Array 1 129918-128669 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDLJ01000043.1 Escherichia coli strain 11229, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 129917 29 100.0 32 ............................. CTGGGGCTGCACATTGACAATAAACCGCCGCC 129856 29 100.0 32 ............................. ACTTGATTACCGCTATTTTCTGACGATTTAAT 129795 29 100.0 32 ............................. CCTGATAATTTACGCTATTCAGCGGAGATGAT 129734 29 100.0 32 ............................. TGGCTATAGTATCATATGATTTCTATTTGTCA 129673 29 100.0 32 ............................. CGGCTTGTTTAATTGCGTGGAACGTCTCAATT 129612 29 96.6 32 ............................T AGATCGCGCCACGAGGAAACGAATATGAACGG 129551 29 100.0 32 ............................. TGCCGCCAGGCCAGCGACACATCAGACAACTG 129490 29 100.0 32 ............................. GTCTGTGATGGCCTGCTCGTGAGTCCGCGGCG 129429 29 100.0 32 ............................. AATTTTTTATCCTCATAAACAGCCTCAGAAAA 129368 29 100.0 32 ............................. AGTTACGTCGCCATCGATATTAACGGAACACC 129307 29 100.0 32 ............................. CCGGAGATCATCATATTCTGATACGTTCCGGT 129246 29 100.0 32 ............................. CGTTATTTACTGCTTTTTCATCCGCTCTGCTG 129185 29 100.0 32 ............................. ACTCCGATAGCCTGCTCAGAATTAAGGCGCAG 129124 29 100.0 32 ............................. GCGTCGCTGGAAGAACAAAACCGCCTGATCGA 129063 29 100.0 32 ............................. GCACCACGCGTACCCCGATGTTTGTTTTGCCA 129002 29 100.0 32 ............................. GCTCCCTGTCAGTTGTAATCGATAACGTTGAT 128941 29 100.0 32 ............................. ATGTAGGGGCAATCGAACGATTCTCTGCCGAC 128880 29 100.0 32 ............................. TCGAAGAAGAAAGGGAAATAATGCGAGGAACG 128819 29 100.0 32 ............................. TATTACGCGCCAGCAATGCTGACAGCGGCAAA 128758 29 100.0 32 ............................. CGCGAGAGCCAGCAAAACGCCAGGGCACAAAA 128697 29 93.1 0 .A..........................A | ========== ====== ====== ====== ============================= ================================ ================== 21 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTATTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTACTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA # Right flank : CCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACCCCTCATGTTCAAAATAGTTCTCCATGCCAGAGAAGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATGTTGAATTAATATCTATTAATTTTTTCTTTAGGTTAATAGTTTGTTTTTTAAGCTTGTTATTCATTGATTAAGTAATAAATCTGAAAATTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATTACCGTTTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //