Array 1 894583-894879 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABEII010000002.1 Streptococcus canis strain NCTC6198, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 894583 36 100.0 30 .................................... TCAAAAGAATTTCATCATGAGTAACTTCAC 894649 36 100.0 31 .................................... CCAAGCCAATTTATTTTCCGTATTAACCAAC 894716 36 100.0 30 .................................... GTATCCATCTTTTTTAATGGATATATATAA 894782 36 100.0 26 .................................... TAGAAGAAAGATGTCAATGAGTGAAT 894844 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 5 36 100.0 30 GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : CACAGCCTGACGACGTCCACAGCGAGCCTTGTTCGCCTTATAGTAATGATAGCACTCAGTTGGCTGAATGCCCTTGTTTGAGGAAAGTCACTACCTTATGAATGGTTTGACGGCTTCGCTTAAGTGATTGCGCAATTTCGAGGACAGAAGTATCTTTCTCAACAGATGCCTCTATCATTACGAGCTCATTTGTGGTAAGATGGGCATGGGTCATTTATGTTACTTCCTTTCAGACAAATGTGGTGTTTATCTGAGCCTAACATAGATGGCTTTTTCTGTCTAATTTAATTTTACAAATTGGGCACATAAAAAATTGTAAGGCGACAGAACAAAGGAGAAAAGAAGGTTTCATGCGTTTGTCGTGCTGGGATAAGAAGGGAAGTTGATTCTATAGGTTTTTTGGCGTATAATGGAGCTATGAAAAGGACTGTTTAAGACTAAAGTCTAGCTAAGACAAATAGTGCGATTACGAAAAATTGTGGACGAAAATAGTCTACGAG # Right flank : CTTGACAATCAATGAATAGGTTACACTAAACTAGACAGTCTTATAAAGTGTTCTACACTAAAGAAAATAGGAGAATATTATGTCTAGAAAAATACGTCGCCACTTCGCCGACGACTTTAAGCAACAAATCGTTGACCTTCACAATGCAGGGATGAAACGAAGTGAGCTTATCAAAGAATATGAGTTAACCCCATCAACCTTCGATAAGTGGGTACGTCAGGCAAAAACAACTGGTTCCTTTAAAACTATTGATAATCTTACAGATGAGCAGCGTGAGCTGATGGAACTCCGAAAGCGTAATAAAGAACTCGAAATGCAGCTAGATATCCTAAAGCAAGCGGCGGTGATTATGGCACGAAAAGAGAAGTAATCACTGCTAACAAAGACAAATATAGCATTTCAGCCATGTGTCGGTGGTTGGGTATTCCTCGTTCTAGCTATTACTACAAAGCTGTGGAATCCGTATCTGATACCGAGCTTGAAGAAAAAATCAAAGCTAT # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.06, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 2 896132-896366 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABEII010000002.1 Streptococcus canis strain NCTC6198, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 896132 36 100.0 30 .................................... TCAATATTTTTTTCAATGGTAAGATCATTC 896198 36 100.0 30 .................................... TTTTGGTAGAGCAACTAACTCACCAAGACT 896264 36 100.0 31 .................................... TCACACTCAAAGTTTACGCTCATCAGATAGA 896331 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 4 36 100.0 31 GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : GTCGGTAATGGTTGGGCTTATGTTTGCTTGATTATTAACCTCTTCAATCGTGAAATCATCGGTCTGTCAGTTGGTTGGCACAAGACCCCCGAATTGGTCAAACAAGCGATTCAGAGCATCCCTTACGCTCTGACCAAAGTCAAGATATTCCAGTCAGATCGTGGGAAGGAGTTTGATAATACTTTGATTGATGACATGTTGGAGGCCTTCGGAATCACCCGCTCTCTTAGTCAAGCAGGTTGTCCTTACGACAATGCCGTTGCTGAAAGTACCTATCGTGCTTTCAAAATGGAATTTGTCCACCAGGAAACTTTCCAGACGCTAGAAGAATTGGCCCTCAAAACTAAGGACTATGTCCACTGGTGGAATCACCACCGCATTCACAGCTGCCTCAACTACCAAACACCGATGACCAAACGTTTAGTCGTTTAGAAAAAGCACTTTATAAAATCTGTACAGAAAAGTGTTGCCTTTTCACAATTTACCTTTGTACTTCCGAA # Right flank : CAGATAATACCGCTTGTTGTTGATCTTCGCTTCTTTCTATTAAAATGTTTTCATGTTATAATAGTCAAAAGGAGAAAGAGAGTGGAGCGATGGAACAAACATTTTTTATGATTAAGCCTGATGGGGTGAAACGAGGGTTAGTTGGGGAGATTTTGCGACGTATTGAGCGGCGAGGGTTTACATTTGAACGCTTGGAGTTGCGGCAAGCTAGCTCGGAACTCTTGGTTAAGCATTATGAGGCCTTGGTTGCGAAGCCATTTTATCCTGAGTTGGAAGCTTACATGACCAGTGGCCCTGTTTTAATTGGGGTACTTTCTGGGAATCGGGTGGTTTCGTCTTGGCGAACCATGATGGGGGTAACTAATCCCAAAGATGCTCTTCCTGGCACTATTCGAGGTGATTTTGCTCAGGCTCCTGGTGATGATGGTGGCATTTTTAACGTGGTTCATGGGTCTGATTCTCTAGATTCTGCTAAGCGTGAGATTGCCCTTTGGTTTAAC # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 3 1264323-1263827 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABEII010000002.1 Streptococcus canis strain NCTC6198, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1264322 36 100.0 30 .................................... AATTGTCTGTGTAAACATCCTCATGCACAC 1264256 36 100.0 28 .................................... TGTCTTTGGCCGCATACAGATCAATAAG 1264192 36 100.0 30 .................................... AAGCAGAGATGGACTTTAAAGCTCACTTTA 1264126 36 100.0 30 .................................... TGGAAAAATGATGAGTGTGGTAGGTTGATT 1264060 36 100.0 30 .................................... GGATCATCGTGACATTGAGTATGGGGCCAT 1263994 36 100.0 30 .................................... CATAAAGATGCTGCATATGGTTAGCTATTA 1263928 36 100.0 30 .................................... AATTACGCGAGAGACAATTTCGTCGGGAAT 1263862 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 100.0 30 GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : TTAGCAGCCACAATAACGGAATTGATTGCTTATGAATGCTTAGAAAATGAGTTGGATTTAGAATACGATGAGATCACCATTTTGGAACTGATAAAAGCTCTGGGAGTCAAGGTTGAAACACAAAGTGATACTATCTTTGAAAAGTGTCTTGAAATTTTACAAGTTTTCAAATACCTTTCAAAAAAGAAACTTTTAATTTTTATTAATTGTGGTTCTTACCTTACAAAAGAAGAATTATTGAAGATAAGAGAATATATTGACTTGTCTCAGCAAACAGTTCTTTTTATAGAACCAAGAAAGTTATACAATATTCCCCAATATATTTTAGATGAAGATTATTTTTTGATAAAAGAACATACAACTTAGACTACATTCGTAAATGTTGATTCTATAGGTTTTTTGGCGTATAATGGAGCTATGAAAAGGACTGTTTAAGACTAAAGTCTAGCTAAGACAAATAGTGCGATTACGAAAAATTGTGGACGAAAATAGTCTACGAG # Right flank : ATCAACCTGTCTTAAATTTCTTTCTGACATGTTTTAGTGAAAAGGCAACACTTTTCTGTACAGATTTTATAAAGTGCTTTTTCTAAACGACTAAACGTTTGGTCATCGGTGTTTGGTAGTTGAGGCAGCTGTGAATGCGGTGGTGATTCCACCAGTGGACATAGTCCTTAGTTTTGAGGGCCAATTCTTCTAGCGTCTGGAAAGTTTCCTGGTGGACAAATTCCATTTTGAAAGCACGATAGGTACTTTCAGCAACGGCATTGTCGTAAGGACAACCTGCTTGACTAAGAGAGCGGGTGATTCCGAAGGCCTCCAACATGTCATCAATCAAAGTATTATCAAACTCCTTCCCACGATCTGACTGGAATATCTTGACTTTGGTCAGAGCGTAAGGGATGCTCTGAATCGCTTGTTTGACCAATTCGGGGGTCTTGTGCCAACCAACTGACAGACCGATGATTTCACGATTGAAGAGGTCAATAATCAAGCAAACATAAGCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 4 1547828-1546135 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABEII010000002.1 Streptococcus canis strain NCTC6198, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1547827 32 100.0 34 ................................ AACGTCTCAACAGATTACTTGCTTGGTCGCACTG 1547761 32 100.0 34 ................................ GTTAATAATTGCAGTCCCAAAAGCCCCGTTACTT 1547695 32 100.0 35 ................................ AACACGATAAAGAATATCTTAAAAAAATAAAAAAA 1547628 32 100.0 36 ................................ AGCTTGGGAAGTGGGCAGGAACAAACCTCTAATGGA 1547560 32 100.0 36 ................................ ATGGATTGATCAACAGAATCCTTAGTAAACTCTCCA 1547492 32 100.0 33 ................................ TGCTTTACAAACCGTCCTATTATCAAGTCTGTT 1547427 32 100.0 36 ................................ GCCTCTGGTCTGTCCAGTCAGCGTCAAAATAACAAG 1547359 32 100.0 34 ................................ ATTTGTATAGTATTGAAAGACATTCCCTTCTTTG 1547293 32 100.0 33 ................................ CAAAGCAAACTCAAGATTTTTAAAAACAAAATC 1547228 32 100.0 34 ................................ TTCCTCTATGGTGGCCAATTTTGCTGAAGCAATT 1547162 32 100.0 34 ................................ CGTGAAAATAATTTTGAATTGCTTATACCAAAAG 1547096 32 100.0 33 ................................ TTTCCATGCCTTGGCAAAATCCCCAGACGACAT 1547031 32 100.0 34 ................................ GACTGTGTAGCCGAAAATTACCGCGTCCACTAAT 1546965 32 100.0 34 ................................ GGCACCCATTTCAAGCGAGAAGACGGCCACAGCT 1546899 32 100.0 35 ................................ ATTTTTTGCATAACACGAGAAAATGCAGAGCCCCC 1546832 32 100.0 34 ................................ AACGTGCTTAAACACAGATTGGTTAATGCTGTTT 1546766 32 100.0 34 ................................ CCTTTGGGATAACCACCTGCGTATTGTCGCTAAA 1546700 32 100.0 36 ................................ TTTCGTCAGCGGATCTTTCCATTGTCATGGAACAAC 1546632 32 100.0 36 ................................ TGCTTTGATGGTTTTTCATGGGCTCTCTAACAGCAC 1546564 32 100.0 34 ................................ TGTCCATAAATGTCAATGTCAAATGCGCCGCCGT 1546498 32 100.0 35 ................................ TATCACTAAAGATATCAATAAGTCGACCAATCTCA 1546431 32 100.0 34 ................................ CTTTAATAAAGATAAAGCTGAAATCGATAGATTT 1546365 32 100.0 34 ................................ TTGCTATTTTGATAGTACTATAATAACATGTAAA 1546299 32 100.0 34 ................................ TCTTACAACTACTACGACCACGCAGCTTCCGCTG 1546233 32 100.0 35 ................................ ATCAGTTGTTGTGCTACCTTTTGGTGCAGAAGCCT 1546166 32 75.0 0 ......T..G...........AC...A..CTC | ========== ====== ====== ====== ================================ ==================================== ================== 26 32 99.0 34 GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Left flank : AAGGCCATACGAGGAGATTTAGAAAGCTATCCACCTTTTATGGTTTAGGAGATGTTATATGATGGTTTTAGTTACTTATGATGTAAATACTGAGACATCGGCTGGTAGGAAAAGATTACGTCATGTTGCCAAACTCTGTGTGGACTATGGGCAACGTGTTCAAAATTCTGTTTTTGAATGTTCTGTGACACCCGCAGAATTTGTGGATATAAAACACCGCTTAACACAGATTATTGATGGGGAAACTGATAGTATTCGCTTTTATTTATTGGGTAAGAATTGGCAGAGGCGTGTGGAAACACTTGGTCGCTCAGACAGCTATGACCCAGATAAAGGTGTCTTATTATTGTAAAAACGTTTAGTGCGACTCGAGGTTTCACAGAAAAACCTAGCTTGCTCGCGCAAAAATAACTTAAAAAAGAATCGAAATGGAGATAAAAAGGTTTAAAATGCCTCTGTATTCTCCAGCCGTTTCTCTATAAACTGTGTCATTTGGCGCA # Right flank : CTATGTTTTTGGCAGTTCTGTTTTGTGATTTTCTCTGTTCACAAGTTTCCAACTGTTTTGTCTCTACTTTTTCTGTCCTATATGCTATAATATGCCTAAATAACTATGGTAAAGGAGTTAGGATGACTAAGGTTCGGTATGGGATTGTGTCGACAGCGCAGGTGGCCCCTCGTTTTATTGAGGGTGTACGCTTTTCGGGCAATGGCGAGGTTGTGGCGGTGTCTAGTCGGTCACTTGATAAGGCAAAGGCTTTTGCGGCAGCGCATCAGTTACCTAAGGCTTATGGTAGTCTTGATGACATGTTGCTGGATACGTCGATTGATGCTATTTATGTGGCAAGTATCAATCAGGATCATTTTCCTACAGCTAGGAAGGCTTTGCTGGCAGACAAGCATGTTCTCGTGGAAAAACCGTTTACCTTGACAACCGCTCAGGCTGAAGAGCTCTTTGCCTTAGCGCAGGAGCGTGGCTTATTTTTGATGGAAGCTCAGAAGGCTGTC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //