Array 1 42833-43898 **** Predicted by CRISPRDetect 2.4 *** >NZ_BACO01000014.1 Paucilactobacillus suebicus DSM 5007 = KCTC 3549, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================================================================================================================================================================================== ================== 42833 32 100.0 36 ................................ TGAAACAGGTAGTATGCGTAGATTACGAAATGAAAC 42901 32 100.0 34 ................................ ATCATCTGTAAGGCCAGCTAGTTATGGTGGTACT 42967 32 100.0 34 ................................ ATGATCGAACAAAACGCTCTTTCACCGATCTTAA 43033 32 100.0 34 ................................ ACAACAGGATAAATATAAAAAATGTTGTTCTTTA 43099 32 100.0 37 ................................ TTAATCACGGGTACTAGTGCCGACGCCATACGATCGT 43168 32 100.0 35 ................................ AACGCTACCATGTTGATGAATTTGAATTAGATGAA 43235 32 100.0 35 ................................ AAAACGAATTTCCAGAAGAAATGGCAAAACGTACC 43302 32 100.0 34 ................................ CATCTTGCCAGCCTTTTGTAGTGCTTTAATCAGA 43368 32 100.0 34 ................................ GGAACTGCCCAAATGAATTAAGTGAAGTCATGCC 43434 32 100.0 35 ................................ ATGTTTGGTGATGATTTGGCTAATGGGTCGAGTAA 43501 32 100.0 36 ................................ AAGGAAAAGCTAGAAGAGGCCACTAGGGCTAAGCAC 43569 32 100.0 36 ................................ CAAGAGGCATTTAGGCTTAAAAATGGTTTAGTTGGT 43637 32 75.0 198 ...A........A.........T..GATCT.. TATCTGAAAAAATAATGCCTGTAATTACCATTTTTTATCAATTGTAGTTTTTGCCGTCACCTTGAAACGATATATAAATTATCTCTACTAATGTGTAGACACGTTTTTATACTACAAGACAAGTAGAATAAATCTCGCTATCGTCTGTTTACTACGCAAAACGAAAATCTATTTTTATAAAATGTTATAATGATTGAA 43867 32 81.2 0 ......T....TTAA.A............... | ========== ====== ====== ====== ================================ ====================================================================================================================================================================================================== ================== 14 32 96.9 48 GTCGCACTCTTCGTGAGTGCGTGAATTGAAAT # Left flank : TGTGTATAAGTTTAGTGGTAGTATTAGGCCAAATTTAGCTGAAAAAACTCAATTTAGTTTGGAGGATTCGGAGCTTTTGAAACAGGCGTTATTACATATGTTTGACAATGACGCATCAGCTTCAAGACCTGCAGGATCTATGCAGTTATTAAAAGTAGTATGGTCTGTGCACGATAATAAATTAGGCCAGTATCCGCAGTGGAAAGTAGAACAACAGGTTTCTGTTGAATATAATGATACGGCTTCTGATTTTGAAAATGTTAAAATTAAGTTTAACGCATTACCAAATCTTAAAAATGAAGAATTTTAAAAAGTTTAGTAGCAATAATTTTCATCAGTGCGAAAGTGTTGTGCACATGAAATTGCACGTTAATTCGCACTTGATGGAATTAACATATTACTGCATATAGTATTATTGTATTAGCTTTCTTTACACGAATTATGTATATTTTGAATCTTAAAAACGGATTATATTACCTGAATTTGGGTATTTATCCGCA # Right flank : TTATAAGATCAAGGGTCCTATTTGAGCCTTTTACTCACATACTTATTTTATGAAAGCATGTGAGAATACATACTTTTCAAAAATGAATTGTTGGCAGTGTAACATAACGTATGCTTAACGGGGTGACTAGATTTGGAATATTTGGCACATAAGAATGATGATGGAAGTATACAAACACTTAGAGAACATTTACAACAGACAGCTAACTTGGCTTATAAACTAGCACCTGGCAATCTTAAAAATATCGCCTATTTGCTAGGACTGCTACATGATATTGGTAAGTATCAACCAGAATTTCAGTCTCACATTCAAAAACAGGATCATAACAAAGTTGACCACTCTTCTATGGCAAATGCGATTTTAATAAATTACTTTGAACAGGTAAATGATGATATGTCACGACTATGCATTGAAGCATTTGGTGGTATCATTATGGCTCATCATGTGGGATATTTACCAAACTTTGGTAACGAATTGCTTCAAGAAACAGATTATGAAAA # Questionable array : NO Score: 7.86 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:-1.24, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTTCGTGAGTGCGTGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTTCGTGAGTGCGTGGGTTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //