Array 1 30839-33923 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXHL01000070.1 Moraxella catarrhalis strain N19 B749ctg5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 30839 28 100.0 32 ............................ GAACCTTTGTAAATTAAAGAAATCTCATTTTT 30899 28 100.0 32 ............................ CATGGCTATTTCACCGCGTGCGATGGTATCTT 30959 28 100.0 32 ............................ TCCAGACACAAATAAGGAGGTTGGTTGATGGA 31019 28 100.0 33 ............................ AATGTATCAGCCCACCAATCTATAGACGCATAA 31080 28 100.0 32 ............................ ATAATAACTACTGCGAACATACTATTCTCCTC 31140 28 100.0 32 ............................ AAAACATACACACGCACAAAAACAGGCGATAC 31200 28 100.0 33 ............................ TAAAGTACCTAACTCAGTGTCTGCACCTATGGC 31261 28 100.0 32 ............................ ACTACTCTGTAGTTCGTAAGAACTCTAGAGCT 31321 28 100.0 32 ............................ TTGCTCAATGGTAGCGTTCACAAGCTTTTCAA 31381 28 100.0 32 ............................ TTTTGATGCCCACTTGCCCTTGGTATGCGGTA 31441 28 100.0 32 ............................ TATCTCATAAATAAATGGCTCACTTGGCGGAA 31501 28 100.0 30 ............................ TTTTAGTCAAAGCGAAAAGAATTACAGCTA 31559 28 100.0 31 ............................ ACTTTACCTCTACGCTTTCTGCACCAATATG 31618 28 100.0 32 ............................ TTTTCACCGAACAAGTTAGGGAAGTAACTTCC 31678 28 100.0 32 ............................ ATAAAAAGCCCTAAAATTGAAGTGTAGACAAC 31738 28 100.0 30 ............................ AAACCCTGTGATGATTGGCGTTGAGCAAAT 31796 28 100.0 32 ............................ TGCTTCTCTTACGATTAACATGATGATACCTC 31856 28 100.0 34 ............................ GATAGTTCAGCATCAATTTGTTCAAAAGTATTAT 31918 28 100.0 32 ............................ AATGCTTAAAAAACCTGTTCAAATTTCAAACC 31978 28 100.0 32 ............................ TTGGCATAGGTGAGCATGGCGGTTTTATATCG 32038 28 100.0 32 ............................ TATAACTTATTTACCTCGTCATCAATTTTGTA 32098 28 100.0 32 ............................ AATAACTACAACTTCTGCTAATTCGTACATGT 32158 28 100.0 32 ............................ GTTATTTAACTCTAGCTATATTATATGATTAT 32218 28 100.0 32 ............................ CTTACTATTCCTCATTACTTTGGCGATAATTT 32278 28 100.0 32 ............................ ATTATTCAGTGTTTCGCTAATGCGGTAAGTTG 32338 28 100.0 32 ............................ TTGGATATACCAATATTGCTCAAAAATATCGC 32398 28 100.0 32 ............................ GATAAACTGACATTGATTTAAATCACTCATAA 32458 28 100.0 32 ............................ TATCTAAGATAACGGTACCGAATAAGTATTGC 32518 28 100.0 32 ............................ ACAAATCACAGATGATAATAGAATAAATATGA 32578 28 100.0 32 ............................ GTCTTCGAATACGAAGTTTAGGTTCTTAACGT 32638 28 100.0 32 ............................ TCCATCGTATTCACGGCGTTCCAACCATGTAT 32698 28 100.0 31 ............................ GTAAATGACGCAAATTCCACATTTTCCCTAG 32757 28 100.0 33 ............................ TTTTAACATTTTGCTTACTCATACCAGTATCAA 32818 28 100.0 32 ............................ CGAGTACCTCGAGAGCTTCCTCTCTAGAAATT 32878 28 100.0 33 ............................ TGCCCAATTCATCGCAAAAGTTATTTTTGCAAT 32939 28 100.0 27 ............................ CAGCTTTTTCTAAAGCTTTTACCAATT 32994 28 100.0 32 ............................ ACCGATTTACAGGGGCAAGTTTAAAGGTCATC 33054 28 100.0 33 ............................ AGCCAACAGTCATTGACTGTCATATTGCTAGTT 33115 28 100.0 32 ............................ AACCAGCCAATCTGTTGAGTAGCTTTCAATAT 33175 28 100.0 32 ............................ ACAATCGAGCAAAAGCTAAATATTCAATTCTA 33235 28 100.0 32 ............................ ATACATTGATGGCGATAATAACAAAGCTAAGC 33295 28 100.0 32 ............................ GACGTCTAGCTGTATTAATAGCTGCTTTCTGT 33355 28 100.0 32 ............................ TCTATATCTTGAAATTCAACCGTCATAGTAAG 33415 28 100.0 32 ............................ TAGAGATAGTCTTTGATTATGTTGATTCTCTT 33475 28 100.0 33 ............................ TTGGTAAAAGACAATATCATTGATACTAATTTT 33536 28 100.0 32 ............................ AAGCCATCATTGAATACCCAAAATCACCAAGG 33596 28 100.0 32 ............................ TTTTTGTTCGATTGGGGCAAATGCTTGTTAAT 33656 28 100.0 32 ............................ TCATATTGTTTGGCACATAACTGGCTTCTTAA 33716 28 100.0 32 ............................ TGTGTCGATTAAAGCAGAATTGATCAATCATC 33776 28 100.0 32 ............................ AACACCGTCCGCCAGCTTGGCGTTGATGGCTT 33836 28 100.0 32 ............................ TTTTAACGGCAGGGCTAAAATTTGCGTTGCTG 33896 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 52 28 100.0 32 CTTCACGACCGCACAGGTCGCTTAGAAA # Left flank : GTGCCTGTGCCAAGTAAAATTACTGTGGTATTGGCGATGGGGATATTATAATAGTGGTTTTGGTATTTCGTTTCGGTCAGATATAAGATACGCCCGTCTTTTTGCATGACTCGGCAATGCTCAAGATAAAATAAATTCGCCCGTTTGGAATGTAAAATTGCTTTCAAATCGGTCGGTTTGAGCGTATTCATAATGATACAAATCCATGTTTAATGATTCAATTTTATCCTAACAATTTTCAACATCATTTAATATGATTTTATTGGATTATAAACTAAAAATAAATTTATACCAATCATTTTTTAATTGTATTTAGCGATTAAAATGTTTTAAGATAACCCAACCAGAAGATGGCAAAATAACGGATTGACCCTTTATTTTTTACTATTTAAAAACTTGAATATTTTCAATAAGTTATAACATTCAGATTTTTGATTGGGTTTTTGACAAATTTTATCATAATGGCTTGTTATTTCTTATTATTTTGGTTTATAATAACT # Right flank : ATTTCGTTCTACAACTACGCTGATTATTTAAAATTTTTGTACCAATCCCTTGAAAATTTTATCCTTAACCATTATGAAGATGGGGAATTTATATTAACTTTTTTGGGGTAATTTATGACCGAGCAAACCACCGAACAAACCACCATGGAAGAGATTACGACTGAGACAACAACCGAGCAAGTCGAAGCACTTCACAGCCAAATCCAAGCACTAGAAAGTGAAGTCAAAGAAGCCAAAGAGACTGCTGCGCGTGCCAATGCCGAAAGCTATAACGCCCAACGCCGCATGGAACAAGAAACCGACAAAGCCAAAAAATTTGCACTACAAAAGTTTGCCAAAGAGCTTTTGGAGGTGGTTGACAACCTAGAGCGTGCCATTAAAGATGCTGAAGAGACAGGTGCAGATGACGCATCACTTGAAGGCATTCGCCTAACACATAAAGTACTGCTTAGCGTCCTTGAAAAAAATGGCGTCGTGGCCGTGGGTAATGTCGGTGATAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCACAGGTCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [81.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //