Array 1 131978-130448 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMPU01000003.1 Porphyromonas pasteri strain JCM 30531 sequence3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================================ =============================== ================== 131977 48 100.0 30 ................................................ AAGTTTCTGCTACCCGAGCTCGGAGGATAG 131899 48 100.0 30 ................................................ TGATTTGACTTATGAAACATTCTCTATCCG 131821 48 100.0 30 ................................................ ATTTTACTGCTACATTATGCTACCCTGCTT 131743 48 100.0 29 ................................................ GGGCTCTGGGAAAAGGAATTATTGCAGAG 131666 48 100.0 30 ................................................ TATCCCATTTAAGATTATCGTTTCACTCAT 131588 48 100.0 30 ................................................ ACCAGGGCGAGGGATCGCCCTGGTAGTAGG 131510 48 100.0 30 ................................................ AACTTCAAGAAAATCAACTTCAAGGACAAG 131432 48 100.0 30 ................................................ TCTATCGCACGCTGTCTGTCGTCTGCGGCT 131354 48 100.0 30 ................................................ GCCTTTACAAGGAATACCTCTGAATCTGAC 131276 48 100.0 30 ................................................ CGCGGGGTCAAAGAAATTGACCACTTGGGG 131198 48 100.0 30 ................................................ AAAGGCTCTCGAGATATTGGTCGCATTTGT 131120 48 100.0 30 ................................................ CGACGAGTCATCTATCTTATCAGGACCTCT 131042 48 100.0 31 ................................................ CTCTATCCTTGTCAAGACGGAGCAGGGGCTG 130963 48 100.0 30 ................................................ AAGCGGTCGGTAAGGGTGGCACTGGACGAG 130885 48 100.0 30 ................................................ TGGGTCATGATTCTAGCAATACGCGTACAT 130807 48 97.9 30 .......................................G........ GGAAATGGTCATTTATACGATAGTTTTGAA 130729 48 91.7 30 ...........A.G.A....G........................... CGCTCAATAATGAGGGGCTGAGGGTGTCAT 130651 48 91.7 30 ...........A.G.A....G........................... CGGTTATGATAGATATAACTTTGGTGGCTA 130573 48 87.5 30 ...........A.G.A....G...............A.........A. AAGGTAGCCTGCATGTTCTCGTTCTTTACA 130495 48 87.5 0 ...........A.G.A....G.....G...................A. | ========== ====== ====== ====== ================================================ =============================== ================== 20 48 97.8 30 GCTGTATTAGCTACTGTGAAAGTACGAAATCTGAAAGCTAATCACAGC # Left flank : GTTGCTTCACGGGTGAGGCCCGCCGCTTGGCTTACCCTCTCTTGTCATGCGAGCCAAGCGACTAAGTGAATACCGCATCATGTGGGTCTTTGTCTTCTTTGATCTGCCTACGGGTACGCCTAAGGAGCGCAAGGCGGCTACCAGCTTCCGCCAAGAGCTGCTGAAGGATGGCTTCACGATGTTTCAGTACTCCATCTATATGCGCCATTGTGCGAGTATGGAGCAGGCGCAGACGCATTTGCGGCGGGTCAAGGCGATGCTTCCCGATGAGGGCGAGGTGGTGATCATGACGCTTACCGACAAGCAGTTTGGTATGATGGAGCATTTCTCTTCGCGTAAGCCTACTGATGCTGTTCAGCTTCCAGGCCTCTTCGATATGCTGTGAGATCTTAGATCGGAAAAGTCGCTACGTAAAGGAAAAGCCCGTGGATATCCACGGGCTTTTCTCTTTCTAAATCCTTCCACTAAGTGCTTGTTGCATAGACTCCTCTGCAGGATCC # Right flank : AGAGACTTGTTTACTACTGCACATCTGGTAGTTATGGTAATGGATTGTTGGTCCGCATAGGGATAAAAATTGCGGACGAGTGGCAGAAAAGTTTGGGCTACGTACGTGGCTCTAATATCTAAGTACGTGGATATTTGGATTGACGTACCTGGTCTTTAAGACTACGTGCATAGATAGAATAATACCACTACGGGAAGACGCTTTTTTCTTCACAAGAACGATGCTTTTCCCTCCGCTGAATAAGAGGAATACTCGCGATAAGGCGCAGGGCTTGTGTATCACTTCGGAGGGGCATAATCGTGTAAACCACTTCTGTCTTCCCGGCTGGGTATTGCTTGCCAATCGGACGGTGTGTGAAGTAGTAATAGAGGGGGCAGAGTTGCTGTAATAGTTGTTTGCGCTCGGTTCAGTAGTGGTTTCATATACGAACTACTATTAGTTCGTAGGCGAAACGAATAGTTATTTGACCCCCAAACGAGTAGTCGTTTGAGTGCAGACCA # Questionable array : NO Score: 2.65 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:-0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGTATTAGCTACTGTGAAAGTACGAAATCTGAAAGCTAATCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.42%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.10,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //