Array 1 103419-106729 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJFB01000004.1 Bifidobacterium moukalabense strain GB03 contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 103419 33 100.0 34 ................................. ATGCGCAATTTTAGTCAAAATGCATGTTGATGCC 103486 33 100.0 34 ................................. ATTGTCACTGACTATTTGACTGGCGTTGTTAAGG 103553 33 100.0 34 ................................. GTTTATTATTGAGAATGAATGTCCATAAATGTTC 103620 33 100.0 34 ................................. CATCCGAAAACTGCCGGTACGACTGCAAGCACCA 103687 33 100.0 35 ................................. CATGATAGTTTCCTTTTTGTCAGCCGTCCGCCGAC 103755 33 100.0 35 ................................. CTCCTTGACTGGATTGTTGAGGTTCGCGTATTTGG 103823 33 100.0 34 ................................. ATCGACGAATACCACAAGTATCTGAACCAACAGC 103890 33 100.0 33 ................................. CGGATCCACGCCATGGTTGAGCAGGTTGGCCAC 103956 33 100.0 33 ................................. GAAGGCAAGGCCGAGGACGATGGACTCATCACA 104022 33 100.0 33 ................................. ACCGAGGGTATGAACGCTCCATGGGTCACGCAA 104088 33 100.0 33 ................................. CAGCATGACATTCAACAGCGAGTTTCCACAGAC 104154 33 100.0 34 ................................. TGCGAGCCATTGGCTGCTTGCGTCGATGAGGTCG 104221 33 100.0 35 ................................. GATATGATACATACCTTGCGGACGACTCAAACCGG 104289 33 100.0 38 ................................. GCGCGGATCGGTGAAGATATTGAATTCCGCCACGGGAC 104360 33 100.0 34 ................................. GAGCTGGTCCCGAACGGACAGTATGCAGCATCGG 104427 33 100.0 34 ................................. ACTCTATGTGTCACTCTATGGTGGTGTACACCGC 104494 33 100.0 35 ................................. ACGATCCCACCCGGTTCGACCGAACTGGTGATCAG 104562 33 100.0 34 ................................. CACAGGCGAAGTCTACATGCTCACCTCCGTCTCC 104629 33 100.0 34 ................................. GGGAATGGTGTCGGCCCGGACAACGTGATAGCCT 104696 33 100.0 33 ................................. ATGGACTGCCCAGCCTCGCTAGACCATATCATC 104762 33 100.0 33 ................................. GACACCGGCTCGGCCAGCTACACCGGCAACCTG 104828 33 100.0 34 ................................. ATTGATACTACGCTGTATGGCACCACGTCCTAGC 104895 33 100.0 34 ................................. AATATGATACATACCTTGCGGACGACTCAAACCG 104962 33 100.0 34 ................................. ACCCACAATATATGCGGCACGAATGGAATTAAGC 105029 33 100.0 33 ................................. ATGCATTCCTCGACGGATTCGCGCAGTTCCTTG 105095 33 100.0 34 ................................. TTTGAAAGGAATGGCGGTTTACGGAGATCCGAAG 105162 33 100.0 34 ................................. CTGAAATTTCACCATTGATTTTCATGAGCGAATT 105229 33 100.0 33 ................................. AAGCGCATGACAAATACTATTATCGACGGTGAC 105295 33 100.0 34 ................................. GTCCATGCACAGTCTTTTTACATTGTCAAAAGTC 105362 33 100.0 34 ................................. GCCGGATAAGCAGAATTCCGGCGACAAGATCGAC 105429 33 100.0 33 ................................. ACGAACCAGCGGGGCAATCCGATACGCGAAACC 105495 33 100.0 34 ................................. AAGGTAAAAAGTATCCCAAAAACGCAATAAAATC 105562 33 100.0 33 ................................. GTTGATACAACGCTGTATGGCGCCACGTCCTAG 105628 33 100.0 34 ................................. ATAAATTTGCGTATGTGATTATCGTATTTATTGG 105695 33 100.0 34 ................................. CAATTCAGGCGGAATAGCCAAGCCAAGCTGTCGC 105762 33 100.0 35 ................................. TTGACCGTGACCGTGTAGACATAGGATTGATTCGC 105830 33 100.0 33 ................................. ATGCGCGTGGTCTGATCTGGGACCATTCCCGGC 105896 33 100.0 33 ................................. CGACACCAACCGACGCCGGCTGGTACCTGCCTG 105962 33 100.0 36 ................................. ACATGGCACGAGACGTGCAGGTGTTCATCCGCAACG 106031 33 100.0 34 ................................. TCCTCCCGGCCGGCCCTGCCGGGGCCCGCGATGG 106098 33 100.0 34 ................................. ATCGAACCATCCGACTGGTCCGACCAGGGAGACA 106165 33 100.0 34 ................................. AAGGGCACGTGTACACGGCCCCGCAGATGATCGC 106232 33 100.0 33 ................................. TACAGCGACGGATCCAACCTCAAAGGCTACCTG 106298 33 100.0 34 ................................. CTCTTGAATGATCTGCTACCGCTCGGCCCTGACG 106365 33 100.0 33 ................................. GTAGGCGTGTTTGTGTGGTTTGCAGTAGCGTTG 106431 33 100.0 34 ................................. TAATGAGCAATCCCCCGAAACAGAAGGGCACGAA 106498 33 100.0 33 ................................. GTATCGGACTGCGGAACGCCGAAAACTTCCTGA 106564 33 100.0 33 ................................. GAATGCCAACGCGACGAACTCACCACGAGTGAC 106630 33 100.0 34 ................................. CAACACGTATGCGACCAAAACCGATGTCAGCAAG 106697 33 81.8 0 ..................T.T.GA...CT.... | ========== ====== ====== ====== ================================= ====================================== ================== 50 33 99.6 34 GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT # Left flank : CTGCGGGAAAGAGACGATTGCGTAACGTTGCGAAGACTTGTATGAAGTACGGGCAGCGAGTGCAGAATAGTGTGTTCGAGTGCTCGGTCACTCCAGCAGATTATCTAACTCTAATAAATGAAGTGATGAAAATCATGGATCAAGAGAAGGATAGCCTACGCTTATATAAATTAGGAACGAAATATTCTGAGAAGATTGAATATTATGGTGTGCAACGGCATCTTCCTGTGGACGATGTAATGATGATCTAGGCACCGAAGTCCGCCGTTGTGCGAAGTGGAAGCTCTCATCGGATAAGGCGAGCTTCGCACTTGGATAGAACTTGGAATCGAAAAGTAAGTCGACTTTCCTTTGCTGTTTGATAATTTCAGAGAGAAGAATCGTTATTATTTTTTGGTCGAGTGATTAGAATAACAGGTTTTGACCTCAAACCCTGCTACTCTTGGACTCGTACGAAGGATAGATGTTCCACAATGTGAAACATGCTGTCCATCTGTGCA # Right flank : TGACGGGGGCGGTCATGGGATTGCGTGAGCAGCGTGAACGATGCGGGTTGACGTTGTTCCAGTTGGATGCGTTGACCGGTATCGCCTATACGCGGCTGAGTACGTTGGAGTGTAATCCGTCTGAGGCGCGGAACATGTATTTGTGTACGGCTCGGCGGATTGCCGACGTGTTGCATTGCAACGTGTTGGACTTGTATCCGGATGAGGATGCTTGGCGTGGTGGCGTGTCGGCTGGCGTGACCGGGTTGAGGAGGATTCGTAGGGAACGGCATTTGACGCAACGGATGCTGTCGTCTTTGACGGGTATTCCTCAGCCTAATATTTCTTGGTTTGAGACTGGGTATCGTCCCGTGTCTCAGATGTATTTGGATACTGCGCGTCGCCTGTCGGAGGCGTTGCAGTGTGACCCTGTTGATTTTCTAATTGATTGAAAGGATTTTGTGATGAAGGCTGAGGTTGTTATTGTTTCGCGGTTGGCGCGTCATGGCGGGACGATGCTG # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.30,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //