Array 1 18632-17211 **** Predicted by CRISPRDetect 2.4 *** >NZ_APTB01000110.1 Neisseria meningitidis 2002007 gnm2002007.contig.109, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 18631 36 94.4 30 ........G...A....................... TTTTTGTATCCATTCCCAGCCGGAAATTAA 18565 36 100.0 30 .................................... CTTCTGCCTTTTTACAAGCTCGCTTTCTTT 18499 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 18433 36 100.0 30 .................................... CTTTAACTTTGACCGTGTGCAATCCAGTTA 18367 36 100.0 30 .................................... AACGGCAACCCACTAAATTTTGCAAATGCG 18301 36 100.0 30 .................................... AGTATTCGTCGATGATGGAAACTCGAGCAT 18235 36 100.0 30 .................................... ATGATGCAGGCTGCTCCGTCATCGTCTGCA 18169 36 100.0 30 .................................... CCAAATAGAAATACATACGCCGAGTAATTA 18103 36 100.0 30 .................................... TTTCTTTTTGTAATTGTTCTGCCTTTTTTA 18037 36 100.0 30 .................................... TACCCACGGCGGAAACCATTGCCACAAAAC 17971 36 100.0 30 .................................... TTAAAATAATAACCCAATACACGATGTTAA 17905 36 100.0 30 .................................... TCCTGCCAATTATCATACATAAGATTTTGC 17839 36 100.0 30 .................................... TTGCGTCTATGGTGTCCTTTGAGATGTCCA 17773 36 100.0 30 .................................... AAAACCAACCGGGTATTCATACACAGCCAA 17707 36 100.0 30 .................................... CCGTTGATGACGGATGTGTCGGGTTGCGGA 17641 36 100.0 29 .................................... TCGGCCGCTTTATTTCTGCCATATCGACG 17576 36 100.0 30 .................................... CCTATGCCTGTTATTGTTTTCAGCCTTTTG 17510 36 100.0 30 .................................... TTTAAAACCGCAAACCAGTTTGTATCCTAT 17444 36 100.0 30 .................................... AATAACAACCATTTTGTTATTTCGATTTTT 17378 36 100.0 30 .................................... TCCCGACATTGACGGAAAAACCCGAAAGCA 17312 36 100.0 30 .................................... TTATGCCGTTTTCATCCGGCTTGAACATTT 17246 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 99.7 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTCTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //