Array 1 34349-31340 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE145375.1 Lactobacillus delbrueckii subsp. lactis CRL581 scaffold00002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================================================================================================================================== ================== 34348 36 100.0 30 .................................... ATGTGGCCGTGTTCTTTTAACCACGCTTCA 34282 36 100.0 30 .................................... AAACGGGGCGAAAAACAGGGCGAAAACATT 34216 36 100.0 30 .................................... GATCGAGCTTGAAAATAAGCTAGGCGTAAA 34150 36 100.0 30 .................................... GCCAACTGCTCCGACTACGACATTCGCAAA 34084 36 100.0 30 .................................... TCGTGACGGACAAGGCGGACAAGTTGAAGG 34018 36 100.0 30 .................................... GCTCCAGGCGTGGGTAAAACCACATTGAGT 33952 36 100.0 30 .................................... AGTAGGTAAACGCGGTTTGACCATACTTGC 33886 36 100.0 30 .................................... TAATTATAATTCGCAAGTTTTTAAAAAAAA 33820 36 100.0 30 .................................... TAGTAGACCCTTCAAACGTAATTAAAACGT 33754 36 100.0 30 .................................... AACCACCAGGAAGATAAGGTCTTAGAAGGC 33688 36 100.0 31 .................................... TGCATTTAGGGTATTCAATCTACCCTCAAGG 33621 36 100.0 30 .................................... AAGCGGACCCCGAAGGATCCGCTTAGCCCC 33555 36 100.0 30 .................................... CAGCTTTTCGTTTTTCACCAAGTTCTTTTT 33489 36 100.0 30 .................................... GACGGATGCGCAAAAAGATAGCTTCATCCG 33423 36 100.0 30 .................................... CAACGTGAAGGGCAATGCCCCAACTCCCGT 33357 36 100.0 30 .................................... CAAGCAGATCAGCCAGCTGATAGAGGATTT 33291 36 100.0 30 .................................... CCACGATGCACAGGATGGTGAAAGCGTAGC 33225 36 100.0 30 .................................... AAATTGGCGGACGACTTATCTAGAAGGTGC 33159 36 100.0 30 .................................... GCACGGATTTTTCGCCCCACTCGGAACACC 33093 36 100.0 30 .................................... CATCAAAAAGAGCACCCGTCATAGGTGCTC 33027 36 100.0 30 .................................... TCTAGAGCGACATTTTGGAAACTGAGAGAG 32961 36 100.0 30 .................................... CCATCAAAGCCCTTCGTGATCATAATTGGA 32895 36 100.0 45 .................................... NNNNNNNNNNNNNNNNNNNNAAAGCCCTTCGTGATCATAATTGGA 32814 36 100.0 30 .................................... CAGGAAGCCACTAAGTGGGCGCAGGACATC 32748 36 100.0 30 .................................... ATCCCAGTTTGACGGACAACGTCCGCCTTC 32682 36 100.0 30 .................................... ACCTTGCTGATGAAGTTAGCCCCACCTGGA 32616 36 100.0 30 .................................... AACCACCAGGAAGAAAAGCTTGTAGAGGGC 32550 36 100.0 30 .................................... GGACACGAATCGATAGACATCACCATGGAG 32484 36 100.0 30 .................................... GCGACAAAAAGTATTGCGACTGTTCGGCGT 32418 36 100.0 30 .................................... TCAACTTTATTTAACTTGATAAATAGTCTA 32352 36 100.0 30 .................................... TAAGATTTTACGGCCGTTCTTAAACCAGTA 32286 36 100.0 30 .................................... GCGAAGAGCTAGTAGCTATCAGACGGCATC 32220 36 100.0 30 .................................... ATTTCTCGCTGATTTAGTACTCATTACCGT 32154 36 100.0 31 .................................... CTAGCCACAACTGCTCTGATTTCCTGCTCAC 32087 36 100.0 30 .................................... TAAGGAAAAAGAATAATGACAGTTTTTGTT 32021 36 100.0 30 .................................... TAAGGAAAAAGAATAATGACAGTTTTTGTT 31955 36 100.0 30 .................................... TAAGGAAAAAGAATAATGACAGTTTTTGTT 31889 36 100.0 30 .................................... CTGAAACCTCTCATGGTCAAGTATTGTGCT 31823 36 100.0 30 .................................... ATTCCTGCTTTGGTCTTTGGCGGCTGGATC 31757 36 100.0 30 .................................... AGAAGATGCAGTAAGTCACAAGATCTACTC 31691 36 100.0 30 .................................... AATGGCGATCTCACACATCGCCTAGAAAGA 31625 36 97.2 30 A................................... TAGCTAGAGCGGATATCAAAAATACTTCTA 31559 36 94.4 148 ................C...T............... GTTGTGTAGGTTCAAATCCTGTACTCTCCTTGTTTTGGAATATTTCCATTCAATGTTGTCAATTTTCCCGACGTATGTTGAGGTGGCCATCATAATGACCTAATACTAAGACGACAATTCTACTCATTCCACGCAGGTGGGGGTGATT 31375 36 75.0 0 ..........A..........C...G..GAC..AAG | ========== ====== ====== ====== ==================================== ==================================================================================================================================================== ================== 44 36 99.2 33 GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC # Left flank : CAGTGAATCTTTACTTCAAAAGTACATGACCAAATTAACTAGTTATGTAGTTGATGAGCTAAGCGCAGATGGCAGAAACAGAATCATTACCTTCTATCGCGATTTACTAAATGCTGTTCAAGACGAGTTGCTTATGGAAGATTTGCCGCTTGAAATAAGTTTTGACACAGACTTGAAGAAACTCTTCAAATTTGGTGGTTTACACTTCAACAAGACACTCACTCGCGATCCATATGGTATAATCGAGACTGTACTTAGGATACATGACAGGTTAGATCTTAAGTCTACTGTTGTTTTTAGTAATGTAGCTCATTACTTAGATGCAGAACAGTTTATAGAAATATCTAAGCTGTGCTTAGAGCTAAAAAAGTCTATCATTTTTATCGAGTTTTGTAGCCATACGGATCAGGTTGTATATGGTGATGCAAAATTCAGTTATATCGATGAAGACCTTGTTGATTGGTACTAGCCTTAAATTAAAGCTGTGTTAAAAAACAACG # Right flank : TGCTTTTCATGATTGAGAAGCACTTTTTTCTGTTGAACACAAGAACTTAAAAAAACGCTAAATCAAACGCTTCACCAAGCAAGCAGGAAAAGATTATAGTAAAATATACTGGTTACAAAAAAGCTGAGCCAAGCTCAGCATCCCCAAAACAAAACTTAGTTGAGGAGAATAAACATATGCAAGATATTTATATTGTTGCGGCCAAGCGAACTCCATTTGGCCGTTACCACAAGCAATTGGCTGACTTTTCTGCTATCGACCTGGGCCAAATCGCCCTGCGTGGCGCGTTAAAAGAAGCCGGCCTTGACGCCGAAGCCCTGGATGCCCTCTTCATGGGCAATGTCCTGTCTGCCGGCTTAGGCCAAAACATGGCCCGGCAAATCGCCTTAAACACCGGGATGCGGCAAGACTCAGTCGCCGTGTCCATCAACGAAGTCTGCGGTTCCAGCCTCAAGGCGGCCCGCCTGGCTGAAGCCCAAATGTTAATCGGTGACCTGGGC # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.23, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //