Array 1 4808-154 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEQA01000067.1 Acinetobacter baumannii strain KUSSH09 NODE_67_length_8293_cov_2.92052, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 4807 30 96.7 30 .............................A CTGAAAGAGTAACTAACTGTTTAAAGAAAC 4747 30 96.7 30 .............................A TTCCTATTTATTTTGAGCCTAATACACCAA 4687 30 100.0 30 .............................. TCCAACGAAATTATGACGCTGACAAGTCTC 4627 30 100.0 30 .............................. CACAAGACCATACTCACGAATAAATTGTTT 4567 30 93.3 30 ............................AA CAGGAACTTTTGCAGGTCGTAGCCAAAGAA 4507 30 96.7 30 ............................A. CGTCACAGCGCACTGGTTACTTAAAACAGG 4447 30 96.7 30 ............................A. CAACAACTTTATTAGCCTTCACAAGACCAT 4387 30 93.3 30 ............................GA TACGGGTAAACCGTATGAATGGGTTGATTT 4327 30 93.3 30 ............................AA AGATATTACTGGTGTATAGAGCTGAAGATT 4267 30 100.0 30 .............................. TAGATACAGGCGTTGATTCTGCAAAAGTGG 4207 30 96.7 30 ............................G. TACCCAACCCTTTATCAATCTCTCGACCAA 4147 30 93.3 30 ............................AG GGTGCGCTTGCACGTCAAGAATATCTTGGT 4087 30 93.3 30 ............................AA CGAGATACTGTTTCAGGAGATTCACCCAAA 4027 30 100.0 30 .............................. TTTTTAAGTGTTTCATCCACAACATCATAA 3967 30 93.3 30 ............................AC CATCAATCGTGAAGCATCAAGGCGATAAAG 3907 30 96.7 30 .............................G CAAGACAGCTATATAGAACAGTTGGAAAAT 3847 30 96.7 30 ............................A. AACTTGCTTGTACGTTTCTAATCTTCAGTT 3787 30 93.3 30 ............................GG TGGAAAATGTACATAGACATTGCACCGAGA 3727 30 93.3 30 ............................CC CAAAGGCTCAAGAGTTGAGCGCGTCAACTC 3667 30 100.0 30 .............................. GCGAGTCAAGCCGACAAAGTAATCGCTATG 3607 30 93.3 30 ............................AC GGTGTCAGAGTTTTAGAACTCAATGATGGC 3547 30 93.3 30 ............................AG TTAATACCCGTTGGCCATATTGTTCAGTTT 3487 30 100.0 30 .............................. AGTCGCATTAGCGCAAAAGCTACGTGGATT 3427 30 96.7 30 .............................A ATGATGAAATCGATGAAATGTGGCGCTATG 3367 30 100.0 30 .............................. GTTGCAACACCGCCACCGCTGTGCCTTTTG 3307 30 100.0 30 .............................. CAATGTGTTTAAGATCGGGTCAAAAGCTAC 3247 30 93.3 30 ............................CC CAACTTTTTAAATATTTAATTCTTATAAGA 3187 30 93.3 30 ............................AA CGAGAAATTGGAACTACAAAAGAACCAAAA 3127 30 93.3 30 ............................GA TTATTCTGGTTATAACTTTGTCTGTGTAAT 3067 30 96.7 30 ............................A. CTTCCGCAATGGCCTTTTTGAATGCTTCAT 3007 30 93.3 30 ............................AG CCACGTCAACAGCAGCATTGGCATTAGTAA 2947 30 93.3 30 ............................GC TAAAGGCTAAAGCAACCAAGGTGAATCTTA 2887 30 93.3 30 ............................GA CGAGCAACACGTCAACGAACTCAAAGCAAA 2827 30 93.3 30 ............................GA CATGGCGAGTTGCAGCAGGAATACCATAAT 2767 30 93.3 30 ............................GA GTAATGCAGCACCAACAGCAGTAATCGCAG 2707 30 96.7 30 .............................G GAAGTCATGAATGTAGGTGTTGAGGATGGC 2647 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 2587 30 96.7 30 .............................G ATGCGGGTTGTCCACCAGTTATGACTACTT 2527 30 93.3 30 ............................CC AAGCTGTGAATGTTGGTAATGCTTTAAGCG 2467 30 93.3 30 ............................CG TCAAAACAATCAAAAAAGCAATGAGTACAA 2407 30 93.3 30 ............................AG TGAATGGGATTTATTCGCAAGGTGATATTA 2347 30 100.0 30 .............................. GTTTCAGTTGCATAGTCAAACGATGAGAAC 2287 30 96.7 30 ............................A. TAGCAGGTGATTACGCAGTCTTATCTAATG 2227 30 96.7 30 ............................A. TAAGCAAGGGCTGACCCCGACCGCCGAGCA 2167 30 96.7 31 ............................A. TGACTTACAGCGTTATGAGAGATCCCTAGTT 2106 30 96.7 30 .............................G ATGATTGGATAGAGATTCATGCGTTAGATT 2046 30 96.7 30 ............................G. AAAAAAGAACATTTCCCGCCAAAATTGACG 1986 30 100.0 30 .............................. TGGCAACCAGTCGCCCTATGCGACCTGATA 1926 30 96.7 30 .............................G TAAAAAAGTTTAATAATTTTTTCAGTGAAT 1866 30 96.7 30 .............................A CAGCAATAACGACCAAACCGATATAGGTAA 1806 30 96.7 30 ............................A. ACGAACATCATTTACTTGCTGAAGTTGCTT 1746 30 96.7 30 ............................A. GCTCTCAATAATTCGCAAGTAAAAGTGGAT 1686 30 93.3 31 ............................AA AAAGTTTTTTTGACAATCAAGCCGGCAAGTT 1625 30 96.7 31 .............................G CATCGAAGTCATAGAACGCTTTGAGTTTCCA 1564 30 93.3 30 ............................GC AAGTGTCACCTTTAAGTGCACGGAAGAAAT 1504 30 96.7 30 .............................C CATTCTCGCTAAGTGGCATCACACGCGATG 1444 30 100.0 30 .............................. GGTTGTTTAGTAAGTTCAAAGCCCGTTGTA 1384 30 93.3 30 ............................CA ATGGATTTAAAGATTTCAACCGCTTGGGAG 1324 30 93.3 30 ............................AG TTGATATGATTATTAATATTAAAGTTGTTT 1264 30 96.7 30 .............................G TGCCCATTCCCGCAAACACGGCGCAACGCT 1204 30 93.3 30 ............................CA TGACCCAACCACGTAAATTCATACCACACG 1144 30 93.3 30 ............................GC TCCGTAATTAATCAAGAAATAATCAAATTT 1084 30 93.3 30 ............................AG TAGTTGCACCAGACTCCGCACAATCTAAAA 1024 30 93.3 30 ............................AG CAAATAGATCAACTGGTGCGCCCTATGAAT 964 30 96.7 30 ............................A. CATCGAAATTTAGTTCTAATTCTTTAATTT 904 30 93.3 30 ............................AG TCTTTAATGTCGGCAACATGCTGTGCAAAA 844 30 96.7 30 ............................G. AAATATGCTGCTTTAACCCGCCAAACGAAT 784 30 96.7 30 .............................G CATTAAGACGAATGCGGGCAATTGGTAATG 724 30 93.3 30 ............................GA GATTCAAGTTTCACCGGATGGCACAAGTAA 664 30 93.3 30 ............................AC CAGAAAAGCAGAGTAAAGCTTCACAGCCAT 604 30 96.7 31 ............................G. AAAAAAGAACATTTCCAGCAAAAATTGACGA 543 30 100.0 30 .............................. GCTGCCTGCAAACTTGTTTGGGGCTTTATG 483 30 93.3 30 ............................AC TGGAATTCAGCAGTAAATAAGGGGTTAAGA 423 30 100.0 30 .............................. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 363 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 303 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 243 30 86.7 30 A......A.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 183 30 73.3 0 .......A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 78 30 95.2 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAA # Questionable array : NO Score: 5.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.20, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //