Array 1 454740-452826 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF158898.1 Oscillibacter ruminantium GH1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 454739 33 100.0 34 ................................. TGGGGTTATCAATGCACCGGGTATTTTGCCCCCA 454672 33 100.0 36 ................................. CTCAATGTCTTCAATCTCCGGTGGCGCATAGTCAGG 454603 33 100.0 34 ................................. ATTAGCCATCAGATATGTTGCATCGTCGATCACG 454536 33 100.0 34 ................................. ATTTCATCCATTCAAGGAATTTGTTAATGCTGCT 454469 33 100.0 34 ................................. AATCCGTATCCACCTCCAGTCCCACCCACCACAC 454402 33 100.0 35 ................................. CTTTCTTACTGCGTTCCGGTTTTCTCCGCTACCCA 454334 33 100.0 33 ................................. TTTTTCGCAAACGCCATTGCGCAGGACGAGCTA 454268 33 100.0 34 ................................. ACGTAGGTCACACCGTCCACCAGCGTGTCAATTT 454201 33 100.0 34 ................................. GCCGCCGTTGCTGTCGTTGCTGGTGGACGTATTG 454134 33 100.0 34 ................................. AATGCACAGGTATCCGTTGGAAAGCGCCTGCGTG 454067 33 100.0 34 ................................. ATGTCGGGTGTGTTCATAATGTACCTCCAAAAAA 454000 33 100.0 34 ................................. CTCCTAGGTGGTTGGCAAAGAAATTCCACGCGGA 453933 33 100.0 34 ................................. GGTCAACAGCCAGACAAAATGACGTCACGGCAGT 453866 33 100.0 34 ................................. CTCACGATGAATCTTTAGGTCTGCATCGTATAAT 453799 33 100.0 33 ................................. GTCGTAGGTGACGGCAAAGCAGCCCTGCTGGAC 453733 33 100.0 33 ................................. CCCTGCAGTGATGGGAGTATTGCACTTGTACAT 453667 33 100.0 34 ................................. TATGATTTCCTGCAGGGCGCCCGCGGTGCCCGCC 453600 33 100.0 34 ................................. CATTAACCCGGAAATAGCGTTGACCGTTGCGGCA 453533 33 100.0 34 ................................. TTATTTCAAAAAGTATCGCGGCCTCTCGCCGCCC 453466 33 100.0 37 ................................. TCACACTCGACCACAACGCGATGTTTCAAACTGACTG 453396 33 100.0 35 ................................. ACAGCGCACCACAGCGCCGTAAACTGCGGACAGAC 453328 33 100.0 34 ................................. TGTCTGCGTTACGTTACGTTTCTGTAACGTTACA 453261 33 100.0 36 ................................. CGCCGCAATGGTGTCAGCGCAAACAGTTTGCGGAAA 453192 33 100.0 34 ................................. ATTTGGATCAACAACGTCATTCAGATCTGTTCCA 453125 33 100.0 34 ................................. TACCGGGAGGCAGAAGAACCGTGCGGCGCCAAAT 453058 33 100.0 33 ................................. ATCTGGCGATGAGCGTGAGCGCCTTTTTGAGCG 452992 33 100.0 34 ................................. ATTAATGCCGGTAGCCGCCAGACCGCTGACAATG 452925 33 100.0 34 ................................. CATGAGCCACGAGATCAATTTGCGGCGGGAGACA 452858 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 29 33 100.0 34 GTCGCACCCCGCACGGGGTGCGTGGATTGAAAT # Left flank : ATGCTTATCCGCCGTTTTTATGGAAGTGAGGGATGCACAGTGTTGGTTGTGATTACCTACGACGTAAACACGGAAGACGCCGCTGGTCGCCGCCGTCTGCGGCAAATTGCAAAACAGTGCGTCAACTACGGGCAGCGCGTCCAAAATTCCGTTTTTGAGTGCCTGCTTGACGCGGGCCAGTGTCGACTTTTGCAGGCAAAGCTTTGTGAAATCATGGATACCCAACGAGACAGCCTGCGTTTTTATTACCTTGGAAAGCAATACGAAACCAAAATCGAACACTTTGGAAAAGATGGCTCCTATGCTCCCGAAGGCCCGCTGATCGTTTGATTGCGAACCGCCAGCACACAGAAAAACATGGCTTCTTTCGCACTGCATTTTTCGGTGATTCTGAAAACTTAACAAGCCCATTTTTTCGTTTTTACCCAAATTTAATGAATTAAAATAATAGCGCTGTGCAAATTGGATAAAATCCAGACGGAGTTTTATCTAATTTTGCT # Right flank : TTGGTATTATGGAGAAAGCACTGCATTCAAGCCTGTTCCGGTACAAACTCATACATGGCGTGATGGCTTTGCAGATCAAAAATCGGCTCTTTTTGATCCCACAGACGAACACGAATGCAGGCATTGCTGCTCTCTCGAATAATACCGGACATTCTGCCTTGTATCGGCGAGCGAAGGGGGTGGCCGCTGTGAGCGGGCTTTATTTCGATTTCGAGTAAGAGTTTTCCCTGTGAAAGTTTAATATAATTTTCTCGGGATGCAAGGATTTGAACACCGCGATAAGTGGCCAGACGATATTCATGTCCTTCGTGGATGATTGCGCAAATGCAGCCGGTGAAACTTGTGCCGCACAGCGGAATGTGGGCGATGGAAACCATCAAAGAGCAGGTGGCAGGGAAGTCGTTGCATTGCAGCCACTGATAGGAACGGGGAAACGACGTTCCTTTATCGGTTTCGAGATAGCCACGACCACCGTCAAAGCTGTGCAGATGATTGTCCAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCGCACGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCATCCCGCATGGGATGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.60,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //