Array 1 18756-17335 **** Predicted by CRISPRDetect 2.4 *** >NZ_CUFQ01000030.1 Staphylococcus haemolyticus strain W_75, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 18755 33 100.0 34 ................................. GACTAATTCCAACTTAACAACCAATCCAAATCAT 18688 33 100.0 32 ................................. GACACAAGCAGAAAGTGTTTGTTAAAGGCTCA 18623 33 100.0 33 ................................. GACATGATTTCAAAGAGGAGAACTTACAAGATT 18557 33 100.0 33 ................................. GACTCAACACCGCCTTATTGTTTAGCAGCGATA 18491 33 100.0 35 ................................. GACTGACTTTAGCGAAGAACTACAACCTAGTGGCA 18423 33 100.0 33 ................................. GACAAGAAAATAAAGATACTGTAAGTGCTGAGG 18357 33 100.0 33 ................................. GACCTTACCGTAAATAGATTCTTTTTGTTCATC 18291 33 100.0 33 ................................. GACAATCACTACCCAAGTCAATGATATCTTCTT 18225 33 97.0 34 .......................A......... GACTAACGTTGTGATGAACTATTCCATATAGATG 18158 33 100.0 34 ................................. GACTATCATCTTTGCGTCGTGTATCACCAAACAT 18091 33 100.0 33 ................................. GACATACGTTCATCAACTAAAAATACACGGTCG 18025 33 100.0 33 ................................. GACATAATTTTTATTTTGTCTTTGTACATGTTT 17959 33 100.0 32 ................................. GACAAAGACCAAAATATGTATGGTGACGGATT 17894 33 100.0 33 ................................. GACTTAGTATTAGCAATTTTGCTTCGTTGTACA 17828 33 100.0 33 ................................. GACAGTGACACTGGACAACCAAGTAAACCTGCC 17762 33 100.0 32 ................................. GACAATGCTAGGTACAATTAATAATGCTCTTA 17697 33 100.0 33 ................................. GACTAGAGTAGGGTATTTATTTTATCCGAAGTG 17631 33 100.0 33 ................................. GACTAAATTCGCTAGTCCATAGTGAAATTAGAA 17565 33 100.0 34 ................................. GACAAAGACATATTAGATAGTAAAGGAATAAGGG 17498 33 100.0 32 ................................. GACAATTTTATATCCAAAATCATGGATAATCG 17433 33 100.0 33 ................................. TATCTTTTTTAGGTCGGCTTTTTATTTTGAATA 17367 33 97.0 0 .......................A......... | ========== ====== ====== ====== ================================= =================================== ================== 22 33 99.7 33 GTTTTAGTACTCTGTAATTTTAGGTATGAGGTA # Left flank : ATTATCAAGTAAAAGAAAAAGCATTTGTAATCTATTTATATCCAGAAGCTGGCCTAAGCATTAAAGAACAAATAAGATTTAGAAAAATACTAAATAACTTACCTGTTCCGGTCATTGTTTTAACCGAATCACCACGTTTTTTATCTGAAAGTATTAAAGGACTAAATTATTTTATTAATAATGTTCAAATGATCACAGAATCTTTTTTTGAAGATAGCTATTGGAATGCACCAATTAATGTAGAAAAAGAACAGATTGAAGAGAGGTTTGAATATTTATTTGTAAAATATTGTTCAGTTTTAGAAATAAAACCGATTATTTCTAACTATTTACTTGCGGATATCATTGTTTTTAATGATATTGATCTTTATATCCTTGTTTCATTTTTGAAACACTGTAATTTAGAGTATAAATTAGATATCGATAAAACAAAAATTTCATTAGCATTATCGTCATATCTATTTTCTTAATTATTTTGAGGATTTATAATGATGCTAGAG # Right flank : TATAGCAAAATCACTGATAGGGAGAAGCATATCATAAATGATGCGGTTTTTAATTATTACATTACACGGGTAGATAATATAATAGCTCTATTTGTAATGATAAATTTAATTACATACCTTAAAGTTATAATAGTCAATTTAAATTATTTAAACAATCAGTGAGTTACTATTACTAATGTGATAACAATAAATAAGTAATAATCAAAAATATTAGTAGATTAATTTTATTTACTATATTAATGTATAATTTTAGTGAAAATAAATATAAAAAACATTGCAAATTACATTATAATAAAAATAAATATAAAAAAGAAAGTGTTATATTGTAATGAAGATAAATATTTTAGGCTATAATATTTTTTCAAAAGGCGGTACATCAAGAAGTAATATTAATTTAATAAAATCATTATTAAGTATCGGAGTAGAGGTGCATTATTTTAATTATTTAGATTTTAATAAAAACGATATATTAAAGCTAATAATTCATGAAGAATTAAACA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATTTTAGGTATGAGGTA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGTACTCTGTAATTTTAGGTATGAGGTA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.10,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //