Array 1 30607-25055 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACVUJ010000006.1 Acinetobacter sp. S55 NODE_6_length_142608_cov_32.369066, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 30606 28 100.0 32 ............................ GTGAAAGGGCGATAACCCTCTCACTAAATATT 30546 28 100.0 32 ............................ AACGAGCAGAGGAAATTCCTCATCAAGTGTTT 30486 28 100.0 32 ............................ TTATTGGTCCGCATTCAAAACGCTTCCGATTT 30426 28 100.0 32 ............................ GTATGCAATCGGCTCAGGACAAGAAAAATACT 30366 28 100.0 32 ............................ AATAAAAGGAGATTCTTATTTTACAGGTTTAT 30306 28 100.0 32 ............................ AAATGAAATCCACTTATTAATGGTTTGCATAA 30246 28 100.0 33 ............................ ATTAAATGGCGAGATCAGTGTTACACGTCTTGG 30185 28 100.0 32 ............................ GCAAACTGGATATTGAAAGGCGGCCTAGAGAA 30125 28 100.0 32 ............................ ACATTTCGCGGCCATACTTGTGCTCACGATCC 30065 28 100.0 32 ............................ TCAGCAAAATCGGGTTCAAATTGCTTGATCTG 30005 28 100.0 32 ............................ TGACCAAGTTCATTCGGTGGGTGTGCAAACAC 29945 28 100.0 32 ............................ AATAAAGGCATTAAACCTGTTGAATGTCGTCT 29885 28 100.0 32 ............................ AAACAAGCTGCATTGCGTATTTATCTACTGAC 29825 28 100.0 32 ............................ ATTTCAGGAACATGCACTTTATGCGATTCCTT 29765 28 100.0 32 ............................ TTATCACGTCTGCTAAACGTCCAAAACTGACA 29705 28 100.0 32 ............................ ATATTAAAAAACAAATAGAAAATAAGAGAAAC 29645 28 100.0 32 ............................ TGTGCTTAATAAGTTTAGCGAAAGAAATAGCA 29585 28 100.0 32 ............................ TAGACAATCCGATCCATCTTGTCTTAATTCCT 29525 28 100.0 32 ............................ TTGAGGGTGCAATCGTCTCTCCTGACTGGGCT 29465 28 100.0 32 ............................ CAGATGTTGGTTACCCGATAAACGTTATTCAA 29405 28 100.0 32 ............................ TTTATTGTCTTTAGCAAATAAATCCTGTTCCC 29345 28 100.0 32 ............................ ACAAGAAAAAAAGGCGAAGCCTGCTGAAACTT 29285 28 100.0 32 ............................ AGTCAAACGGCTTTTCTGTAGTCGATTGAATT 29225 28 100.0 32 ............................ GTCACTTCATAGCTAATCTTTTTTTGTATATC 29165 28 100.0 32 ............................ CGTGAAAGTACACATAATATTTTTACCAGACT 29105 28 100.0 32 ............................ TTAGCGTTTTAGTGCTTTAATGCACATTTTTA 29045 28 100.0 32 ............................ TCCAGATTCTTCAATTGATGATGCATGTTCAA 28985 28 100.0 32 ............................ AATGCGAATGCTGCTACTGGTATTGATGTAAC 28925 28 100.0 32 ............................ ACCGAGTCGCAACCATCTTTAATAAAAGAAAA 28865 28 100.0 32 ............................ TTATGCAATTGAAAAAATTTCAGCAGGCTTCC 28805 28 100.0 32 ............................ ACTTCAAATGAGTTCTCAACAGTCATTAGAGA 28745 28 100.0 32 ............................ GTATGAATCTTTGCCAAGCGATTACACAGATA 28685 28 100.0 32 ............................ TATTGCTGTAAAAGAGAGAACAACCTCGTTAA 28625 28 100.0 32 ............................ ATCATCCATTCCACTTATTGAGAATTTTCTTA 28565 28 100.0 32 ............................ TCATCCGTGCGTATAAGCGTACAGAATGTCGC 28505 28 100.0 32 ............................ ATGAAACAATGTCACATTACAATAAAAACTAT 28445 28 100.0 32 ............................ GTGTTCACGGATTAGTGTGTAAGTTGCATAGA 28385 28 100.0 32 ............................ TGTTTTTAGTGGCTGTTCCAAAATGAATGGAA 28325 28 100.0 32 ............................ TGATTATGATGCTCAATCTAAGCCTGAAGAGA 28265 28 100.0 32 ............................ GCAGGGTTTTTTGTCAATGATGCGATAATTTC 28205 28 100.0 32 ............................ TCTGGCCAAAACTTTCGCTACGTCAGCAGCTA 28145 28 100.0 32 ............................ TGACTTTGAGCAAGTACAAAAAGACTTTGGCA 28085 28 100.0 32 ............................ ATACGGACGATGTAAGTGAAAATGTTCCCCAA 28025 28 100.0 32 ............................ ATTTGGAGAAATTCTTTCTTTGAACGGTAATT 27965 28 100.0 33 ............................ AACTTGCAAACGTATGTCTTAAATCATGACAAA 27904 28 100.0 32 ............................ TTCTAATTCAACCCAGCAAGTAGTGATTGCTT 27844 28 100.0 32 ............................ AGAAATGGATTTACACGCAAAGTCAATACTTT 27784 28 100.0 32 ............................ GTGATCGCCAATACCATCGGGTTGGCCAACAT 27724 28 100.0 32 ............................ TTAGGCGGTTTTCAAATGGGTGGTCGTCCTCC 27664 28 100.0 32 ............................ ATCGATATGTTTAAGGTTGTAAAAACGCTCAC 27604 28 100.0 32 ............................ GTTTTGGATAACTCCGCTCAAAGTATTATTAT 27544 28 100.0 32 ............................ TGACTGAGTTTTTTTGGTTACTGCTAAGGTAG 27484 28 100.0 32 ............................ AACTGCAGTTCAGCTGCAGCGGCGAGATCCAG 27424 28 100.0 32 ............................ AGTATGCGTGTCAGTCTGTCTGTCACATCCAA 27364 28 100.0 32 ............................ AGATGATAAAAAGTTTCCTCAAGAAGTTGTAG 27304 28 100.0 32 ............................ TGCCAATAACTCTAAAACTAGCACCATTATCG 27244 28 100.0 32 ............................ TTGCGCTGCTTCATATACGCGCTCGTTTTCTA 27184 28 100.0 32 ............................ ACACGTCTGTGAAATTATGCTCGGTCATGCTT 27124 28 100.0 32 ............................ AGAAGGACAAATAATTGAGCCATTTTGAGTAC 27064 28 100.0 32 ............................ TAGAATGGATGCTCTTGAGCAAGAATTAGTTA 27004 28 100.0 32 ............................ TGACGTTGGTTATCCAATCAACGTTCTACAAT 26944 28 100.0 32 ............................ TGATGTTGTTGGTTCTGGCATAAAGCCCCCTT 26884 28 100.0 32 ............................ GAAAACAACGTGAAATAATCAGCGTTTATCGG 26824 28 100.0 32 ............................ ATTCTGAGTTCGTGTGCAACCATCGTCAGGGA 26764 28 100.0 32 ............................ CTTTGCCGCTTCAACCGCCTCGTAGTCTGCGA 26704 28 100.0 32 ............................ TTTCCAGAGCCAACCGATTCAGCAATGGATTT 26644 28 100.0 32 ............................ TTTTAGGTGATTTGTGTTCACAGGGTATAGGT 26584 28 100.0 32 ............................ ACATTTTTACGCGCAACGGCCCTTGCTTGTTT 26524 28 100.0 32 ............................ ACTAACTGATGCTAAACGAGCGCTGATCAATG 26464 28 100.0 33 ............................ TACTTTTTCAACATTTCTTTCCATGGTTCCAAA 26403 28 100.0 32 ............................ ACCTTTGTTCATTACTGGATTTACGACTACAC 26343 28 100.0 32 ............................ TGTTATTAATCTAATTTTCGACATTATTAACT 26283 28 100.0 32 ............................ TAAATATGTTCCTGTTTCAGATGAGGAACTTG 26223 28 100.0 32 ............................ TAAACTTGATAAAACAGTACGACCCGATTTAG 26163 28 100.0 32 ............................ ACTTTGTAAGTGGCAATAGGTGATTCAACTTT 26103 28 100.0 32 ............................ TTTTGAAAAGTATTGCAAGGATGTATTCGGCA 26043 28 100.0 32 ............................ AAATTGGTTCACGAGTAGAACAGTTGTGCTTT 25983 28 100.0 32 ............................ AATAATAAAAGGGTAGAGCCACATTATTTAGC 25923 28 100.0 32 ............................ TACTTCATTTACTGGCATGGCTTGCAAAGTCA 25863 28 100.0 32 ............................ ACGTCAGGTCATAATCAATTCCTGCAGATGTG 25803 28 100.0 32 ............................ ATTTCAGTATTTAGACCAAATAAACAGGTGTT 25743 28 100.0 32 ............................ AATATACTCAAACATTAATGGTCTTGATATTG 25683 28 100.0 32 ............................ AATGTAAACACGCAAGTTTGCTGAAGGATCTC 25623 28 100.0 32 ............................ TGACAAAGCTAATAATCCAAGAACATCATTAG 25563 28 100.0 33 ............................ AGTTAGAAGAAAAACAAGTAAAGGCTGCTTAAT 25502 28 100.0 32 ............................ ACATTTCGGGCATTCAGCTTGGTTATCACCGT 25442 28 100.0 32 ............................ GCCATTAAGTTATACCGAAGCTACGGCTATCG 25382 28 100.0 32 ............................ ATCATCGGTTAGTACGATTTGAGCTTCTACGA 25322 28 100.0 32 ............................ TACAAATGCTGCATATTATGCGGGTAAGTGTT 25262 28 100.0 32 ............................ TTTTCAGGAACATGCACTTTATGCGATTCCGT 25202 28 96.4 32 ........T................... AACTGGAGAGGCTTACCATCTCCAGTGGTTTT 25142 28 100.0 32 ............................ ATTTTGATAAGTCTAGTTGATCGATCTACACC 25082 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 93 28 100.0 32 GTTCATGACGGCATACGTCATTTAGAAA # Left flank : TAGAGAGCTGGCTAGAACGATTGGTTGATTATGTGCATATTAAAAGACTAAGTGAAGTTCCAAAAGATATTAAAAGTTATGCATATTATTACCGTGTGAATCCGAAAATGGATTTAGATACACGAATTGCTCATCAAGCACGACGCCGTAATATTTCTTTAAGTGAAGCAAAACAACATTTTAAGGAATATGTTGATCAGCCTGTGACTGAGCCTTATGTGAGTTTAAAAAGTCTCAGTGCTAAACGAGAGGAAAATATAGATCGATTTTATAGGTTATACATTGGTAAATCTTTTGCTGATGAAGCAAAAGCTGGAAAATTTGGAACATATGGATTAAGCCGAATGGCAGCAGTTCCAGAGTTTTAACCCAATATTTTTTCTACTCTTTAACAGTTTAATAAAATCAATAAGTTACAGTAGGTCGTTTTTTGATTGGGTAAATTGCCTGAATCTAAGATAAACGCCTGTTGTAACTTGTTTTTTTGCTTTATTATTACT # Right flank : TGCTGTTAACGTTACATTAATCGCTTCTGGCAGTTCAAGGTAGAATATATATCGGGAGATTTATTTTTAAAATTTTGATTGTACAGAGTTGCCATTTTAGGATTAAATTATTTAATGAATATAAAATAATTTATGATCAAATAAATTATATATTCAATAAAAAAACGCACTGCTTCTGACGAAACAATGCGTTTTTTAATAACATTATGCAGGCAAATCAAACCAGATCATTTCACTATCTTCAAGGGCATTAATCGTTGTTTTCTCATCAAACAATAAAGCATCTCCTGCTTTAACAATTTGATTTTCAATCATAATTTGACCTTTCACCACATGTACATAATTGTGTTTCAAGGTTGCCTCGATTTCCAGTGTTTTACCCGCTTCCAATACAGCAGCTTTAACTTCCGCATTTTGGCGAATAAACATAGGAGCATTATCATTAGGTCCAACAATCAAATGCCATTCATTGGGCGCTTGGTGCGGATCAAGGTTAATTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGACGGCATACGTCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCATGACGGCATACGTCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.50,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 10468-11154 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACVUJ010000003.1 Acinetobacter sp. S55 NODE_3_length_303561_cov_30.499384, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 10468 28 100.0 32 ............................ TACACTTCGAGATTCGCATAATGCGCATTGAT 10528 28 100.0 32 ............................ TGATATTCAAATTTACCGTCAAAAGGAATTGG 10588 28 100.0 32 ............................ TATGACATATCACTATAAGAACCGAGCTACGC 10648 28 100.0 32 ............................ ATATTTCTCTGTAAAGCGCACCCAAAACTCTT 10708 28 100.0 32 ............................ CAATATTAGATACGCTTAAGGGTGAAAATATG 10768 28 100.0 32 ............................ TCACTCCTCGCGTCCGCTATTGCGCTTTACCA 10828 28 100.0 32 ............................ ATTGTTCCGTCACTTCTTGAATGGCACGTTCT 10888 28 100.0 32 ............................ CTACTGACAACAAGAAACCTGATGTTAATCAG 10948 28 100.0 32 ............................ ATCTACTGAAGAAAAAATGAGGACGTAGCGCG 11008 28 100.0 31 ............................ GACACGGTTAAAACGCTTTATCTCGATTATT 11067 28 100.0 32 ............................ TACTACATCAAAAAGAACTCTAAATATCTCAC 11127 28 96.4 0 ..........A................. | ========== ====== ====== ====== ============================ ================================ ================== 12 28 99.7 32 GATTCCTATCGCATAGATAGTTTAGAAA # Left flank : CTTAGAAACTCAGCTTTTTCACTAGGTAACAGTTTAGCCTCCAAAATTTCGGCATCTGCAGCCCATTCAAGTGAAAGAGTTTGTAAAACCAGTGCTGAACTTTCTGCAAAATAGTCTTCGGTTCCCTGACCTAAATGAGCATCATATTGACGTAATGCAGTGACACCAAAACGAATAAAATCACGAATCGTTGTTAAGTTCTCTGCTGCTTCCTGCAAATGTTCAGGGCTAATAGTCGGTCGCTCCACTCAGGGGTCTCCAAAAGATGTTGATGCAAAACGACTTATGATACCTTGTTTTGTTGTGGTTTTTAATGCCTAAACGTAATGGGTTCAATTTTAAATGAATTTGACTTTTAGTACGTTTTAACCCAATATTTTTATAACTCTTTAACAATTTAATAAAATCATAAACTTATGAATTACTTTCATTTCTTTAGTTGAAAAGATTTTTAGTCATGAAGTCATTGTTATTGTTTAGTTTATGACTACATTTTTATG # Right flank : AGACGCGACCAGATTTGCTGCGATATATTTAGTGGTGTGTGAAAAATGAAAAAAGTCCTGACGGATAAAATTAAGATTCTAATTAAAAAATGAAATTACGAAATACCATGTGCGCCAGTATATTTGGATTAAATATGACTCCAAAAATCTAAGAAATATTAAAATTTTATAGTCATGTAAATAATGAAGCTAGACACCATTACAAGCAACAGATATCCAAGTTTAAATGCTCAAAGCCCTCCAATGTAATAGCATATCATTCTCATATTTTATTTTTAAAATTCGCTTTATAACATCTTCAATATATAAAATATTTTACTGATTCATCTTATATGAATCTTTTAAATCCAGCTTATTTTGGATTGGTTTTCTGTCAAAATAGTAAGTAAATTCTTTAAAGTTTTAATTTTATGAATCCTTATATTCAAAGTGTCGAATTATCCAAGGCCTATCGCTTACTCAATCATGGACCAACTGTTTTGGTCTCAGCCCAAATTGGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTCCTATCGCATAGATAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GCTTCCTATCGCATAGATAGTTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.20,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 127860-126870 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACVUJ010000003.1 Acinetobacter sp. S55 NODE_3_length_303561_cov_30.499384, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 127859 28 100.0 32 ............................ TACTGGTAAGGGTCGAACTCTTGTTATTGGTA 127799 28 100.0 32 ............................ AAGATCAAACAGCTAAAGCCAAAAGATAAACC 127739 28 100.0 32 ............................ GTTAAAAGGATTACGGCATTTATTGATGATTG 127679 28 100.0 32 ............................ TATTAGTCTAATCCCCGCCATATCAGCATACA 127619 28 100.0 32 ............................ TCCAGATTCTTCAATTGATGATGCATGTTCAA 127559 28 100.0 32 ............................ AAATTGATGGCGTGTAATTGAAACGGCCTTTT 127499 28 100.0 32 ............................ AGTTGATGGAGCAGGGTCTTTACAGGTCACTC 127439 28 100.0 32 ............................ TGACAAGTCGCGAGTGTCTGTGTTGGTGACTG 127379 28 100.0 32 ............................ TTAAAGATTTTCTCTGGCGTTTGTGGGTCATC 127319 28 100.0 32 ............................ ATTCGAGCCTGCACCCGCGGCAGAAGCTGTAT 127259 28 100.0 33 ............................ AAAAAGCGATGAGTATGTTAAGTTTTTACGCTT 127198 28 100.0 32 ............................ GAGAACATTACGCAGGCAGTAGCCCGTGACGT 127138 28 100.0 33 ............................ AATCACATGGCCAAGAAAGGTAAAAGGTTTGGT 127077 28 100.0 32 ............................ CGTTTCTGATTCAATGTTGAGTCGAGCATCAT 127017 28 100.0 32 ............................ AATCATAAATTAAAGGTCGCGAGTAGGGAATT 126957 28 100.0 32 ............................ AGTTAATGCTTAAGTTGTGGTTTAGAGATGGT 126897 28 89.3 0 ........................TTT. | ========== ====== ====== ====== ============================ ================================= ================== 17 28 99.4 32 CTTTACTACCGCATAGGTAGCTTAGAAA # Left flank : TTTAGGATTGTATCGCCGCTTAATTTTCCACTGGCGATGGGAGTGAGAACACCGATAGTTAAGATAATAATGCCAATATTTAAACCGTGTTGTTGCAAATAAGGGAAAAATTGATTGAGAGGAGTCAATTTGAAAAAGATGAGAACACCAGCGGCAATAGTGACTGCGGCATTTTGACTGAAGATACCACAAGCCAGTAAAACGAGTAAAACCAACAGATTGACATCAAGCTGGGACATGATCATGGTAATAAAAGCGTGTATGTAGGGAGTACTGTATTGTATAACGTTTTTTTATTTTACCAATGGTTGAAAAATATCATTTTTCTTTTTAAATATTTATAATGAAGAACTATATTAGCTTTATATACCTAAATATAGTTAGACTCTTTAATAACTGAATAAATTCAATAGATTAGATTTTGGTTGAAAAACTTTGGGTAAAACGCTGTTTTATAGCTAACTTGTTATTGGATAATTTATTTTTTATGCTAACTTACT # Right flank : TATCCGAAATGAATATCTACAAGATGTTTTATTCAAGGTGTTAAATTCATAAAATCGGTTAAACTATCGTATCGATTAATTTGGATGTTGTTATGCTCTTGGAAAAAATGTTGCAGTCACAAGGGTTTGGTTCCCGTAAACACTGTCAGCAACTGATTAAAAATGGAGCAATAACAGTTCAGGGCGAGGTACAAACAGATTTAAAATTTCGTGTTGATGTGAAAAATCTAAATTTTTCAGTATTTGGTCAAACTTATGTTTATCGCGAAAAAATCTATATCGCCCTTAATAAACCGCAGGGTTTTGAATGTTCACATCATCCGCAGCATCATCAGAGTGTATTCGATTTGTTCCCTGACATTTTAAGAGAACGTGGACTGGCGGCAGTAGGGCGGCTAGACCAAGATACAACTGGATTATTATTACTCACCGATGACGGCAAATTTTTACATGCGCTTACTCATCCCAAACGACATGTTCCTAAAGTTTATCATGTCACT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //