Array 1 220146-218182 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPFY010000001.1 Bifidobacterium longum strain BSD2780061687b_171204_F1 NODE_1_length_286847_cov_69.4868, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 220145 36 100.0 28 .................................... GGAACGCCGGAAGGCTGTTCTAGCGGCC 220081 36 100.0 28 .................................... ATAGAGTCCAGCGGGTTGTATTCCATGT 220017 36 100.0 28 .................................... AAGCAGGCCATCGCTCGCGCCGACGAGG 219953 36 100.0 28 .................................... CTCAGGCATGATACTGTTTTATATGACT 219889 36 100.0 28 .................................... TCGTCTTCGGTGCCCACTCGCGTGCAGC 219825 36 100.0 29 .................................... ATTCATGACGCTTCGGGTGCTGTTGCCGT 219760 36 100.0 29 .................................... GTGAGCTTGTCCGTGTCTTTCATCAGTGG 219695 36 100.0 28 .................................... TGTTTACGCTCAAAAAGCACATTAGATT 219631 36 100.0 28 .................................... CCGAGGCCGGTAGGGTTGCGTGTCTGGT 219567 36 100.0 28 .................................... GTTGTAATCGGTCATAATAGTTTTCAAT 219503 36 100.0 28 .................................... TCTCCCAGTTGCTGCCCCTTGGCGTCGA 219439 36 100.0 28 .................................... CGTATTCATCGTGGCCTCTTCGCGGTTT 219375 36 100.0 28 .................................... CGTACATGATGGGGTCCTTGACCTTGTA 219311 36 100.0 28 .................................... TTGGTGGTGTTGGGCGTCCGGCGCAGAA 219247 36 100.0 28 .................................... ACAGTATTATTGTCCTGATATTCATGTC 219183 36 100.0 29 .................................... TCGTCGTCCATCTCTGTACCTCGGTTTCT 219118 36 100.0 28 .................................... TCCATGACCGCGTCCATCACCTCATGCC 219054 36 100.0 28 .................................... CGTTCCCCAGTGGGGTGAGTGTGATGCC 218990 36 100.0 29 .................................... ACCGATTGCAACGCGAATATCCCGGGTAT 218925 36 100.0 28 .................................... GTTGTTCCGGGAACAACTGGGAACAACT 218861 36 100.0 28 .................................... CTTGCCTCCGTTCTGCATCCAGCTGTCG 218797 36 100.0 29 .................................... ACGCGGCGAAGAATCTTGTTATCGCGGCT 218732 36 100.0 29 .................................... GTCGCACGTGGCATGGCATGTTGGCGAAC 218667 36 100.0 29 .................................... TGTTGAGGGGAACCGTATCAAACCTGATT 218602 36 100.0 28 .................................... TGGTTTCCGTGCCGCATTGGTCGCAGTA 218538 36 100.0 29 .................................... TCATGGGACTGTGAGCGGCGGCGGCGTGA 218473 36 100.0 28 .................................... TAGAAGTGCAGATTCCGTTCCTGCAAAC 218409 36 100.0 28 .................................... AGGACGTGCAACGCAAGTATTTCAAGAT 218345 36 100.0 28 .................................... TCGTCGATGTGTTCCAAGAGGTTTGGTG 218281 36 100.0 28 .................................... TATTGTTCGGGTGCGATGGTGATGATCA 218217 36 86.1 0 ..............................TTG.AT | ========== ====== ====== ====== ==================================== ============================= ================== 31 36 99.6 28 CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Left flank : ATTCAACGGTTCCGGTTTGACTATACCGAGCTCATTGAATGATTTTGCGCAGCAATTTGGTTTATATTGCGAAGGCAAAATCGACAGGTTGCAGGTTCCCGAATATGTAGGCGAGTCATGAAACGCGATGAGGACAGTGGCGGCATGTGGTGCTTGGTGATGTTTGATTTGCCGGTCAAGACAAAACGGCAACGGCATGCTGCAACTGTCTTTAGAAATATGTTGCTCGACATGGGATATGGAATGGTGCAGTATTCCGTATATGTGCGGTATACGCCTACGCAATCGGGTAATAGGGCGACGGTCAAAATGATTAAAGACAATCTGCCAGCTAATGGCTTAGTTAGAATTTTGCATATTAGCGATCATCAGTGGTCCACGGCGGCCCGATTTTCTTCTGGAAAACGTGAGATTGAGGAAGAAACGCCTGACTTTCTCACGCTTTTTTGAACGTAGGAGAGTCTGAAAAGATTGAAAAATAGCCCTTCTTGATAGGCTAT # Right flank : GCTGGAATGCTTGGGTTGATTTGGCTGATTTAGCTGTGATGGCCGCTGCGGGAATGGCCCTTGCGCGGTTGGCGGCAGAGGTTGCGGCGCGGATTGCGGCACTGATTGTTGTGCCAATTGCGTCTGCGGTGAAAAATATGGCGACGGCTGTGTCTGACTGTTTATCGGCGGATGTTCCGGCTCAGGTTGTGGCTGGAATGGAGAATATTGCGGTTGCGCCATTGTATGCCCCTGCCCCTTCATTGCCATTTCATTGGCGCATGGCGAGGGCTGAAAACCAAGATGATGAATCTTGCATGAGTTATCCGTGATTCCTGTGCGTTGGTACAGCGCGGAAGGTTGAGCAGCCGACATATGCAGGCTTGTCGGTTCACGCGAATATCGTGGAACACATGACTTCCAATACCCTTCGTATGTCAACCATGTTCCTGCGCACCCTGCGCGAGGACCCCGCTGATGCCGATGTCGATTCAGCCAAGCTGCTGCAGCGCGCCGGCTAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //