAAAAGTTAAATTACTTGAGTACATCAATATTCCCACGTTAGAAGAATACGTAGTGATCGAA # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTACACACGGGGCTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTACGCACGGGGCTAAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.70,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 88766-91477 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAUWV010000009.1 Pseudoalteromonas sp. S16_S37 contig00009, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 88766 29 100.0 32 ............................. GCCTACATCATGCAGGCCTGTGTTGTAATGAT 88827 29 100.0 32 ............................. CAATATGATGAAGACATAAACGGCTATATTCG 88888 29 100.0 32 ............................. GTGGTGGTAATTCCAATTTTAATTATGGTGGG 88949 29 100.0 32 ............................. TACGGTTGGTTTAGCTTTAAGGTTGTTAGCCC 89010 29 100.0 32 ............................. GTGTTTTACAACGCTGGAATGAGAAAGCTAAA 89071 29 100.0 32 ............................. GAAATAAAGCACTTAGGCCGCACGTTGCGTCA 89132 29 100.0 32 ............................. CGTTGTTATTGCATCCCAAGTTTCTGAGCTAG 89193 29 100.0 32 ............................. GAGAGCAAATAGGCCGTCTTTATATACCTTGA 89254 29 100.0 32 ............................. GGTTATTTAATGAGCGCAAAGTATACGTTTTT 89315 29 100.0 32 ............................. GCATTTGGATAAAATGAAAGACATGGCAAAGC 89376 29 100.0 32 ............................. TCAATGCCCGCAGTTTTGCACATACTTATAAA 89437 29 100.0 32 ............................. AGTTACCACTCCCCAAGTACTCGATAATTGAA 89498 29 100.0 32 ............................. CATTCTTAGCGGCTAACGGAGCTGAGTTTGTA 89559 29 100.0 32 ............................. ATATGGGGATTTTAACAGTTGAAAGGAGAGCA 89620 29 100.0 32 ............................. GGTCTGTATTCAGTCATGGAGCGACAAAAGGA 89681 29 100.0 32 ............................. CTTGTGCTAGCGCGCATTAAAAAGCGCATGCA 89742 29 100.0 32 ............................. TATTGGTACAGAATCATTGATAAATGTTGAGG 89803 29 100.0 32 ............................. GGTGACATTCAACCAGCTAATAGCAATAGGCG 89864 29 100.0 32 ............................. GCTTACGTGTATCGCTCAATTGATGGCACAGG 89925 29 100.0 32 ............................. AGGTTTTATTGACGGCCAAGACTGAGGACGAG 89986 29 100.0 32 ............................. CTTTTACAGTTTAGTAATGGTGCAGCATACAC 90047 29 100.0 32 ............................. GCAGTTGATGATTTTAACGATAACTTTAATTC 90108 29 100.0 32 ............................. TTCGTGCGGTTCAATTGGAAGGTCTTGCAGCT 90169 29 100.0 32 ............................. TCACTACTGGCAGCGCAAACAAACGGCGATAA 90230 29 100.0 32 ............................. GTTGTTAGCCCTAACTTTAGAGGTGCGCCAGA 90291 29 100.0 32 ............................. TTAATGGCAGAGTACAGAATCAGAGTTTTTCA 90352 29 100.0 32 ............................. CTCTACAGCAGAATGCTACTTTACTGTAACAA 90413 29 100.0 32 ............................. AAATTAGACAGGAAGGCGGGGCGGAATCAGAA 90474 29 100.0 32 ............................. TCATTGCGACAGTACAGGCGTAATTCATCACG 90535 29 100.0 31 ............................. CCATATTTACCAATACGGCTTTTCGGGCAGG 90595 29 100.0 32 ............................. CCTTCAGATTCTGTTGACTCGCTAAAATCACC 90656 29 100.0 32 ............................. ATTAATGGAGATTAAAAATCATCTTCTAGTTC 90717 29 100.0 32 ............................. TCATTGCGACAGTACAGGCGTAATTCATCACG 90778 29 100.0 32 ............................. TCTTTTCGCTTTGCTCAGGTTCGACCTCTGGC 90839 29 100.0 31 ............................. CCATATTTACCAATACGGCTTTTCGGGCAGG 90899 29 100.0 32 ............................. GTTAGGTGATATTATCTCGTTGCTATTAACGT 90960 29 100.0 32 ............................. AGAGAGAACCTAGAACAAGGGACAGCCAATTA 91021 29 100.0 32 ............................. CGTGGCAAATAGTATTGAGATCCAGATACTGT 91082 29 100.0 32 ............................. CGTGGCAAATAGTATTGAGATCCAGATACTGT 91143 29 100.0 32 ............................. TGTAGTTAGTGTGAGATCGTGTGATCATTGTT 91204 29 100.0 32 ............................. TTCACAGAGGTAACGGGGCTTGGCTTTTACTG 91265 29 96.6 32 ..........................T.. GAACGACTGACAAGGGCGGAGATTAAAAAATG 91326 29 100.0 33 ............................. TGTGATAATGAGGCCGAAACCCCAAGTAAACGC 91388 29 100.0 32 ............................. ATTTTTTTAATTCACAGGGAAACGTATTTGAA 91449 29 93.1 0 .............A..............A | ========== ====== ====== ====== ============================= ================================= ================== 45 29 99.8 32 GTGTTCCCCGTACCCACGGGGCTAAACCG # Left flank : AACCTGAATCAATAGGTGACGAAGGCCATCGAAGTGGTGGTTCATGATGAGTATGTGTGTGGTAGTGACTGAAACGGTTCCGCCAAGGCTGCGTGGGCGGCTTGCAGTTTGGCTGCTTGAAATTAGAGCAGGCGTGTATGTTGGTGATGTTAGTCGCCGCATTCGCGAAATGATTTGGTTTCAGGTCAGTGAACTGGCCGAAGACGGTAATGTGGTTATGGCTTGGGCAACCAATACCGAATCGGGTTTTGATTTTATTACTTATGGCGAAAACGCCCGAATGCCCGTCGATTTTCAAGGATTGAGATTGGTGAAATATACGCCCAAAAGTGACGAAAGTACCCAGTCGTAGTTTTTTAGTTTTCGTCTATTATTTGTTCTTTAATAATTTGGAAATAGTCGTTTTTAGAAGCATAAAAAATAGAAGGTTTGTACCTAATATTTTTGGTGGATTTTGAATGCGCATTTTTCTTTAATAAAAACAAGTGTATACTTTTAGA # Right flank : ATTTTTAACCATTAACTAAAACACGCTAACACAGCGTTTTATCATTTCATAATCATATTTACAGCCATGACCACCAACAGTACGGCGAAGATTTTTTTGATGGTTGAAACGGGGAGGTGGTGTGTGGCTTTTGCGCCAAGTGGGGCGGTAAACCATGAGGTGCACACAATTCCAGCCAGAGCGGGTAAGTATACAAAGCCTGCAAAGCCGTCAGCTAGGTCAAACTGGGTGCTGCCTGAGCTGATATAGCCAACGGTGCCAAACAAGGCGATAACTATGCCGCATGCAGAGGCGCAGCCGATGGCTTTTTTCATATCGATTGAAAAAAACGTCAGTAGCGGTACCAACAAAGCGCCACCGCCAATGCCTATCATGGCTGACAGTCCGCCCGTCAGGGTGGTAAATAAAGTTAATACCCCTTTATTTGGAAGCTCTCGCACCACGGAAGCGGCATTTTTGCCACTTAAAAACATTTTGATTGCGATAAGCAACACCGTTGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTACCCACGGGGCTAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTACGCACGGGGCTAAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.70,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //