Array 1 2913-650 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSEZ01000035.1 Phocaeicola vulgatus strain AM44-21 AM44-21.Scaf35, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 2912 33 100.0 34 ................................. GAAGAAACTTGTGGGGTTGAAGTCTGTTGTAGGG 2845 33 100.0 32 ................................. TAGCAAGCTTATGATCTTCCTAATACAGACGG 2780 33 100.0 32 ................................. CAGACAGGAAGAAGAGGACAAACGGCAGCTGT 2715 33 97.0 33 ................................T TGTATTTTTTCTCCTCGTAGATTTTCTCCAATT 2649 33 97.0 33 ................................T TATTTATCTTCCGGAATGAAATCTTCTTTTATA 2583 33 100.0 31 ................................. GGCGGTTCCTGAAGGAGAACAGTGAACTTTT 2519 33 100.0 32 ................................. GACTTGCATTGTAATCACGATCTATTATAGCA 2454 33 97.0 33 ................................C GAAAATAGGGACGAAGTGGGACAGGATCTTAAT 2388 33 97.0 33 ................................G GAAAACCAGCAGAAGCCCTATACTACTTTATGG 2322 33 97.0 32 ................................T GAAAACATACTGTACGATTTTCTACTATCTTA 2257 33 100.0 32 ................................. GCTATGAGAAAGAAATACGCTAAAAAACAATT 2192 33 97.0 32 ................................G ATGAAATACTTGAAGCTAACAGGGATGTGCTT 2127 33 100.0 32 ................................. TGTCAAACACGCCTGTAAACCATTCTACAATA 2062 33 100.0 35 ................................. GCAGCTTTGCTGTTTCCAATGTTACAAGTTCTTCG 1994 33 100.0 31 ................................. AATCAGGTATATGGATATCCAGATTATCCGG 1930 33 97.0 33 ................................T TTTGATTTTATCTGTTGATCTAAACCTCCTATA 1864 33 97.0 32 ................................T ATTTCATTTGCACCGTTGGATAATTTTGTAGG 1799 33 100.0 33 ................................. TGTCTGCCTTGCTTATTTCGGTTGCCAGATTGG 1733 33 97.0 33 ................................G TAGACTGATTGAAATCTTCACCGATAAGGGTGA 1667 33 97.0 32 ................................C GTCCTCCGGAACAACTGGAGGGTGAAGCCTTT 1602 33 97.0 33 ................................C AACAGTTGGGGGTGTCCGTAATGGGGCGTTCCG 1536 33 97.0 33 ................................T CTGACAGTAATATAGATACTTTAGCAGTAGATA 1470 33 97.0 33 ................................T CATGATGCGATACCGTATCAGTGATATGGCGGA 1404 33 100.0 33 ................................. AAAATGGTCTTACAACAACAATCTTATAGGATG 1338 33 100.0 32 ................................. TTATGCCGTTATGTTTAATGATTTTAAGCCAT 1273 33 97.0 32 ................................T CCCGAATATCTGACATATTATGCTGTGATATC 1208 33 97.0 31 ................................C CTTGAAAAGAGAAGATATCATGTTGCTGTTC 1144 33 97.0 33 ................................T TACTGGGAGATGATATCCGATCTGGAGAACGGA 1078 33 97.0 33 ................................T TTATTAGAATGATACACAACAACCAGCAAGAAG 1012 33 97.0 33 ................................T TTATTAGAATGATACACAACAACCAGCAAGAAG 946 33 97.0 32 ................................C ATGACGACCCAAAGCATAATAATCTTAACTTA 881 33 97.0 32 ................................T CTCCTCCGTGTATAGTTGCATTTATATCTATT 816 33 93.9 33 .............................G..T CGAAATAGCGTAGCGATCCTTGCTCATCACAAG 750 33 100.0 33 ................................. CGCAATCCACCACTATCATAGCTCGGATGAACT 684 33 93.9 0 ....................A.........G.. | TA [661] ========== ====== ====== ====== ================================= =================================== ================== 35 33 97.9 33 GTCACACCCTGCGTGGGTGTGTGGATTGAAACA # Left flank : ATATTGACGATTATCCGGTATTTCTTATAAAATGATTTTTAATTATGTACATTCTTGTGACTTACGATGTGGATACTACAAGCAAAGAGGGGGCTCGCCGTTTACGATGTGTGGCCAAGGCTTGTCTGGATTATGGACAGAGGGTGCAGAACTCAGTCTTTGAGTGTGTAGTGACGGAAGCGCAATATTCTCTTCTAAAAGGGAGAGTTAGGGATATTATTGATATGTCTCTTGATAGTGTTCGTTTTTATATTCTTAGTAAAAATGAGAATAAGAGGGTGGAAGTAATAGGTGTTGAAACGGCGTATAAACTTGAGGAGGCTCTTATAATATAATGCGAATGTGGTGTGTTACAAAAAAAGTAGTATCTTCGCATGTGTTAATAATCAGTAGATTAAATTATTTGTAAAGTATTTCTTCGTTATGAAGTTGAATAATAATGATGATTCGCATAACAGTGGATTAAATTTGCTGATTTATAATATGTTATTAGATATAGA # Right flank : TTGTTCACTCGTTGGTCAAGTTTATGGAAGAATTGTAAGCATTCGGCCTCTTGTGTATTTCTCTTCAAGCTGTTATAAAGTCAAAAGCCAAACGAAGTACGTTAGGCTTTTGACTTTGTTATGACTGGAAAAAACACGCACAATCCCGGATGCTTATCTTTTGTCTGTCTTCTTTTGTGGTTTCACCTAGGTGACAATACATTGGCATCTAAGTGGAGAGGCGTAGTCACCCAAGTGATACGCTTGCTTCACCTTGGTGAAACTATAAATTCAACTAAGTGTTTCAAAGCAAATATATTATATTTTTACTATACTATCCCTTGTTGCTTATTTGTTATGTTATTGATTATTAATGTATTGTTATCTGTTTGTATCGATTGTTTTTCTTGTCTTTATAAGATATATTAAAACATAAACTAACATGAAAATTGGTATAATTGACCTTTGTAAACAAATAGAAGATCCTAGGATGAACCGCAAAAAAGTCCATAAAATGGAAA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCCTGCGTGGGTGTGTGGATTGAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //