Array 1 162927-158647 **** Predicted by CRISPRDetect 2.4 *** >NZ_SJPK01000008.1 Rhodopirellula solitaria strain CA85 CA85_contig00008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 162926 36 100.0 35 .................................... GCTATCATTGATTCTGATGAGGTTGGTGCTTTAAC 162855 36 100.0 40 .................................... AATCCAACGTCGCTGGGACGGTGCCCGCACCGATCGGCCT 162779 36 100.0 36 .................................... TCGAGAGCGAGCGTGATCGTGTTGAACGTCTCGAAT 162707 36 100.0 38 .................................... CGCCTCGCTGTAGACGCTCAACGCCGTCCGAGCATCCT 162633 36 100.0 38 .................................... CATGATGGAGCAAGCCGCCGATGCGAAAATCAGCGACT 162559 36 100.0 36 .................................... GTTCCCGCCGATGGGCGTTTCCCGCCGAGGCGTCCC 162487 36 100.0 38 .................................... GTTGACATCTACCAGGATCGCACTGGCCAATCGCGAGA 162413 36 100.0 37 .................................... GCTGCTGTCTTGCTTGGCTGCAACGTTCATCGCGTCA 162340 36 100.0 35 .................................... GATTCCGCGTGAGGTGATGCTGTCGCGGCTGATCT 162269 36 100.0 35 .................................... GTGTGGGATGGATTCTTTTAATTCCACGCTCTGTG 162198 36 100.0 37 .................................... TGATTGTAGACACTTGTTTTTGGTGCCGAGCCGCCAC 162125 36 100.0 37 .................................... TTGCTTTACTGACATTTAAGTAAGCCCGTTCAACAGC 162052 36 100.0 37 .................................... TTTTCATACCCTCCTATAAGAGAAACAAAAAGTGTTC 161979 36 100.0 38 .................................... TAGCAATTTATCCTCATCTGTCTGATGGGATAATGCCA 161905 36 100.0 37 .................................... TCAGATATCGAGGTAGGATCAGGCGGTGTCACAATTG 161832 36 100.0 38 .................................... ATCGCTCTTTTCTGTCCACTCGCGACCATGCTCAATCC 161758 36 100.0 38 .................................... GAGCGTTTGGCCCGTTAATGGGTCGCACTTACGACGCC 161684 36 100.0 37 .................................... GCGTGATCGGCATGGAACAACGCGGTGCCATCACGCA 161611 36 100.0 36 .................................... CAGGTCGAATTGCCGAATGAAATCCACGGCGGCTTG 161539 36 100.0 38 .................................... AGCGGTTCGGGGCCTGCTTCAGTTTCCGCAATCTCCGT 161465 36 100.0 37 .................................... ATCGTTGAATTTCTCCAGAGGGGTTCTGAGTGAATCG 161392 36 100.0 38 .................................... TCTACAACGTGTTTGGTGGTTACTCGTCTTTTTATGTC 161318 36 100.0 35 .................................... GGTGAGTTCTTCGTAGGTGATGCCAAGTAGTTTGG 161247 36 100.0 37 .................................... CGAATCCTTGTCAGGCTTCAATTCCTCAGCCATCTTA 161174 36 100.0 36 .................................... CTACCACGAGGGATACGCTGCCGGAGAGGATGGCGA 161102 36 100.0 38 .................................... GCTTCCTGGACAGCATCGACGTATAGGAGCTTTTCTGT 161028 36 100.0 37 .................................... CGCGAATGACTCCGCGTGATTCATTTGATCCGCACTT 160955 36 100.0 37 .................................... CTACGCTGCCGCCTGGTCGATTGCGATCGATGGGACG 160882 36 100.0 35 .................................... GTGGAGGGGTCATCATTCATTCACCGTTGGGCAAG 160811 36 100.0 36 .................................... CCATGTTGCCGCCACTGGATGTATCGCCGCGAAACT 160739 36 100.0 38 .................................... TCAGCGATTACTTCGGCCGGTGTCGGTTCGGTCGTAAT 160665 36 100.0 37 .................................... GCTCGCCTCTTGCTGGGCTGCCATCTTCGCCAGCTCC 160592 36 100.0 39 .................................... CGTTCTACTTGGCCTCAACGTCGCCCAAATACTTCGGCA 160517 36 100.0 37 .................................... GATTTCGGTTTCGGTCGGTTTGTTGTCGCCCGCGGGC 160444 36 100.0 39 .................................... CAGATGACCCAGAAAGTACGACGACCACCGATGCAGGAT 160369 36 100.0 37 .................................... CGTTGAACTGATCGAGATCTTCTACTGTGTAGTTGCT 160296 36 100.0 39 .................................... AGCAGGCAAGCAAACAAAAGCTACTGGCTATCCTTGGCC 160221 36 100.0 37 .................................... CGACCCATCGACATAGACCTTGATCCCTGCCTCTGTC 160148 36 100.0 38 .................................... AGAATAAATTTCGTTGTGGCGATACATTGGCTCGCCGT 160074 36 100.0 38 .................................... AAGTGAACGGGAACCCGGCGGTCGTTGCGTTCGTCGGA 160000 36 100.0 38 .................................... AGTAGTTGCCTGTCCAGCTTCTAAACTTCTTGCTTCAC 159926 36 100.0 37 .................................... CGGCGGCATGTCGATGTCGTAAATCGTGTAATCGCCG 159853 36 100.0 37 .................................... TGGAGACGACGACTGGCAGGATGTCGATTTGGTGGCA 159780 36 100.0 36 .................................... TGTTCGGAGTGCCTTTCTTCCGTCCGCCGGTTTTTC 159708 36 100.0 39 .................................... TTAGTCCCTCCGGATCCCTTGCGGCCAACCCAGCATATA 159633 36 100.0 38 .................................... GACCACACGATTTATTATTGTTGAAATAAACCGTGATA 159559 36 100.0 37 .................................... GCCTTGGATTCCTTGCGGGCCAGTGTCTCCCGTTGCG 159486 36 100.0 35 .................................... AAGGCGTCGTGCGAGGTATCGAAATGGCCCGAGGT 159415 36 100.0 35 .................................... CGAATCGTCGCCGTAGACGCCCGCATGATCGAGAG 159344 36 100.0 40 .................................... CAGAGAGTCGGAGAATCATGACTTTCATCGGGACGACTCT 159268 36 100.0 37 .................................... GAGGAGCACGGCCGCCATCAACTTGATTCGATGGAGG 159195 36 100.0 36 .................................... CGGTGTGAGTTCAGCAATACGGGCGAAACAATCGTC 159123 36 100.0 36 .................................... AAGTGCCGTCTTGATTTGCTTGGACCTGTCATCGCG 159051 36 100.0 39 .................................... GCGACGATGAGCCAGGCGAACCGACAGGGCGGTGGCCTC 158976 36 100.0 38 .................................... AGCATCCCAGGCAGGAACCTGTCGCGGGGCAGCTCGAA 158902 36 94.4 37 .T..............T................... TCGCGGGATTCCATTACCCACTCGGGCCAGCCGTTCG 158829 36 94.4 40 ................T.....C............. CAATCATCATCGGACGATAGACACCCATCAGCCCCGGCAG 158753 36 97.2 36 ................T................... ACCTTCACGTCTCGTCCTCGGCCTTCCTTGCGTAGC 158681 35 97.2 0 .................................-.. | ========== ====== ====== ====== ==================================== ======================================== ================== 59 36 99.7 37 CCTTCCACGAGTTCCAACTCGTGGCCTCATTGAAGC # Left flank : CAGGTCAAACCCGGCAAACCAGCTCTGGCACTCGACCTGATGGAACCGTTCCGCCCCCTGATTGCTGACTCGGTCGTCCTGTCGGCGATCAACACCAAGATGGTCACACCGGCTCACTTCATCTGTGCGGGAAAATCGGTCGTGATGAGCGATGCCGGGCGCAAGCATTTTCTGCTAGCGTATGAGAAACGGATGGATTCACTGGTCACTCATCCGCTATTCGATTACCGAGTCAGTTACAGGCGTTTGCTCGAGATTCAAACTCGATTGTTAGCTCGCCGCCTCAGCGGAGAGATCGAGGATTTCCCGGTTTTTCAGACGCGGTAGTGACGCGAGCAGCGAGGTGGTGAGCAATTCCCGGCCACCGCTCGCAACCAGGAAAAACACCGTATTTACATCACCTCCAGGGAAACATCCACGTGAACAGAAACGCTCAACTGGTGGACCGCTCGCAAACCGCAGCAAAATCCCCCATAATCCCGCATCCAGAAATGGGTGCT # Right flank : TAACGTGCCACTCAATTCGGTCAAGAACCATCAGCGAAGGAAACGCGAAGGCGCCAGATATTTTTGATTGGTCAGAACATTCTTTGCGTCTCTGCGTCCTTGCGTCTCTGCGTCAAAAACTCGCCATGATCTACGAAGACCGACTCGAACCAATCACCGGTAGCTGACAGGTGGCCGCGGGGTCCATGTTGATCACCGGTGCTTCCGGTAGGATGTTTGGCGATTGGGTGGGTTCCTTTTTGTCGGGGTGATGGGTAGCTGATGGCTGAGTTTGTTGCGTTTTATATTCTTCCGGCGGTTTTCGTTTTGACGTACCTGCTCCAGCTTTGGAGTGGGTTTGCGGTGGCGGGGATCTCGGGGGATCAGGTGTTGGTCGATCGGCGGACGAGGCCGGGGCCGTATTGGTTCATCATGGCGATCCAAACCATGATCCTGGTCGTCGCTCCGATCTTGGTCGGGATGTGGGGCTGAGAGTCGCCGCGGGCGGTTCTGAGTGCCGC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTCCACGAGTTCCAACTCGTGGCCTCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.70,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //