Array 1 17454-17308 **** Predicted by CRISPRDetect 2.4 *** >NZ_VORO01000009.1 Subsaximicrobium wynnwilliamsii strain 2-80-2 NODE_9_length_169685_cov_116.877, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ========================================== ================== 17453 24 100.0 42 ........................ TTCCCTACTACCAACCACCTACTACCCACTACCAACTACCAA 17387 24 95.8 32 ....C................... TTCCCTACTACCCACTACCTAACAACTAATCC 17331 24 95.8 0 ...................A.... | ========== ====== ====== ====== ======================== ========================================== ================== 3 24 97.2 38 CTAATCCCTAATCCCAAATGCCTA # Left flank : ATTCGATATTTATTTTTTTTACTTCAATTTCAGTTACAATTTCCAATGCTGAGACTGTGACTGAGACTGATTTCGCTGTTGGCAGTTGTCTGTTCTCTTTTCTCTGTTCTCTGTTCTCTGTTGTCTGTTCTCTGTTGTCTGGCCCCTAAATCCCCAAAGGGGACCTAATTTCGTTTTGCCTTTTGATTATTGCTTAAATTTAAACTTCGTTATTCGGTGTTCAAAATTCGTTATTCGATATTTCTTTTTTGTTGCCTGTTCATTGGCCCCTAAATCCCCCAAGGGGACTTTTGTTTTTAAATGCAATTAAAAGTATTGCAACCATTTACCTTTTTGGTACAATCAAATGCCTTTAAAAAGAGGGACTTTTGATTCAAGTGTAAATTAAATTGATCTTTAAAACCATACTTCGATATGCCCGCAAATTCCCGAAAGGGACTTTTACGCTCGTTGAAATTGTTATACTCAAAAATAGTAAATTTCCTACTACCCACTATCAA # Right flank : GCAGCTACAAATCCGCAATAACACTCAAAATCCGTTTTGTCGCCTTGCCATCCCAAAGTTCCGGTACTTTGCCTTTTTTGTAATTACCATTTAAAATGGAATCGATGTGGGCTACTATTTTGTCTTTGTCGAGATTGAGCAGGGTGTTCGAGCCGATAGTGACGGTGCTGGGGCGTTCGGTATTGGGTCTTAGAGTGAGACAGGGTTTTTGTTTGAAGGTGGTTTCTTCCTGAATGCCGCCGCTATCGGTCAGCACCAAACTGCAATTGTGAATCAAGCTTTGGAAGCTGAAATAATCCAAGGCCTCCACAATGATCAACTGCTCCAACTGGTCAAAGCGTTCGGTCAATCCGAATTTAGCGATGTGCTTCCGTGTTCTGGGATGCATGGGGAACACAATTTTTTGCTCGCTTGGAAGATTCTCTAGTAAATCTGCCAAGGTTTTTAGTCCGTCTTCGTGATCGACGGTCGCTGGCCTGTGAATGGTCACGAGGATGAAT # Questionable array : NO Score: 2.53 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTAATCCCTAATCCCAAATGCCTA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 1 231716-227074 **** Predicted by CRISPRDetect 2.4 *** >NZ_VORO01000002.1 Subsaximicrobium wynnwilliamsii strain 2-80-2 NODE_2_length_354157_cov_119.165, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 231715 36 100.0 29 .................................... ATTTGGTATTTCAAACCATCTTGCCTGTT 231650 36 100.0 30 .................................... CAGCGTCTGAACAATCAAGCACAAATTGTG 231584 36 100.0 30 .................................... AATCTTTTGTGCGCCCAAATGCAATCAATG 231518 36 100.0 30 .................................... GATGCCCATGTTTAAATAATTCTCTGGCAA 231452 36 100.0 29 .................................... TCTGCACGCTCAATGTCCACATCTCCTGT 231387 36 100.0 30 .................................... AAACTAAGATCTGTTAATGGCGGTATAACA 231321 36 100.0 30 .................................... CAGCATTGTCGATTGAATAAAGTCCACCAC 231255 36 100.0 30 .................................... CACAAATAGAGTAATGACCTCTGCTGATGG 231189 36 100.0 30 .................................... CGTGTTAAACGAACAGCCTACTTTAGACTA 231123 36 100.0 29 .................................... CTTTATTTTAGTCCAATCGGCATAGAGGT 231058 36 100.0 30 .................................... ATCGCAATCTATGAGTGCGGCAAAATAGGG 230992 36 100.0 30 .................................... TTCCTAAATGCAACACCAGGCGATCGCGTT 230926 36 100.0 29 .................................... GAGTATATGAGATAGATGGTGTGATGTAT 230861 36 100.0 30 .................................... TTGGGTTATTTCTGATTGAGGATCGTTTTT 230795 36 100.0 30 .................................... CATTGTAGCTGTTTTGATTGCGGTACTATA 230729 36 100.0 30 .................................... CAAAAAAAATTTATCTCGAGGAGTTTTTAG 230663 36 100.0 29 .................................... TTCGTGTAAGCGATCACTAACATGGTAAG 230598 36 100.0 30 .................................... TTTGTGCCTTGAAACGCTTGGACGCATTCC 230532 36 100.0 30 .................................... CAACCACTAAATGGGAATATTGTAAGGGTG 230466 36 100.0 30 .................................... ATAGAAGAAATTATTGAATCTTACCTAGCG 230400 36 100.0 30 .................................... AATATCTGAACCGCTAATTTTAGTACTGGC 230334 36 100.0 30 .................................... CCATTAGAAACCACAAAGAAACATTTTAGG 230268 36 100.0 30 .................................... TTGGGTTATTTCTGATTGAGGATCGTTTTT 230202 36 100.0 30 .................................... TATTGTTTTAATTTAAATTTGTTGTTCTTA 230136 36 100.0 30 .................................... AAAACCCTTTATTTCAATGAGCTGTTTTGT 230070 36 100.0 30 .................................... TTTGGCATCTGATTAAACCTTTTAAGAGAT 230004 36 100.0 30 .................................... GTGCGACCATCGTGGTATCGGCTATTATTT 229938 36 100.0 30 .................................... AGAATAAATCCGAATAAGTTCAGGGATGAT 229872 36 100.0 30 .................................... AAGAAGATACTGCGACAGGGGATTTATTAG 229806 36 100.0 30 .................................... GCCCATCAAGGATCCTGAGCCATACGAAGC 229740 36 100.0 30 .................................... AAAATTGGTTTTCTGGTGGCGCTGGTGCGT 229674 36 100.0 30 .................................... ATTACGGAAGGCAAAGTGTTTAAGGAAATA 229608 36 100.0 30 .................................... TTTTATTCCAAAGACCCTGCACGCAAATTG 229542 36 100.0 30 .................................... CTCGGTCTTTAAATCGTCTTCGGTTATGTA 229476 36 100.0 30 .................................... TTGTAACTGTAGCAATTCACACGACACAGT 229410 36 100.0 30 .................................... CACTACCATATAGCGACTGATACGTACCTA 229344 36 100.0 30 .................................... AGTATTTGGTTGGGCATGGCCACTCTTGTG 229278 36 100.0 30 .................................... TGGCAATGCATCTAAAGACAATCGCACCAG 229212 36 100.0 30 .................................... AGCTAGAAATGCATTAATAGCACGAGGTTG 229146 36 100.0 30 .................................... CAATACCCAGGACACCGGCAGCTGTTGACG 229080 36 100.0 29 .................................... TCCTTAAAAAACTCGGTCGCAGTTTCTGC 229015 36 100.0 30 .................................... TCTCAAGCCGGTTGCATCCAAGCATTCTGC 228949 36 100.0 30 .................................... AATCCCCTACGAATTTCAATTAGTGATGGG 228883 36 100.0 30 .................................... ATTAGCCTTTTCTTGATTTAAAAAAGCCCA 228817 36 100.0 29 .................................... GAACGCTGAAGCGTAAAATGTCATGGTTG 228752 36 100.0 30 .................................... GGAACCGAAATACTAGCCTTCAAGTCCCAG 228686 36 100.0 29 .................................... TACAGGAGCGCCATCCCGATTGGAAGGTG 228621 36 100.0 29 .................................... CTAAAGCTGTTTTAACGGCATTATAATGT 228556 36 100.0 30 .................................... CTGGTTTTTCACAAACTTGGAGAGGATGCG 228490 36 100.0 30 .................................... TCTGGATTAATTAACTAATATCTACCTACG 228424 36 100.0 30 .................................... CGCAAGATGTTTTATTCTTACGGCAATGGG 228358 36 100.0 30 .................................... TTCCTAAATGCAACACCAGGCGACCGCGTT 228292 36 100.0 29 .................................... TCCTAAATGCAACACCAGGCGACCGAGTT 228227 36 100.0 30 .................................... CGGCAATAAAATACATCGGCTCGATCTTCA 228161 36 100.0 30 .................................... TGCTTTTAAAAAACCTATTACGATGAATAC 228095 36 100.0 30 .................................... CATAAGACGTTTATAACTAGGCGTTTTTAG 228029 36 100.0 30 .................................... ATAATATATATTTATGATGATATTATATAG 227963 36 100.0 30 .................................... CACTACCACATAGCGACTGATACGTATTTA 227897 36 100.0 30 .................................... TATAGTAGTAATAGTATATTCATTAGTACC 227831 36 100.0 29 .................................... AAATGGTACAATTTAATAATAGCACTATA 227766 36 100.0 30 .................................... AAGCTCCCGGTCACAACGTTATTAGCGTTA 227700 36 100.0 29 .................................... ATCTCGGCATACTCAAACTCTGGGAATAC 227635 36 100.0 30 .................................... CTTGAGACTGCCATTTTATAGCTTTGACAA 227569 36 100.0 30 .................................... TCACATCGTAATCTCCATTTAATGTTGCTG 227503 36 100.0 29 .................................... TCATCTACGTGGTCATTGATGCTTATAAC 227438 36 100.0 30 .................................... ATTATACCGCATTTGCGCTAATAGCACCCA 227372 36 100.0 30 .................................... AGAACCGTGGTTCTAACCTTTCAATCCCAG 227306 36 100.0 30 .................................... AGGGATCTCATCGGATTGTTTGAATATTGC 227240 36 100.0 30 .................................... AAATACGTACAAAGCACACTACTTTGATGC 227174 36 100.0 29 .................................... AGCAACGGATGATCGCGGCCAAGCCCGGC 227109 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 71 36 100.0 30 GTTGTGGTTTGATTAAAGATTAGAAGACACGATATT # Left flank : CACAAATTAAAGATACAAATTCCAACGTTTTTAGAAGAATTCAAAGTTTTGGTAAAGGTAAGACCGGATGGCTGACGTTTAATCCAATCAAAGTCAAAGTTTCTGTTTCAGGAAAAATAGTAAAAATTTAATAAGACTAAAATGAAAAGTGTGATTTTACATCAAATAAATTTTTTGAGTCATGACGCGGCAAAGCTTTTCCTTAACCAAACAAAATGACGAATGGTAAAAAATAAAATAGCAGATGACGAGTTCAAATGCAAAAGTGAGGCCATCAATTATCTCATTAAATAAGCACGAAAGCAAATAGTGTATTATGATTTTGTGCGAATGAAAATAGCGAGCAAAACGGTTTTGCTAAAAAACAATCCCGGGAAGTAATGTTAGATGAATTCAAACAAGATTTCCATATGAGGAAAGTTCTTTGACATAAATGGGTTTATTAAGCAACCAAACCACAACGGAGAAATGATCTTTTCAAATTTTCGAAATGATTTTCC # Right flank : AGTTGGCCTCTTGCCTTCTGGTAGTCATGCATTTAAAGTGAAATATCGTTTAAAAAAACGCTTCTTTCTTGCAGTGATAAGGCAAGATTGAAGCGTTTTTTTGTTTTAAAACAGTTCCAGTTGTGAGGGTTGTGGCTCGTTTGGCACTTCGGACCTGCCCCAAAAGTTCATGATATTGCCAAATTGTTTGTCGGTAATCCTGAGAACGCTAACCTTTCCCAAAGGCGGCAGTAAACGTTTGATGCGTTTCTCATGCACATCGGCACTTTCACTGCTTGCGCAATGCCGCATGTACACCGAGTATTGCATCATGGTGAAACCGTCCTTCAGGAGGTTTTTTCTAAAGCCAGCAGCGTTGCGTCGGTCTTTAGCTGTGTTGGTAGGTAAATCAAAAAATACAAATAACCACATAATTCTATAGGCGTTTAGTTCCATAATTTTGGATATTTGATTTTTTTCCGCTCGCCGGTATAACACTGTTGCAAGGAGCTTGCTGTTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAGACACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //