Array 1 7232-8071 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PKGN01000006.1 Ligilactobacillus salivarius strain 290 contig6, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                         	Insertion/Deletion
==========	======	======	======	====================================	========================================	==================
      7232	    36	 100.0	    34	....................................	AAAGTTTAAACAAAATAATTTGTTTATTTTATTT      	
      7302	    36	 100.0	    38	....................................	GAGGTTGTATGAAACTATACAAGTTTTGTCAAACATTA  	
      7376	    36	 100.0	    34	....................................	TCAAGTACCCTTTCAATTTATCATGGCTCTTACT      	
      7446	    36	 100.0	    39	....................................	GCCAAGCGTTGATTTTTATTCATTTTTTTATTAAAAATT 	
      7521	    36	 100.0	    33	....................................	TACTCATAATTGAATACCTCCTCTTAATTTATT       	
      7590	    36	 100.0	    40	....................................	TGAAGCTATAGTTTATTTTTTGAAATAAAGCAATATTAAA	
      7666	    36	 100.0	    36	....................................	GGTCAGCTAATTCAAATAGAAAATCAATTACTTCTC    	
      7738	    36	 100.0	    39	....................................	AAAGCTTTATCTTTGTAAGCATTACTTTCCTTGCCACCT 	
      7813	    36	 100.0	    37	....................................	GTTTTCTCGTTTAAAAATAATGTTCTAATAATTTAAC   	
      7886	    36	 100.0	    37	....................................	TAGGCTCTTCCGTTTTTATAGTGTTACGGCTACCACT   	
      7959	    36	  97.2	    40	.....................G..............	CCTGCTGTTGTTAGTTCGATCATTTTTCTTCATCCTTTTG	
      8035	    35	  86.1	     0	........T...................-....TCT	|                                       	TT [8065]
==========	======	======	======	====================================	========================================	==================
        12	    36	  98.6	    37	AGTAAGAACATATCTCCGAATATAGGAGACGAAAAC	                                        	       

# Left flank :   ACAGGATTGAAATTACCGACTTTCATTGAGGAAGGAAGATAAGTATGATGCTATTAGTATGTTTTGACTTACCAAGAGACACGAAAGAGAATAGGAAAGAAGCAACTAAATATCATAAGAAATTAGTAGAATTAGGTTTCACAATGAAGCAATTTAGTGTGTATGAAAGAGAAGTGAGACAAAATTCTACTAGGGATAGAGTAATTAAAGTGTTAAAAGATAGATTACCTAAATCAGGTGCAATTACTTTATACTTACTTCCTAATGAAGTGAATGATTCACAAATAACTATTTTAGGAAGTGAATCTGTAAAGAAAACTGTTAGGAAACCTCAATTTATTGTGTTATAATACACTTACATTACTGTAAGGAACAGTAGTATAAATAAAACTTGTCTGAATTTTGACCAAATAATACTTATTAATTTAACCTATTGCCCGTTTAGGGTACCATTAAAAATGTCAATAATTGTTGATATATCAACTAATTGATCAAAGAGT
# Right flank :  TAATTAAAGTGATAAGAAGGAGAGTAAAAGTTAGAAAAAATAATATATAATATAGGTAATTAATTAGAAAGTGGTGTAATTATGACAACATTAATATCATGTATTGGTGATACAGATCCTATAAGAAATAGGCATGATGGGGCTTTATTGCATTTAGCAAGGGTATTTCGTCCTGAAAAAATATTATTGATATATTCTGAGCGTACTTTATTGAAAGAGAATAATATCTTATTAGCGTTAAATTCTATAGAAGGATATAGTCCTGTAATAAAAAAAGATGAGAGACTTATTTCCAATAGTGAAGTGTTTATTTTCGACAAAATGTATGAAATATTAAATAATGTAGTCTTAAAGTATTCTAGAGATGATGAGGATTTAATTTTGAATTTATCTAGTGGAACCCCACAAATGAAGTCAGCTTTATTTACTATTAATAGATTAAATGATATTAATGTTAGAGCTTATCAAGTAATAACACCTAGTCATTCTTCAAATGAAGG

# Questionable array : NO	 Score: 3.19
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     AGTAAGAACATATCTCCGAATATAGGAGACGAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:63.89%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-6.60,-7.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-8] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [75.0-80.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0.37   Confidence: LOW] 

# Array family : NA
//