Array 1 25464-24043 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANSF01000019.1 Neisseria meningitidis 2001212 NM2001212.contig.18, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 25463 36 94.4 30 ........G...A....................... TTTTTGTATCCATTCCCAGCCGGAAATTAA 25397 36 100.0 30 .................................... CTTCTGCCTTTTTACAAGCTCGCTTTCTTT 25331 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 25265 36 100.0 30 .................................... CTTTAACTTTGACCGTGTGCAATCCAGTTA 25199 36 100.0 30 .................................... AACGGCAACCCACTAAATTTTGCAAATGCG 25133 36 100.0 30 .................................... AGTATTCGTCGATGATGGAAACTCGAGCAT 25067 36 100.0 30 .................................... ATGATGCAGGCTGCTCCGTCATCGTCTGCA 25001 36 100.0 30 .................................... CCAAATAGAAATACATACGCCGAGTAATTA 24935 36 100.0 30 .................................... TTTCTTTTTGTAATTGTTCTGCCTTTTTTA 24869 36 100.0 30 .................................... TACCCACGGCGGAAACCATTGCCACAAAAC 24803 36 100.0 30 .................................... TTAAAATAATAACCCAATACACGATGTTAA 24737 36 100.0 30 .................................... TCCTGCCAATTATCATACATAAGATTTTGC 24671 36 100.0 30 .................................... TTGCGTCTATGGTGTCCTTTGAGATGTCCA 24605 36 100.0 30 .................................... AAAACCAACCGGGTATTCATACACAGCCAA 24539 36 100.0 30 .................................... CCGTTGATGACGGATGTGTCGGGTTGCGGA 24473 36 100.0 29 .................................... TCGGCCGCTTTATTTCTGCCATATCGACG 24408 36 100.0 30 .................................... CCTATGCCTGTTATTGTTTTCAGCCTTTTG 24342 36 100.0 30 .................................... TTTAAAACCGCAAACCAGTTTGTATCCTAT 24276 36 100.0 30 .................................... AATAACAACCATTTTGTTATTTCGATTTTT 24210 36 100.0 30 .................................... TCCCGACATTGACGGAAAAACCCGAAAGCA 24144 36 100.0 30 .................................... TTATGCCGTTTTCATCCGGCTTGAACATTT 24078 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 99.7 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTCTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //