Array 1 191471-198169 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIJW010000002.1 Actinomyces sp. ZJ751 Scaffold2_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 191471 29 100.0 32 ............................. ACGGCCCACTCGCGCGAGTACGGCTTCCAGTC 191532 29 96.6 32 ............................G CCGCACTTTGTTGTCAGACAGTATAGGATACT 191593 29 96.6 32 ............................G ACTCACGGGGTTAAACTGCGAGGTATTCTCAA 191654 29 100.0 32 ............................. CAGGCACCCGGCCGTCCGCAGAGACCTGAGCG 191715 29 96.6 32 ............................G CGCGAGCCACCCGGGCACCCCCTGACGACGGA 191776 29 100.0 32 ............................. CGCTCGTCTGTCCCCGCTGGCGAGCGGGTCGC 191837 29 100.0 32 ............................. ATAGTGAGCGGATGCGCCATGATTGGTGGGGG 191898 29 96.6 32 ............................G GTTGTCGAGGGCTCCCACTCCGACGAGCAGGG 191959 29 100.0 32 ............................. CGATGTTGGCCATCGTCCGGGGGAAATTGTTG 192020 29 100.0 32 ............................. GCGCACAGCGATGTGGTGGTGCGCGCGTCCGG 192081 29 100.0 32 ............................. TTGGCGTGCACCCTCGTGGTGCGGATCGCTTC 192142 29 100.0 32 ............................. CCTGGACCCGGGTGAGCCAGCGACCGCCGTCG 192203 29 96.6 32 ............................G CCTCTAGCGCACCCACTCTGTTGGACAGGCTG 192264 29 100.0 32 ............................. GCCTGGCCGATCTGCTCGGCCAGGCGCTTGCC 192325 29 100.0 32 ............................. CGGAACGGGCTCATCCCGGGCGCCGTCGACGG 192386 29 96.6 32 ............................G CCCCTCAGGCGGGAGACGTTGTCGGCGGCGGT 192447 29 96.6 32 ............................G CGGGCGCGGGCCTCGTGGCGGCCGGACGGGGT 192508 29 100.0 32 ............................. TCACCTAGCGCCACCTCCCAGCGGCGCCCGTT 192569 29 100.0 32 ............................. GCCTTGACGGCGTCACGGCCCATCTGCTCCAC 192630 29 96.6 32 ............................G ACGAGGGCGATGCGGTCGTGGGCGGCGGCCGG 192691 29 96.6 32 ............................G CCCCTTCGCGGTCGCCACCAGCGCGTCCGTGG 192752 29 100.0 32 ............................. GACGGTGACGACGGCCAGACCCACCTGACCGT 192813 29 96.6 32 ............................G GTCGTCGAGGGCTCCCACTCCGACGAGCAGGG 192874 29 100.0 32 ............................. GCGCTTCGCCATCTCGTGGACGTGCCAGTTCT 192935 29 100.0 32 ............................. TACCTGTGCTCCCCCACCAACCATGGCGCGTC 192996 29 100.0 32 ............................. CACCCCTCCTCGGTGAACAGGGCCGTGTAGTC 193057 29 100.0 32 ............................. CAGGTGAGAGGGTTCAAGAACCTGGACAGGAT 193118 29 100.0 32 ............................. GAGGACGGCAAGGCCGACGCCACGAACGACAC 193179 29 100.0 32 ............................. ACCGACAGCTCAAGGGCGAAGGACGTCGCGTC 193240 29 96.6 30 ............................G GATAGAGAGGGTCTTCTTCCCCGCGCCACT 193299 29 96.6 32 ............................G GGCGTCCTCGTGCCGGTACGCCTCCCTCAGGA 193360 29 96.6 32 ............................G ACCCTGAGGAGAGTCCCTCAAGATACACAAAG 193421 29 96.6 32 ............................G TACAACTCAAGTATTTTTCTGTCAGTCACGGC 193482 29 96.6 32 ............................T GGTTCAGGAAGCACGGCGGGAGGATGAGGACC 193543 29 100.0 32 ............................. CTGGTCTCAGCCACGGGTGAAATACACGTACG 193604 29 100.0 32 ............................. GTGGTGTCAATGAAGTACCGGTCCGCCGGGTT 193665 29 96.6 32 ............................G CCCAGGTGCTCGTCATCGAGCACCTGGGCACC 193726 29 100.0 32 ............................. AACCGCCTGACACCGCCGCTGGGGCAGATCTT 193787 29 96.6 32 ............................T GTAGATGTGCGTGGGGCTCCCCGCGGGCCGCC 193848 29 96.6 32 ............................G TACCTGACGGTCCTGTAGACACGCTCAATCTT 193909 29 100.0 33 ............................. GCATCCCGCCGGGAAAGTCCTCGTCGACGCCGA 193971 29 96.6 32 ............................G AGCAAGATGGCCGGGCTGAGCCCAGCCCTCAT 194032 29 100.0 32 ............................. CCGAAGCTGCGGGTCCTGCGCGTCCAGGACGG 194093 29 100.0 32 ............................. CGGGCGCGGGCTTTCCGCGTCTCGGCGCCGAC 194154 29 100.0 32 ............................. CCGGCCGTGAGCCCAGGCAGCCGGGCGGCGAG 194215 29 96.6 32 ............................G ACTCGATCTCCCCCGTGACGCGCTGGAACGCC 194276 29 100.0 32 ............................. GCCTGGAGCCGGGTCACGAACTTCGTCAGCGG 194337 29 96.6 32 ............................G CGCACCACCGAGCGCCCCAGGCGCTGCCCGCC 194398 29 100.0 32 ............................. TAGGTCACTCAGGGTCGAGCGCCCCGGGAGTG 194459 29 96.6 33 ............................G GAGGAACCCCATGAGCGAGCTGATCAAGGTCGA 194521 29 100.0 32 ............................. AGGGGGCCAGTCCCCGCGCTCACGGGGACTGG 194582 29 96.6 32 ............................G GCCTCCCCGAAGGTGCGCGCACGGTGCTCGAC 194643 29 96.6 32 ............................G ATCACGAAGGCCTTCACTCCCACCACCGTCCC 194704 29 100.0 32 ............................. CATACGGCGATGATGTCCTACAACGGGTACCT 194765 29 96.6 32 ............................T GTCGTGATCAACAGGATTATGACGAACCCACA 194826 29 96.6 32 ............................G GTTCTCGAGGTGGCGCTTCCAGCGGATACGGT 194887 29 96.6 32 ............................A GTCTGACATCAGGTACAACTCGGAAGGTTTGA 194948 29 100.0 32 ............................. TGCACGGGCGCGACCGTCTGCGCCGTGTGAGA 195009 29 96.6 32 ............................G GTTCTCGAGGTGGCGCTTCCAGCGGATACGGT 195070 29 96.6 32 ............................A GTCTGACATCAGGTACAACTCGGAAGGTTTGA 195131 29 100.0 32 ............................. TGCACGGGCGCGACCGTCTGCGCCGTGTGAGA 195192 29 96.6 32 ............................G GTTCTCGAGGTGGCGCTTCCAGCGGATACGGT 195253 29 96.6 32 ............................A GTCTGACATCAGGTACAACTCGGAAGGTTTGA 195314 29 100.0 32 ............................. TGCACGGGCGCGACCGTCTGCGCCGTGTGAGA 195375 29 96.6 32 ............................G GCGCTGACCGAGGCGGCGAAGGCTGCCGCGCG 195436 29 96.6 32 ............................G GGGCCCGAGTCCTACGACAGGCGGCTCCTCGT 195497 29 100.0 32 ............................. GCTACGATCTTGCGCTCCGGCACGGGCGCACA 195558 29 96.6 33 ............................G AGTCGGTTCGCCCCGACGTCGATGCCGTTCTGG 195620 29 100.0 32 ............................. GACCCTGAGCGGGCCGACGAGATCGCCATGGT 195681 29 100.0 32 ............................. CCTCTCGCTGGCCACCTCGACGGCCCGCTCGA 195742 29 96.6 32 ............................G GAGCGGCGTTTGCTCGCCCCGGCTGAGGGGGT 195803 29 96.6 32 ............................G ATCTCGCGCTGGAGCTCGCTCATCGCGGCGAT 195864 29 100.0 32 ............................. TCGTAGACGTCCAGGGCGCGCAGCTCGTTGGC 195925 29 96.6 32 ............................G GTGGGCACGGTGGCTCCTCAGGGGGTGGTGTC 195986 29 100.0 32 ............................. GCGGCAGCGACCCACCTGGGCACGCCGAGCTC 196047 29 96.6 32 ............................G TACGCCTGCCCCTTGCCCGTCACCTTCGGGGT 196108 29 100.0 32 ............................. AGAGAGGAGGAGTAGACATGTTCACTGCCACG 196169 29 96.6 33 ............................G AGTGTCCCCGCCCCACGCCTTCTGCGCGTCGGA 196231 29 100.0 32 ............................. CGAGCACGGGCTTTCCGCGCCTCGGCGCCGAC 196292 29 96.6 32 ............................T GGTCATCGTCGCGGTGGTGCTGTCCACCTCAC 196353 29 100.0 32 ............................. GGCTGAACGCGCTCAGCGCGCGAGCGGACAAG 196414 29 96.6 32 ............................G AACGTCCAGGTCGACGCGCATGGGTGCGCCGA 196475 29 96.6 33 ............................G CGCTCGACCTCGCGGTCGTTGGCTGCGGCTGGG 196537 29 96.6 32 ............................T GAGCGCCCGAACCAGCGGTAGTCGACGGGTAG 196598 29 96.6 32 ............................G GACAGGACCGTCAGCCTGCCCGCCCTGGTCGG 196659 29 100.0 32 ............................. GGTGATCTCGCGGTCGTGCAGGTTGTCCAGGC 196720 29 96.6 32 ............................G ACCCCAGCGTCCGCGGTGACGACGCGCGACCA 196781 29 96.6 32 ............................T TGGAAACCCCCGTCGGCGACCTGGGCGCGGAT 196842 29 96.6 32 ............................G TCCAAGACGTCGCCGGGGGTGACCTCTAGAAG 196903 29 96.6 32 ............................T GAGGTCGAGGTCGGTGAGGTGAACGGTCTCGT 196964 28 93.1 32 ...-........................G CCGCTCGGCGCCGTCTCCACGCGGGCGGAGAC 197024 29 100.0 32 ............................. GTCATCCGGCCTAACCTGTCCGCCCTGTGGGC 197085 29 96.6 35 ............................T CGCGGACGCGTGGCCGGCCCGCCTGCGTGAGGGTG 197149 29 86.2 32 CCC.........................G GCCAACACCGCCGCCTTCTCCTTCACGCTGGT 197210 29 100.0 32 ............................. TGTCCGGGGCGTGGTCCGTCCCTGTCACGGCC 197271 29 100.0 32 ............................. TCGTAGACGTCCAGGGCGCGCAGTTCGTTGGC 197332 29 96.6 32 ............................G AACACGTCAGTGTCCGTCCCCACACACGCCGC 197393 29 96.6 32 ............................G GCGGAGTCCTGGGCGCCGTAGGCCGGACGCAC 197454 29 96.6 32 ............................G GTGACGAGGTCGCCCGCACGGTAGGGCACGCC 197515 29 100.0 32 ............................. TACTCCTGGGCGGGCTCCCGCGGCCTCGCTGT 197576 29 96.6 32 ............................G CCGCCACAGGCCTACGCGCATCACGCCCCCAC 197637 29 96.6 35 ............................T GCTCTCGCGCGACCACCCCCGCGCCTCACGCTGTG 197701 29 86.2 32 CCC.........................G CAGGGCCGCTTCCTCGGCTCCGGACTTTTCGG 197762 29 100.0 38 ............................. CACACGTCGCCTTGGCGGATGTTACGCATGAGGGTGCC 197829 29 89.7 32 CCC.......................... CGTCAGACGTCTCGCGCGCGGTCTCGGCCTCG 197890 29 100.0 35 ............................. CGTCAGACGTCTCGCGCGCGGTCTCGGCCTCGGTG 197954 29 89.7 32 CCC.......................... GAGCGCACCGAGGTCGGACGTCAGGACAAGGC 198015 29 96.6 32 ............................G CCATGCGGTAGCCGAGGATGGTGGCCACGTCG 198076 28 96.6 37 ...-......................... CTTTGATAGTCATGCTGGCCCCTCTCCTTCATGTGCC 198141 29 89.7 0 CCC.......................... | ========== ====== ====== ====== ============================= ====================================== ================== 110 29 97.7 32 GTGCCCCCCGCGTGAGCGGGGATGATCCC # Left flank : CCAGAGGCGGGCCGTCGCCGGTGGAGCGAACTACGCCGAGGAGGCGGGCGCATGGTAGTGCTCGTCCTCTCGGCCGCTCCTGCATCATTGCGCGGTGCGCTCACACGGTGGCTCATGGAGGTGTCCCCAGGGGTGTTCGTCGGTCACCTGTCCGCCCGGGTACGCGAGCAGCTATGGGAGCTCGTACGCGCATACATCGGGGACGGGCGCGCCCTGCTCATCTGGTCCACCCGTTCAGAGCAGCACTTCTCGGTGGCTTCGCTCGGTCATGATCGCGAGCCCGTTGATGTCGAGGGATGCCTTGTCATGCGGACGCCTTACCGCCAGATCGAAGGATCCACGGCGGTGCCCGGAGCGGTCAAAGCGCCTCGGGAGTCCTGGTCAATCGCGGCGCGCCGACGGCGCTATCGCAATTCTGCGGAGCGTGCGCTAGGTTCGCAGTGAAGGTGGATGGCCTCCCGCAGGTCACACCATCATTGGGATCTCAACGCTCTCTAAGC # Right flank : CGCCGCCCTCATCGGCGACAGCCGGCGGCTGCGGTGCCCCGTTACCTTGTTGGTGGTCGCCGGTGATGGGATACCGGTGGCTGGGCCAGCGGTGGTCGGCATGATGTCTTGCCCCTGTCTCACCGAATGATCCGGGGGGTGAGAGTCACCGGTCGTCGTGCGGCGTGCTGGTGGCCGCTGATCGGGGGAAGGGCCTGCCACTGGTGAGGTCTTGCGCAGGCGTGGGTGCGGGGCTGGTCGCCGAGAGCTGGCCCCGTAGACACCACGCAAGGGAGCCTGTCATGCAGGTTGATGACATCGGCGTCTTCGTCGGTACCGACGTCGGCAAGTGCGAGCACTGGGCCACGGCCCTGACCACGGACGGGAAGAGGCTCTTTGACAAGGCTCTGCCCAACGACGAGGCCAGGCTCCGCGCTCTGTACGAGACGCTGGCCTGTCACGGCCGGCTCCTGGTGGTGGTTGACCAGGTGCGCCACCACCAGGCGCCCTGGCACTCGCCC # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCCCCCCGCGTGAGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //