Array 1 2107-3514 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSVI01000015.1 Ligilactobacillus salivarius strain FJLHD2M8 Scaffold15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================== ================== 2107 36 100.0 30 .................................... CCTTTTCCTTGCCATACAAGGCTTGAAGCT 2173 36 100.0 30 .................................... AAAAACGGTAGTTAAAAATCTGAATCTTGA 2239 36 100.0 30 .................................... GCGTGCTAACATGGCTGAACTATCTTCAAC 2305 36 100.0 30 .................................... GTGCGATACGTTCAGTAACATATCTGTGGT 2371 36 100.0 30 .................................... TAGACTTTTGATAACCATTCTCGACCATGA 2437 36 100.0 30 .................................... AAACACTCCAAGTGTTCAAGCAGCTAGAGG 2503 36 100.0 30 .................................... AGATGTTTTAACGTTTATCAACTACAACAG 2569 36 100.0 30 .................................... AGATGTCGGTGGAATATAGCCCATGAACTG 2635 36 100.0 30 .................................... GAACCATTTACTTCATACGTGATGTTGGCG 2701 36 100.0 30 .................................... TTGCTGTCTTACACCTATGTCAATTCAACT 2767 36 100.0 30 .................................... TTGACTTTTGATAACCATTCTCGACCATGA 2833 36 100.0 30 .................................... AAACACTCCAAGTGTTCAAGCAGCTAGAGG 2899 36 100.0 30 .................................... AGATGTTTTAACGTTTATCAACTACAACAG 2965 36 100.0 30 .................................... AGATGTCGGTGGAATATAGCCCATGAACTG 3031 36 100.0 30 .................................... GAACCATTTACTTCATACGTGATGTTGGCG 3097 36 100.0 30 .................................... TTGCTGTCTTACACCTATGTCAATTCAACT 3163 36 100.0 30 .................................... AAGTTCACACGAAAAGCCCTATGACAATAC 3229 36 86.1 29 ..........T.........T...A......G.T.. ATCTGCGTTCAGTTGGTGTCTCAATGCTC C [3262] 3295 36 94.4 82 ........................A..A........ ACAACTGGAGTTTGAGTACGTTTAGCTTGTGTTTCAGAAGTATGTTAAAAACCTATTATATGTTATAATATGAAAGTGTTTA 3413 36 83.3 30 .....G....T.........T.........G.T..T AGTAATTCACCGCTAGTTAAGTGGTTTTTT 3479 36 80.6 0 ..........A.........T...AG...CG..G.. | ========== ====== ====== ====== ==================================== ================================================================================== ================== 21 36 97.4 33 GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCGAATTAGTAAAAAGTATATGAATGTATTAATTAAGAAGATTATTGAAGACATCACAGACGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGAGAGGTTTTGTATAAAATTGATATACCATTACAAGTAGATTATGACAATGATTTAACAAGACTATTTAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACTCATCAATGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAGCTGTGATAATTACTACATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAGTAACG # Right flank : CTAAAATACAAAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGATATATTATGGTTGATAATGTAATATTATATGATATATAATATAGTTGAAGATGAGATATAAAAGAAAGTGAGGGATGATGATGAAAATTCAAGTTAGTTCTGATTTACTAGATGGTTTAGTATTAGCGCTTTTAGATAAGCAAGATTATTATGGATACTCATTGACACAGGATATGCAAAGAGCAATTTCAATTTCAGAATCAACACTCTACCCAGTATTACGAAGGTTAAAGAATAATGGTTTATTAGAAACATATGATCAATCATATCAAGGGAGAAATCGTAGATATTATCGCATAACAAATAGTGGGGAAGAACATTTAGGAAGAGTTAAAAAAATGTGGAGCGACTACAAAGTTAGTTTAGATTCAATTTTCGAAAAAAACTAGGGAGGGGGAATAATAATGAAC # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:-0.17, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //