Array 1 34727-33238 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHZPO010000013.1 Streptococcus mitis strain SY89 Smitis_SY89_NinaOddballs_Sia_NO_13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================= ================== 34726 36 100.0 29 .................................... AAATCTAAAAGATAAAATACACTTATTTA 34661 36 100.0 30 .................................... TGTTGGATATCCTAGATGGTAAGAGTGTTA 34595 36 100.0 33 .................................... CACCTATCATTAACAAAGATAAACTGGTACACA 34526 36 100.0 30 .................................... GAACCCGAACGGAAACGGGCGACAAGCAAG 34460 36 100.0 30 .................................... AAAACGCTCTTTCAGATAACGTTCAATGTA 34394 36 100.0 30 .................................... GTAAGCAAGATGAAATCATGAAGCAGGCGC 34328 36 100.0 30 .................................... TTGACCTTGATAAAACGTACACGGAGACAG 34262 36 100.0 30 .................................... CTGACGCAGTTCAGGCGTTTGCCGAAAGTC 34196 36 100.0 30 .................................... GGTTTGAAACTCTTTTTGTTAGTGTTATAT 34130 36 100.0 30 .................................... TGATGGAAAACTTGGTACACCTGGAACTCC 34064 36 100.0 30 .................................... AAAACGTTCTTTCAGATAACGCTCTATATA 33998 36 100.0 30 .................................... CTTCGGCTGGAATGGTAACGGTAAATTCTT 33932 36 100.0 30 .................................... ACGTTGCAAGAAATCTATGTACACCCAGCA 33866 36 100.0 30 .................................... CCTTGGGCAATAAACCCAAACGTGTCATCA 33800 36 100.0 30 .................................... ATACTAAAATTATTTTCAGAGCTGACAATA 33734 36 100.0 30 .................................... GGATTTCAACCGATTCACCCCAAAAGCGCA 33668 36 100.0 30 .................................... ATCTAAAAGAGAGTGAGCAATATCATTATG 33602 36 100.0 29 .................................... CTAGGGGCAGATAGACTTATAGCTAAGTT 33537 36 100.0 30 .................................... TTGGCTGTCTTTCAGCGCCCACAACTCATT 33471 36 100.0 30 .................................... GTACTATTTATTCTGACTGGGCATCTATTG 33405 36 100.0 30 .................................... TAATGGTTATAGAAATAAAGATAAGGAATT 33339 36 100.0 30 .................................... TGACATCGTAGGTTTGAAAACTACTGATTC 33273 36 91.7 0 ................................T.TT | ========== ====== ====== ====== ==================================== ================================= ================== 23 36 99.6 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : GGATGATTTTTTATCCTATAATGATTTTGTTGAATGTTGCGAGAAAATGGAGTTTCTGACTAATCATAGCGATTCATTATATATTGTTTTATTTCCTTCCAATGAAGGTTATCTTCATGTCACGAAAGAAGTTTTAGAGGAAATCAATATTGTTTCCGATTATGTTGATCATTTTTATTCTCTAGAATTTATGTATGATCGCTTTACCAATCAGTATCCAATAAATCAAATACCTGATGAACAAGAATTTTTAACTTCTTTAAGAAAAATTGGATCCTATTTATTTAGCTCGGACATTCTCCACATGAGTTTATCTGTAGAAGATCAAGTAGCATTAAAAATTTTGAATAATTTGTATCAGTATAAAATGAAAACAAAATTCTGTATTGAATCAATCAATCCAATGTTATTGAAATATTTGGAATAATAGTATTGACGAGTGAGATTTAAGGCTTTATAATATTTTTGAGGGAACAAAAATCAAAATTGACGAATTTGAG # Right flank : TAGATAATATTAGCAATTGTCTAACTTATATAAAAAACCGCTCAGCTGAGCGGTTTTCGTTTATTTTTTTCTTTTACAGTACCCACGTACGGATGGCGTGGGCAACGCCAGATTCGTCATTTGTTTTAGTGATGTATTTGGCGATTTTTTTGATTTCTGGATTTCCATTTTCCATGACAACTGGGTTACCAACGACTTCCAGCATGGCGCGGTCATTTTCTTCGTCACCAATCGCCATGGTTTCATCTTTGGTCAATCCTAGTTTTTCAGCTAAGTGAGTAATAGCTGAACCCTTGTCTACATTCTTTTTAAGGAGTTCGAGGTAGAAAGGAGCAGACTTGTTGATGGAGTAACGTTCGTAAAATTCTGCTGGGATTTTTTCAATCGCAGCATCGAGAATTTCTGGTTCATCGATGAACATACATTTGACGATTTCCTTGTTAGCCATTTCTTCAGGTGTGCGGTAGAAAATAGGCATGCTGACGAGGGTTGATTCGTGC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //