Array 1 1023888-1025258 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP062916.1 Raoultella terrigena strain Res13-Abat-PEB01-P1-04-A chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1023888 29 100.0 32 ............................. ACATGCTCTAAATGCAGCGGTCGTGGTTATGC 1023949 29 100.0 32 ............................. CTTGCGCTGCAGAGCATCATTTTCAGCTTTCG 1024010 29 100.0 32 ............................. GGCGACACTGCGCTGGTGGCCCGCGACGGCCA 1024071 29 100.0 32 ............................. CTGCAACTGCGGCCGACAGTTCAGCTTAACCC 1024132 29 100.0 32 ............................. ATGGCCGATCATTTTCCCCATGTAGCAGGCGG 1024193 29 100.0 32 ............................. GCAAAACGGCGCTTTTCAGTTCATCGGTGAGG 1024254 29 100.0 32 ............................. CTCTCCTCACAACCCATCCAGACATCACTGCT 1024315 29 100.0 32 ............................. CCCTTGATGGTGCCAGTGGCGATTATGCCGCA 1024376 29 100.0 32 ............................. GTCCCTGGATGCGTCAGGCACAGCGTCTTTCA 1024437 29 100.0 32 ............................. GTGTTCAGGCTCTGTGTATCGTTGAACGGGAA 1024498 29 89.7 32 .......T.................C..A AGATTTAGATCTTTAAAAGAGGTACAGAGCAG 1024559 29 96.6 32 ............T................ TCTTTCATCAAGAGAGTTTTGTAGTGCTTCTT 1024620 29 96.6 32 ..................A.......... TGGCCGACGGTATCCGAGCTATCGGGTAAGAC 1024681 29 100.0 32 ............................. TATCCGCGCCACGTTATCGATGCGGCGCGTAA 1024742 29 100.0 32 ............................. CGCGGGTCAGCAAATCAGATGGCTAAATATAT 1024803 29 100.0 32 ............................. GCGCGCTACCCGCCCTTCAGGTACAAGCTCAC 1024864 29 100.0 32 ............................. CCTAAACCGAAGTGGAACGCTGTATGCCCCCC 1024925 29 100.0 32 ............................. CCACCATACGAACCGATGTTCCCGCGCTCGCT 1024986 29 96.6 32 .............G............... ATGCTGCAGGATATCGGACTCTGAGCGCTTAA 1025047 29 100.0 32 ............................. ATCGAAAGTTTCATTGATTTCGTGGTCGAACA 1025108 29 93.1 32 ..........................T.A TGGGGACACATGGCGCACAAAACCTCAAAGCA 1025169 28 93.1 32 .............T.......-....... CTCCGCAGCGTTAACCTCAAACCGCGCCAACG 1025229 29 89.7 0 ...........A............G...C | T [1025253] ========== ====== ====== ====== ============================= ================================ ================== 23 29 98.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCGACCGGCGCGCTGGATCAACAAATCTATTGGCGCCAGATCCGAGATCATGCAGTCAAAATCCAGATCGAGGCTTTGTTCGACAACCTGAGTGGCGATCAATACTTTCCCCCGCCGCGCTGAAACGGGTGCATCTTTGCCGAACCAGCCGAGGGTTTTATTCTCAATGGCAATACGATCGGTAAAGGCGAAGCGGCTGTGGAAAAGTAGCAGGTCCTGTTCAGGGATGCGCTTTTCATGTAACAGCTGCTGATAACCTTCGCGTGCTTCATCAACCGTATTACGGATCCAACATACGCATTGCCCGGCTTCGACTGCACGATAGATAATTTCCAGCGCTTCCCGATGTTGCTGGATCCAGCTAACGATAACGGTGCGCTGAACTTCCGGGCGTGTCGTGAGCGCTTCTTCTGTCAGCCCTGTGGCAGATAGATGGCTTAACCATGGGTAGCCCGCATCACTGTCCGTTTCGGTAGTGGCAAATCCCGCACCTTTGTTA # Right flank : CTTCCTGGCTGACCAGCAAAACTCCGGCTAGCCGCGCTTATCGGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACCTTGACGACGTCGCGGCTGCGGCGTTCGATGCGGCCGGGCAGCGCTTTGTCGATATGCTGCTGATTATCCAGCTGCACGCTGTGCCAGCTGGAGCCGTCAGGGAAGGCGGGTGATTTTGCCCGCTGCTGGAAACCATCTTTCTTACCAAGCGACCAGTTGGTGGCCTCCACCGACAGCACCGGGATCCCGGCGCTATCAAAAATACTGGCGTCGTTACAGCAGCCGGTGCCCTGCGGATAGTCGCGGTTCAGCCCCGGGTTGCTGAAGGCGGCAATGCCTTTGCTACGGGCGATGGCCAGCGCCCGGTCGCGGGTGAGCTTGCGAATCGATGCCGGCGTGCTGCGGCCGCTATTAAAATAGAGCTTGTCGCCGACCACCAGATTATCGAGGTTGATCACCAGCAGGGTGTTTTTCTTCTCCG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //