Array 1 43193-41698 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACLZH010000025.1 Streptomyces sp. SS06011 25, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 43192 29 96.6 32 ..............T.............. GCGGCGAGACCGCACGGAAGCGGATCACCGCC 43131 29 96.6 32 ..............T.............. CGGGTGTCGAGTTCGGCGCCCACCACGTCCGC 43070 29 96.6 32 ..............T.............. TGCCAGACGGGGCCGCGGTCCGGCTCGCCGTG 43009 29 100.0 32 ............................. TCCGCGCTCGGCGCGAAGGTTGAGGACCTCGG 42948 29 100.0 32 ............................. TCCGCCGGGGTCACCCCTTCAGGGGCCGGCGA 42887 29 100.0 32 ............................. GTTCCGGTACATCTCCATCGCTCCGTGCCAAC 42826 29 100.0 32 ............................. TCGAGGAGGCCGGCGAACACGGCGGCGCCGTC 42765 29 100.0 32 ............................. TCGAGGAGGCCGGCGAACACGGCGGCGCCGTC 42704 29 100.0 32 ............................. GCCTCCGAACTGGACCGGCAGCGCGCCCAGCT 42643 29 100.0 32 ............................. TCCGGCGACGCTTTGAGGCCGGCACCCCAGTC 42582 29 100.0 32 ............................. ACCGTCGTCGACGCTGCGCGCGACCTGCGCAA 42521 29 100.0 32 ............................. AACCGACCCAATCAGTGCCAGGATCACCTATC 42460 29 100.0 32 ............................. CTCGAACAGTTCTGCGGCCCATTCAGCGGCAG 42399 29 100.0 32 ............................. AAGGTGACCGAGGCGTTCCTGAAGATGGCGAA 42338 29 100.0 32 ............................. GCCGTCACGTACTGGTTGGCCGCCTTCAGGTA 42277 29 100.0 32 ............................. CCGATCAGGAAGATGGTCGGGTCCTTCGCCAG 42216 29 96.6 32 A............................ GTCTGGGGCACCCCGGGCCGCGCGGACGGCTG 42155 29 100.0 32 ............................. TGGGGGCGAGGGAACGGGTCTTGCCCGCCGTG 42094 29 100.0 32 ............................. CCCTTCAGTGGCATCTCGCGACCCCCTGACCT 42033 29 100.0 31 ............................. TCCCGCGGCCGGGGAACGCCGGCGCGCTCGG 41973 29 100.0 32 ............................. GGGCGCAAGGGTCCCCGCGACGAGACCATCCG 41912 29 96.6 32 ..............T.............. GGCAGGGCGAACGTGCCGTAGTCGCGACCGCC 41851 29 82.8 32 ........T.A..T..T...A........ CGTCTGCTTCCCGTGTTGGTCCATCGGTCCAA 41790 29 79.3 34 .....T.TT........T......CC... CCGGCTGGGCCAAGCTGATCGCCAAGCAGGCCGA 41727 29 89.7 0 ...........T.T.........A..... | C [41702] ========== ====== ====== ====== ============================= ================================== ================== 25 29 97.4 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : AACGGCTCCTCTCACCGGGGAAAGAAGGCCATTGACCGTCTGACCAAGGCGTTTCCGAACGCAGTCATGGTCCACACCCCTGTCCACGCCTCATGGACAAACCAGATCGAAATCTTCTTCTCGATCGTCCAGCGCAAGGTCGTCTCACCCAATGACTTCACGGACCTGACCCAGGTCCGGGACCGGCTCCGAGCATTCGAAGACCGCTACAACACCGCGGCACAGCCGTTCCAGTGGAGGTTCACCACCTCCGACCTGGACGATCTGCTGGCCCGGCTCGACCGACACACAACCGCCGACCGACACCAAGAATCCTCCATCCCCCTGGCAGCCTGATCAACCCCCGAAGGACTTCCGGAGCCGACCACTTAGTCATAAGATGATCGGCTAACCATGGATGCGTCTACGGAACTACCCATCGCTTCATGTCCTATTTGCCGGAAGCTCTAAAGCTTGCTGAAAACACGCCTCTACGGCCATAAACTCGCAGGTCAAACAGT # Right flank : ACATTGGCCCGTCGGACCGCAGATGTTCTTCGTAGAGCATCACGTGCCGCCCACCCGCGCCGACGAAGACGCGGACGCGACGGCGGAGGAAGGGAGCGGCACCGCACAGTCGTACAGCCGCCCCCGGATGTGGCGAACGAGCGGGGAGTCCGCACCGTGGATGTCGGTGGCGACGGTGAGCAGGGCGGCGCCCAGGCGCTGCCGGTCCGGCTCCGGCGGTACGGCTCGCCACAGGCTGTAGGCGCGGCGGGTGGCCGCCTCGACGTCGGGGTGGCCCGGGCCCTGAACGGTGACGCGCAACTGGGCGGCGTGCAGGTACCAGGACAGGCCCGAGGAATGGTCGCCGGCGAGGGCGGCGAGGTAGCCGCGTACTTCGCGGACCTGGATCGTGAGCAGGTCCAGTTCGCCGAACTCGACGGTGGCGTCCTGGTCGATCCGGGCGGCGAGGGCAGCCGCGTCGCCCAGGTGTCCGTCCCCGGCGATCCCTGCGACCTTGACGA # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 56862-58524 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACLZH010000025.1 Streptomyces sp. SS06011 25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 56862 29 100.0 32 ............................. CGCGACCGCGCAGCCCGGAGCGAAGACCGTCG 56923 29 100.0 32 ............................. GGCTCGCCGGGATGCATCCGGATCGACTGCAC 56984 29 100.0 32 ............................. GCATCCTTCCGGCTCTGTCGCGAGTCGGACAC 57045 29 100.0 32 ............................. TCGGGCTGGACGCTGACGGACGTGGCGTACAG 57106 29 100.0 32 ............................. TCCCGCGACGTTCCCTGACCGGACGGCGGTGA 57167 29 100.0 32 ............................. GTCTGCTTCAGCTGAGACAGGGCGACCGCGGC 57228 29 100.0 32 ............................. GTCTTGCGAAGCTGCGTGCCCTTGAGGAGTGG 57289 29 100.0 32 ............................. ACGGCGGAAGTGGCCAGCACGTTGGGGATCAG 57350 29 100.0 32 ............................. TGGTGGCGCTCCGGGAGGCCACACCCCCGTTC 57411 29 100.0 32 ............................. CTCAACGCCGCGGCGGCCGGCGCCGCGCTGCT 57472 29 100.0 32 ............................. CTGCCTGCCGCCGACACCGTGGTGAAGACGGC 57533 29 100.0 32 ............................. TCACCGACGCCAAGCTGGACGACTTCACCGAC 57594 29 100.0 32 ............................. GAAGGAGGTGTGCGAAGAACTTGGAAATGGCC 57655 29 100.0 32 ............................. GACAAGGCACGCCTGAGCCTGGCCGCCGTCAT G [57676] 57717 29 100.0 32 ............................. GAGATCACCGCGGTGCCCTGGAAGGAGGCGAG 57778 29 100.0 32 ............................. GAAGCGGGCGCTGCGCAGTGTGGCCGCAGCGG 57839 29 100.0 32 ............................. ATCAGCCCCGTCTTGGGAACCCCATGGGAACC 57900 29 100.0 32 ............................. GCGCTGCTCCCGAAAACGACCGGCCTGGCCAA 57961 29 100.0 32 ............................. GACCCGTCCAACACCTTCCGGTACGCCTCCTC 58022 29 100.0 32 ............................. ACCGAGAAGCCGTCTGGGAAACCGACCGGCTC 58083 29 96.6 33 .................A........... CTCCTTCAGCACAGCCGATGTGTGGGCGAGGAA 58145 29 100.0 32 ............................. CCGGACAACGACGACGAGTGCCTGCTCCTGTC 58206 29 100.0 32 ............................. CGGGCTCCTCTCTGCGGGGGTACGGCCGGAGC 58267 29 100.0 32 ............................. AGGCCCTTGGTCGTGCTGGAGACGTTGGTCGT 58328 29 100.0 32 ............................. GCTCGAAGCGCTGCGCAAGCTGCGCGCCACCG 58389 29 96.6 32 .........................C... TGCTTCAGCCACCACCTGTACGCCGAGCCGTC 58450 28 82.8 16 ..A.......T...G..-......A.... GCCCTCCTGATCGAGG Deletion [58494] 58494 29 75.9 0 ...GC...G.T...T..T.......A... | GT [58507] ========== ====== ====== ====== ============================= ================================= ================== 28 29 98.3 31 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CGCCTCCGGCACCAACTACGACGGCCCTGAGGACTACGGGGACGAGCTCTGGTGACCGTCATCGTCCTCACCAACTGCCCGCCCGGCCTGCGCGGCTTCCTCACTCGCTGGCTGCTGGAGATCTCCGCCGGGGTCTTTGTCGGCAACCCCTCCGCCCGCATCCGCGATGCACTCTGGGAGGAAGTCCAGCAGTACGCGGGCCAGGGCCGCGCCCTGCTGGCTCACACCACGAACAACGAGCAGGGCTTCACTTTCCGCACGCACGACCACGCCTGGCACCCGACCGACCACGAAGGCATCACCCTGATCCACCGCCCCGACCCCAACGCCCCCGGCCCAGCTCCCCAGAACGGACCACCATCAGGCTGGAGCAGAGCCGCCAAACGCCGACGCTTCGGCAGAGGCTGATACACCTTGAGTACCTTATGGCCGATTTGCCAGAATCAATGAAGTTACTCAAAAACCGCCGTCGGCGTCCGTAAAGACGCAGGTCATCCAGT # Right flank : CTGGGTGGCCCACTCAATGGAGTTCCGGCCAAAGGCATCAACGACCACCGGCGCCAACGCGGGGACATCCTCGACGGACAGCACCGTGGAGTTACTTCCTGCTCTGCTCCCTGGACTGCGCCGGTTGCGGGTATGCGACAGCAGCCCGCTCGTGCTGCACGGTCAGCTTGGCCTGTTCCTGTTGGGCGGCGCAGCGCCCCGTCGTCTCCCGGTCATGCAGGTCGGGGAACTTCTCGGCGATCGCGGCGCGCAGGGCCTTCTCGGCGCGGACGTTGGCGGCTTGGGCGCGGTAGCTGGCGGCGAGCGTCCGGAACTCCCCGGCCCGGCGGGTCGCGCGGCTGACGTCGGCGTGGTCGCGTTTGTCGATGCTGTGGCCGTGCCGGGCGGCAGTGGAGCGCATCTCGAGGAGCCGCTCGGTGGCCTTTTCCGCGCGGTCGGGCACCGGTTGGCCTGCTGCGCCGAGAGGTTGGGCGATCCGGCTGTCCCGGACGGTCTCCCAC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 71511-70082 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACLZH010000025.1 Streptomyces sp. SS06011 25, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 71510 29 100.0 32 ............................. AAGGTCGCCGCCGGAGGTAATGCCAGTGTCCA 71449 29 100.0 32 ............................. CGCACCGACTCCATCCACTTCTCCGACCTGTC 71388 29 100.0 32 ............................. CACCCCAGCACCGGGGATGAGGTAGCTCCGAA 71327 29 100.0 32 ............................. TCGGGCCGGACTGGACGACCGCCCACCGCGAC 71266 29 100.0 32 ............................. ACCGCGGCCACTCCGCCGACCGCGGCCAGGAC 71205 29 100.0 32 ............................. TTGCTGCCCGCGGCCTTGTACAGCACAAGGCC 71144 29 100.0 32 ............................. GACGTCAGCGTGAGGCGGGCCTACGGATCGGT 71083 29 96.6 32 .........................C... GCGTCGATCACCATCTTCTGGGACCACAAGGC 71022 29 100.0 32 ............................. AGCTCGAGGGCAAGTCGAGCACAGTTCACGCA 70961 29 96.6 32 .........................C... CGCCGCCGCTCAAGCGGCCTACGACCTGCGGG 70900 29 100.0 32 ............................. ACCTCCTTGGATCTCTCAGACCTGGAGACAAC 70839 29 100.0 32 ............................. TGCGCGATCATGAGCCCTTACGGCGTCACGGT 70778 29 100.0 32 ............................. TGGTTCTCCTCGCGATCCCGGAGGGCTTCACG 70717 29 100.0 32 ............................. ATACGGTGGAGATCGCCTGGAACGGTGCACTC 70656 29 100.0 32 ............................. GCGAAGATGGGTCACCCCTCACAGGGTCTGAT 70595 29 100.0 32 ............................. GAGAGGTTCGATCAGGGGGGCGACGCCCTCGA 70534 29 100.0 32 ............................. GGCAACCGCCTCCTGGCGGTCCCGACCCAGCT 70473 29 100.0 32 ............................. AGGACGATGACCGCGACGACGGCGATCACAGC 70412 29 100.0 32 ............................. ACCACGGTCTTGCCGGCGCCGGTCGGCAGGAC 70351 29 96.6 32 ............................A GGGACGAGCTGCGCGACGCGACGGGATCCACC 70290 29 100.0 32 ............................. GACGCCGCCGACGCCTACACCCTGGTGCGCAT 70229 29 86.2 32 .........AT.TC............... AGCTCGTACTCGGTCTCCAGGGTGCCGACCCG 70168 29 100.0 29 ............................. ATCACCGGCCCCAGCCACAAGCGGCCGAC 70110 29 86.2 0 ........TTG..C............... | ========== ====== ====== ====== ============================= ================================ ================== 24 29 98.4 32 CTGCTCCCCGCACGCGCGGGGATGGTCCC # Left flank : CCTGTCGGCGAGTGTTGCAGTCTCGGCCCGGCGTGTCGCACACGACGCGCGCGTGCCGGTCGGCAGGGGGCGCGGTGGCTGGTCGTTCGTGGGGTGCTGGGGGGTGTGGGGGAGGGGGCAGAGGCGGGGCTGGGGATCCGAGGCGGGGAGTGTCGCAGGTATGCCTGACGTCTCAGCGAAGGTCGCTGCCGAGTAGGAAATTCGCTGTCGAGTACGGTGTCGCCGGCGCCCGGGTGGTGCGGCCCGGGCTCGGAGCCAGGCTCGTCACGGGGGCGGGCGGCTCCAGGACTTCGGTGCGTGGTCTTGGGCTGGGCTTACCGGCTGGCCGGTCGAAGCACGGGAGTCGTTCGTCCGGTGCTGCTGCTCTCGTGCGAGCAGATCGAGGTGGCAGCTGGCCTCCACGCCTGGAAGCCGCAGGTTGGCGTGTGTACTATTTGCCGGAATCTGTGAAAGTCGCCGAAACCGTGCCTCAGCGGCTGTAAAGATGCAGGTCAAAGAGT # Right flank : CGTGCCAGGCAGAAGACCGAGGCCGATGTCGGCTGCTCCCCGCAGCCGCGACCATGCCTGCGGCCGCGTCCCGTTTGCTGCGGGCGCAGTTCGGCCGAGCCGGAGCACCGCAGGAAGTGTCCCCGAACGAGGGACTCCCACCGACGGTGTCCGGTGCGGTAGGAGGTTGCGGCGTGGGTGTGAGTGACCAGGGGGACGAAGAGTGTGTCTTCACACCCCGTGCGTCGAGATCGTGCAGACCTACCTTGTGGATTCGGTGGCTGTCATGTGGGGCCCGGAGCAGATGGAAGTAGAACGCGGAGGTAGGTCTGTGCCTGCTGGGGGTTCCCGGCTCACGGACACAGGACTGGAAAGTCGGCCTTGACCCAAAGAGCACGGATAGCGGCGGCCTCGTCATCGGCGGGGTTGTCGTCGGTGCTCCATATTTTGGCCTGGGTGATGGAGTTGTCGACCGATGGCCAGCCCGGGTGGCCGGTGGCAGCGAAATCGGCCCATGCGCG # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACGCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //