Array 1 131998-130116 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHOOJ010000007.1 Erysipelatoclostridium sp. DFI.2.3 NCFJOOAB_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ===================================== ================== 131997 34 100.0 36 .................................. AAAAAGATGACAACTGGAAGTGATACATTAGCAAAC 131927 34 100.0 36 .................................. CCTCATTATATATACAATTATATAAAGCTCCCGTAG 131857 34 100.0 36 .................................. TATTAACAGCCAAGACATTAGACGTATAATCATCCC 131787 34 100.0 33 .................................. AGCCTTGGGGGCTGTTATATGTAGGTCAGAATG 131720 34 100.0 33 .................................. ATCTTTCGCTTCTTTATAATTTCTTGCGTAACT 131653 34 100.0 35 .................................. ATCATCATTGGTACGCCCTCTCTTAGTAAATCCTC 131584 34 100.0 35 .................................. CTTTAAGCGCCGTTACTAATACGAACGCTTATATG 131515 34 100.0 34 .................................. CAAGGATGGTGTTATCAAAATGATGAGGATGATT 131447 34 100.0 34 .................................. ATTATTATATGAATTAATATATCACCTAATTTTA 131379 34 100.0 34 .................................. TTCTATTGTCTGGCAATCACAAATAACACGTTTA 131311 34 100.0 37 .................................. ATCCCGTATATCCTCACACCAGAAGTACATGATAAGG 131240 34 100.0 33 .................................. TTATCCTAGATAATGATAGAACATATCACATCG 131173 34 100.0 35 .................................. AGTAGGCTTGCTACACTGTCGTTCGTTTTCTCTAC 131104 34 100.0 37 .................................. GTTTGAAGTAGAGACGATAAAGCCTTTGAGTTTGAAA 131033 34 100.0 34 .................................. ATGTCTTCCGTAACTTTACTCTCTGGCAGTTTTG 130965 34 100.0 34 .................................. ATAATACTCCTCTAGATATTGACGCCCACGAACC 130897 34 100.0 33 .................................. ACCACTGCACACCAATGACCAGTTAACACCATT 130830 34 100.0 34 .................................. TATCAGATATTTAAAGATGATGACATGTGTGAAA 130762 34 97.1 35 ........................A......... TGTAGGCGCACCCTCACTACTTGTGGCCGGACCAG 130693 34 100.0 33 .................................. CTCCTTAGAAAGTGTAAAAAACAAACAGACAAC 130626 34 100.0 33 .................................. ACCTTTTCCGTATCCTTGAATGTGATTGACAGG 130559 34 100.0 34 .................................. TCTGCTTCAGGATCCGGAGCGGAGCCTGTCGTCG 130491 34 100.0 33 .................................. CATGAGGTCATTCAAGAAGTCAGCACTGAATAC 130424 34 100.0 35 .................................. ACATCAATTCCTGTACCGCCACGTATAATCTTTGC 130355 34 100.0 33 .................................. TTCCTTCGTCGGTTTTCGTTTCCCTGCCGCCAG 130288 34 97.1 37 ........................T......... TGAGATTTTAGAAATCATTGCAACTTACATTCCAGAC 130217 34 94.1 35 .C......................T......... TTCCAGCCTTTATCGACAATATGATCGAATTGTCC 130148 33 76.5 0 .C..........TT.A.......GC....-...C | ========== ====== ====== ====== ================================== ===================================== ================== 28 34 98.7 35 GTCAAGCTCTTTCGCGGAGCTTGTGGATCTAAAT # Left flank : ACTTGGTGCTATGTTAGGGGATCCTATTGTAAAGTCATACACGGCTTTCCCACTAGCCAGCATGTTTTGTTTTTCTTCATCAAGCCTGCTGAAAACACCTTCCGCAAGTAAATCCATTCGTTTGGAAAATTTCATATTCTCCCTCTTTCCTGATATTTCATATTTCTCTCATTATAAAAGAAAAGACCGGTCCCTTCAATAGCTGATGGGTGAATTTCACAACCTTCGTATGGTGTACACTAACAGATTCTAAAAACTGACCTCAATTACATTTTTGTTTAGCACTTTGTAAAGTTTCTGTTATAATAAAAGTAGAGATATCATATCCACTCACATGTTCTTTGCGCGAACCCCAAGCTCACATGATTTTCCAGGGAGGTTCGCGCCACATAATTGTGTTTTAAAACAAAATGTAACAATTTACAATAAAAGTACGATAGATAATTAAATGTAAATAATATTTTTTGTTACATTCGGAGTGGTTTATCACAAATCTCGCA # Right flank : AGCTCAGTACAGATTTTGCATTCCTACACACTACTTCCCATCCAATACCATTTGCAATCTCTCTCTAAACAGCGTACAATAAACACATAAAGTAAACGCTTACAGGAAGGAGATTTTTTATATGAAATATGTATGCGAAATATGCGGCTACATGTATGATGAAGCTGTTGAAGGCACCTCCTGGGTCAACCTTGATAGCACATGGAAATGCCCGCTATGCATCGCTCCAAAGGAATGCTTTAAAAAAGTAGCATCAGAGGAAGACGCGTCAGCTACATCCAAAAGCAACGATGCCACCTCCCTTGCCATACAGAAAAATGCCAAAAAGGAAGACACCCTGGAAACCAGCATGTCCCTCATTCATGAAATGGCTATTCACAACGCCAGCCGTATTGAAGCAATGCGCACACACAAATCCGTACCAGGATGGGACGACATCCTGCTATTAGGAGGACAACTCGCTCACCCGCCACTTGCTGATAAAGCTGATGTTGATACAA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAAGCTCTTTCGCGGAGCTTGTGGATCTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.94%AT] # Reference repeat match prediction: R [matched GTCAAGCTCTTTCGCGGAGCTTGTGGATCTAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.90,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 13529-11472 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHOOJ010000017.1 Erysipelatoclostridium sp. DFI.2.3 NCFJOOAB_17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 13528 33 100.0 34 ................................. TCATTATGCCCGTCCACGGTAAGGGCGTAAATCA 13461 33 100.0 34 ................................. GTACTGTCACCGGCTTAAAGTAATCATCCCACGT 13394 33 100.0 33 ................................. CAGCAATCTAGGTGCGTATCATGAATTTTTATG 13328 33 100.0 37 ................................. CTAACACCATCATAATCGGGATGTTATGCGAAAGCAC 13258 33 100.0 35 ................................. AAATTTTCTGCAGTCATTGTGGTGCAACAATTTAT 13190 33 100.0 35 ................................. ACCTAGATATTTTGTTGCCCTCTGTCCGTGATATT 13122 33 100.0 34 ................................. CCCCATTTTTAAATACAACTACATCACCAATATG 13055 33 100.0 36 ................................. CATGAAGCCAATAAGTGCGTCAACTTCGTTCGGTAG 12986 33 100.0 33 ................................. AGCAGTGGTTAGAACAAGGTCTAATTAAAATAG 12920 33 100.0 36 ................................. GGAAATGTTGGTGACAAAAAAGAAATAAAAGAAGTA 12851 33 100.0 34 ................................. TATCACATCATCACAGTGTATTGTGGTTATTGCC 12784 33 100.0 34 ................................. TGGTGTGGAGGTTTAATCGTCGCTTTGCTGATTG 12717 33 100.0 33 ................................. TAATTCATACTGTTCATCGTCTAATACGATAGT 12651 33 100.0 35 ................................. TTGTCAATCGGCGGAGCTGTTGACGAAATCGAAAT 12583 33 100.0 37 ................................. CACAATTAAAAAGGGTGAAGTAGTACAGTTAATGGCA 12513 33 100.0 35 ................................. ATATAAGGCATGGGTTGCTCAGAATCAAGGACAGT 12445 33 100.0 34 ................................. TCCTGTTATGAGCAGCCTTTTCGTATTGATTCCG 12378 33 100.0 34 ................................. TTAGGCTCCTGCCACATCTGCAATGCCACATTAT 12311 33 100.0 33 ................................. TTGAATACGGCAGCTTCTCTATGATCTCATCCA 12245 33 100.0 34 ................................. GTGGATATACAATGCGTAACCACTGGTTTCTGCG 12178 33 100.0 33 ................................. TGTTAGAATAGGGTATAGAAAAAGTATCGTCTT 12112 33 100.0 34 ................................. TACTAAGTGTATGTATGTGAGAGCTGTTTCTGAA 12045 33 100.0 35 ................................. CCAGCCATCCGCCAGCTCCAGCTCCGCCTCTGTAA 11977 33 100.0 34 ................................. AGTTGCTACTGCTTGTGATGGCGAAGCCCCCGTT 11910 33 100.0 34 ................................. GTCAATGCGAATCAACATGTTGTGACGCATTGGG 11843 33 100.0 36 ................................. ACCATACACAGAGAGCTTGCGGAATGCGTCCCTGCA 11774 33 100.0 35 ................................. ATTAACACTTCTTTTCCTTTCTTTCGCAGCTTTAC 11706 33 100.0 35 ................................. TCAAAACGGCGATGCTATCGTTCTGGTCGAACACA 11638 33 100.0 34 ................................. CTGTTTGGTAAGGTGCAAGATATAGTTATATCCG 11571 33 100.0 34 ................................. GTTCTCTTGATACCGCTTCTTGCTCCGCTATAGA 11504 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 31 33 100.0 34 GTCTAGCCTCTCCTGAGGCTAGTGGATCTAAAT # Left flank : TGAAGAAGGTGTTTTTCTGTTCACAACGAAGACCTGCCCAAATTGTAAAATAGCTGACACCTGGCTGAAAAGCGCTGGAATATCCTATGAAAAAGTGGATGCCGAGGAACAGGCTGAATTAACAAAAAAATTCTCAATTATGCAGGCACCAACGCTGGTCGTATGCAGAGATGGAAGCTGTGAAACATACAGTAATGCATCCAACATTCGTAAGTACATTGATATGATGCAGAAAGCATAAGCAAATAAGAGGATATATTTCATACTGGAATGTATCCTTTTTATGTATTTGGAATTTTTTCTGTTATAATAATAGTAGATGGTTATCCCGCTAAATAATCCAGCGCGAACCATAAGCTCACATGAATTCCCTGGGAGGTTCGCGCATCATTTTGTTCAAATTCACACAAATGTAACAATTTCAACAAAATTTTCATTAACCAAAGTTTTATATTTGTGTAAATTTGTTTCATTTAGGGGATTTCATGGGATTTTTCACG # Right flank : AATCCTTCTAATCAGGTGCTCACTAAGCGATACCCCCTAGTCTCTCCTTAGGCTCACAAACCAAATAATAAACAATACTCCAGTAATACTTTCTCATCACTTACCAGAAGGATTGCTATATGGAGTAAAATCAGGCACCTGTCCATTCACAATCTGTACAACCAACGGTATCTCCGTTTTCGTCTCCAGCTCTGACGTACTCAAAAAAGTTATAACCTGCGCATTCACCTTAACAACAAGTGATATTTTAATCATGGTGTTGTTGATTCCATATGGCTTTGATTCCGTTTTTATCTCTCCTGTAACATCATTCAGCATCCGCATACGCACTCTGATTTTCGGCCCCTTATCATATAAAAAGAAAATATGACTCAGATAACCTGCCGGTACTTCATACAAAACTCCATCCTCATAGAAGACATCCTTCGTCGTAGGATCCTTTTTACCATCCTGTGCAGCCAGCAGTGATTTATCAATCGTATTCAATGCCGAATACAACA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAGCCTCTCCTGAGGCTAGTGGATCTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: R [matched GTCTAGCCTCTCCTGAGGCTAGTGGATCTAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.10,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 229895-229396 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHOOJ010000002.1 Erysipelatoclostridium sp. DFI.2.3 NCFJOOAB_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 229894 32 100.0 34 ................................ TTATTAAATCGATAAAATTTGTGTTAAAGTAATC 229828 32 100.0 34 ................................ ACGCCACTTGTAGTAATGCTATAAGTGATAGGCG 229762 32 100.0 35 ................................ ATCAAATATAATGAGATTAACTTTATTATAATTTG 229695 32 100.0 35 ................................ CAATGCCAGAAAAGGAAGTTGAATCTTTGGCATCA 229628 32 100.0 33 ................................ AAATTTATCGCTTAATAAAACGACCCCTCCCCT 229563 32 100.0 36 ................................ TCATCGGCGTCCCATACAGCATTCTCGTATGCTTCG 229495 32 90.6 36 .....................C.T..C..... GTTTATTACATTGTCTTATGATACGGTATAAAAACA 229427 31 81.2 0 ..........G..........AC-....T..G | T [229416] ========== ====== ====== ====== ================================ ==================================== ================== 8 32 96.5 35 GTCTAGCCTCCCTGAGGCTAGTGGATTTAAAT # Left flank : ATTTACCTGAATATCCACCGTTTTTATGGAAGTAATGAGAAATGCTTGTTATAATAACTTATGATGTCAACACCCAAAACAGCGCAGGTAAAAAAAGATTAAGGAACGTTGCTAAAGTATGTGTGAATTATGGTCAAAGGGTTCAAAATTCAGTTTTTGAATGTGTTATGGATCAAGCGAAATGCAGAGAGGTTAAACACAAGCTTACTGGATTAATTGATAAAGAACATGATAGTTTAAGATTTTACTATTTAGGTAACAATTACAAAAATAAAGTAGAACATATAGGAGTTAAGCCTAGCTTCAATGTTGAAGAAGATGTATTGTTTATATGAATTATTTTGCGCGAACCGTAAGCTCACATGAAACCCTTGGGAGGTTCGCGCCTTAAAATTGCGTTTTATCGCATTTTGTAACAGCTTTTTCATGTCCATAACATTCAATAGTTATGAAAAGAAATGATTTTGTTACAAACGTCTTAAAATGCAATAATTTTCACT # Right flank : CTTAGACAAAAAAGCACAGCACTCCTTCTAATGCTGTATTTTATAAAATCCTACTTATTCTTCATATGTGATGTGACTTTAGTAAATCATTGAAACCTCCAAAAAAAACTTTATTTATCGTACTTTTGCAAGTGCCAAAAACTATATACCATTGAATATATCGTTTTCACGGAAAATTTAGTCTTTTATATGTGCCTATCTGTGAGGTGTAGTGTACCTGTATGTAATTGTATCGGATTACGAGTAATCCAACGAGGAAATGATAGAAGTGAGACACTGTACAAAAAGTTCCATCAATTCCTGTTTTGCAAGTGAATCAACGTTACTGCAAATTTATTAGCCATTTAAATCTGGATATTTTATTCTATAACGCATACAGTGATGAAGTACATGAAGGTTACATAAAAATATGTACAGAAAAAGAATATATTGATGTGTGTCTTCCTTTTTAAGTGCTTAAAAACTTAATGAGTGCAAAGCAGCATAAAGCTCCAATTGTA # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAGCCTCCCTGAGGCTAGTGGATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCTAGCCTCCCTGAGGCTAGTGGATTTAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-6.80,-6.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 272165-271471 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHOOJ010000002.1 Erysipelatoclostridium sp. DFI.2.3 NCFJOOAB_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 272164 32 100.0 34 ................................ AAATGTATTGCAAAAGATTACTTGTAATATATTT 272098 32 100.0 34 ................................ GCTTCCTCGAAATCATCGAGTACGGCACGTACAA 272032 32 100.0 34 ................................ TGCAAGCGTTACAACATTAAGCGCAGAAAAAAGA 271966 32 100.0 36 ................................ TGCTCAGTCTGTGTTTAATAGAATTAATACGATTTT 271898 32 100.0 33 ................................ CTACATGGGTTGACTTAGGAGAAAACGTCGAAA 271833 32 100.0 34 ................................ AATAATAAATTCGTCAAATATAATAAGGTTAACT 271767 32 100.0 33 ................................ ATCATAATTGGGGTGTGGCTGATGAATGGGCGT 271702 32 100.0 35 ................................ TTTTAGTTTATCTCCAAACATCATTATCACCACTT 271635 32 100.0 33 ................................ TCCTATCACTCCATTAAATTCTAACTCGCTACT 271570 32 100.0 36 ................................ ATGCAGGTTTGGATTTGGGTGTGAAATATGGATCGA 271502 32 96.9 0 .......................A........ | ========== ====== ====== ====== ================================ ==================================== ================== 11 32 99.7 34 GTCTAGCCTCCCTGAGGCTAGTGGATCTAAAT # Left flank : AATGCTCACAAATACGGATTCATTTTACGTTATCCCGAGAATAAAACAAATATAACAGGGACAGCAAATGAACCGTAGCATTTCCGTTATGTAGGAACTGAAGCCGCTACAGAAATGTACCGTAAAAATCTGTGTCTGGAAGAATATACACTGCAGCATGGTTTCTCATATCCCGTTTCAATAAAGCGCTGATAGCAAATGGATGATATTCATTATGAACCGTCCAGTTATTTTCCTATGAGGTCAATAAGATTTTTATTTCATACTGGAATGTATCCTTTTTATGTATTCGGAGTTTTTTCTGTTATAATACTAGTAGATGGTTATCCCATTAAATAATCCAGCGCGTACCATAAGCTCACATGAATTTCCTGGGAGGTTCGCGCATCATTTTGTTCAAATTCGCACAAATGTAACAATTTCAACGCAATTTTCATTAACCAAAGTTTTATAATTGTGTAAATTTGTTTCATTTAGGGGATTTCATGGGATTTTTCACG # Right flank : TTATTATAAGATTTCCCATTATCCTATGAAAAAATACGATTTCCTTTTGCCTGACAGTAACGCAAGATCATTACAGGCTTAAGAACATCGTATTTTTTAATTCATTTTGTTTATCCGCTCTTCTTTTCGAATGTGCGCTTTAGCTGTTCCATAAAAACAGCAAGGACAGCAATATCCGCAGGATTTACACCCGAAATACGGGAGGCCTGTCCCATCGTCAGAGGCTGTACCTTATTCAGCTTCTGTCTTGCCTCCAGTGACAGATTCACCACCTGATCATAGTCAAACCGCTCAGGCAGGCATACCTTGTCCATCGCCCGCAGATGTTCCGCATCACGCTTGGCTTTTTTTATGTATCCCTCGTAGCGAATCTCGATTTCCACAAGCTTCGCAATCGCAGGATCAAATTCGCGTTCCAGATAGGGCTCTAAAAGTGCGATGGTAATTCCCGGTCGCTTCAGCAGCTCTGCAGCACTGATCCCCTCCTTCAGCACATCCAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAGCCTCCCTGAGGCTAGTGGATCTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTAGCCTCCCTGAGGCTAGTGGATCTAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-6.80,-6.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //