Array 1 826-16 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABT01000012.1 Acinetobacter baumannii MRSN 57 contig00012, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================== ================== 825 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 765 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 705 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 645 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 585 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 525 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 465 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 405 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 345 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 285 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 225 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 165 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 105 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 45 30 96.7 0 ............................C. | ========== ====== ====== ====== ============================== ============================== ================== 14 30 96.4 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TGCGAAAGCGGGGTTT # Questionable array : NO Score: 5.42 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.34, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [11.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 117245-114873 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABT01000011.1 Acinetobacter baumannii MRSN 57 contig00011, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 117244 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 117184 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 117124 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 117064 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 117004 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 116944 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 116884 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 116824 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 116764 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 116704 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 116644 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 116584 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 116524 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 116464 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 116404 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 116344 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 116284 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 116224 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 116164 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 116104 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 116044 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 115984 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 115924 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 115863 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 115803 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 115743 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 115683 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 115623 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 115563 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 115503 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 115443 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 115382 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 115322 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 115262 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 115202 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 115142 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 115082 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 115022 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 114962 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 114902 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 40 30 95.2 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : TTTATTGCCTGAAA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.32, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //