Array 1 901243-903127 **** Predicted by CRISPRDetect 2.4 *** >NC_018412.1 Mycoplasma gallisepticum CA06_2006.052-5-2P, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 901243 36 100.0 30 .................................... AATCGAATAATTATGTTCAGATGTACTTTG 901309 36 100.0 30 .................................... GAAACGGCCGCAAGTTACTTACATACAATT 901375 36 100.0 30 .................................... AATAAATTTAAAATTGCCGATTGTGTTCAA 901441 36 100.0 30 .................................... TTATAACAGATAATAACACTTGACGCGCTT 901507 36 100.0 30 .................................... TTATTTATTAAACGACGAACAAAGACGTTT 901573 36 100.0 30 .................................... TTGGGCTAATTTACCGTATAAACTATTAAG 901639 36 100.0 30 .................................... AAAGCCCCGAACAACTAGCTTTCGAAAAGA 901705 36 100.0 30 .................................... AAAGTTGTATTGTGTTTGAACCATTTCACT 901771 36 100.0 29 .................................... ATTTAACAAAGAATGAGATCGAATTGAGT 901836 36 100.0 30 .................................... AGGTTGTTCATGATTGACATTAAAATTAAA 901902 36 100.0 30 .................................... ATTCAATTGCGTTTTTTAAACGTACAAATA 901968 36 100.0 31 .................................... GCAATAGTTTGTAAGCAAAACGTGGGAGGGG 902035 36 100.0 30 .................................... AATTAAAAGTTAAGAACGTTGTTGCTGACG 902101 36 100.0 30 .................................... TAGTGTATTTTAACCACCGTTCAAGCGCTC 902167 36 100.0 31 .................................... TTTTTTGTTAATGAATTAAAAATCTTATCAG 902234 36 100.0 30 .................................... TTTTTTAAGCTCATCTTCAAGGTGTTGATT 902300 36 100.0 30 .................................... TTTAAGCGTTCCGATCGTTTGTCAAATGTG 902366 36 100.0 30 .................................... AACTTATCTGCATAACCCTTTTGAATCTCT 902432 36 100.0 30 .................................... AAGTTGATCATTTAAATGAGCTTTTAAAAA 902498 36 100.0 30 .................................... TAGTTAAATTAATTTTTAAAGGATGGTTTA 902564 36 100.0 30 .................................... TAATAATCTTAATTTTAGTGTGTTTGTCGT 902630 36 100.0 30 .................................... GAATTAAATTATCTTTATAAGTAAAATAAA 902696 36 100.0 30 .................................... TAATAATCTTAATTTTAGTGTGTTTGTCGT 902762 36 100.0 30 .................................... GAATTAAATTATCTTTATAAGTAAAATAAA 902828 36 100.0 30 .................................... GTTTTGCTTATAAATTGTTACAAGACTTCT 902894 36 100.0 30 .................................... ATTCTGCCGCCACGATATCGATTTCTGTTC 902960 36 100.0 30 .................................... ATGGTGACGAATATAAACCCCAACTTGATC 903026 36 100.0 30 .................................... CAACAGCCGTTGTTAAAATTAAAAAAACTA 903092 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 29 36 100.0 30 GTTTTAGCACTGTACAATACTTGTGTAAGCAATAAC # Left flank : TTGATAAAGAAGTTGTTGCTAAACTTAATGAAACGTTAGGCCGTGATATTATCTCGTTAGATACTTCTTACTCTAAAATTCTGAAATCAATAATCAAGATTTCAGAAGATTATATAGATCATGAATTTATCTATTCATATCTGGAGTTATTACATTGATCAAAAGAAATTAAAACAATTATCCTTAAAGACTTTGATAATATCGATCTAAAAAGGTTGAGTAATTTAACTCAAACTACTAATCTAATTATTATGAAAAATGATATTATCTATGATCTTGAAAAACATTTTGAGTTTTTTGAGACATACTGCTTGATTGATCATGATTATGAAAATATGATTAAGATTGATAATATGCCTTCTTTTGAATATTTATTAGAAGATATTTTCAAAGTTATGGTTGATGAAGAGTTTAAGACCACAATGTCTTTTCATCAGCTAGAAATAATTAAAAAGGAATTAAAAAAGCACATTAATTAGCTTATTTTACTTGACAATGAG # Right flank : CAAAAACAAGTATTTTTTACAAACGAAAAAGTTTTATCATTAAACATATTTAATCTGAAACAAAATTTTGAAATAAATAAACTTTACTTAATCTTTTGTTTCATATTAAACAACATAATTCCAGTTGCTACTGAGACGTTTAAGGACTGTATCTTATCAGTATACATCGGGATCTTGATCTGGTAATCAGCATTCTTAATTAGTTGACTCGAAACTCCCTTTTGTTCGTTCCCAACAATTAGAATTGATTTATTAGCATAATCAACATTATAATCTTGAGCTTGATCACTTAAATTAGACACATAAGATCAAAAGCCATACTTATCTTGTAGATCCTTGATCGCATAAGATAAGTTGGCAACCTCAATTAGATTAAGATAAAAACATGCACCTAGTGATGTTTTTATCACCGTGTTGTTAATACTTGCTTGGTTGTCTTTTTTAAAGATGACCCCAAGCACATTTGCTGCCAAACAACTCCGTAAGATTCCACCAAAATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGCACTGTACAATACTTGTGTAAGCAATAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGCACTGTACAATACTTGTGTAAGCAATAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [78.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //