Array 1 195557-190491 **** Predicted by CRISPRDetect 2.4 *** >NZ_RSDB01000032.1 Bifidobacterium animalis subsp. animalis strain 2006B Contig_32, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ========================================================================================== ================== 195556 33 100.0 35 ................................. AGTCCCGGCGCTGTCAGCGAGACTCTTTTGCTTGG 195488 33 100.0 34 ................................. GACCTCGCGCCGGTCACGGACTGCGGACGGGGAG 195421 33 100.0 34 ................................. ACCCTACGCGAATCGCCTGCAGCGTCTCATGCAG 195354 33 100.0 33 ................................. AAGAACACTCTGAAATTCGCCGGACTCGACACG 195288 33 100.0 35 ................................. ACCAAGGCGACCGTCAATGTCCTGCCGCGTTGTTC 195220 33 100.0 33 ................................. GCCTTGCTGCCGAGCACATGGGCGAGCTCCTCG 195154 33 100.0 33 ................................. CGAGACGCCCAGTTGTTGACGCGCTTGCGTGTC 195088 33 100.0 33 ................................. CTCCATGGTGCGCGCGGCCTCCTTGGAGGGGCC G [195075] 195021 33 100.0 35 ................................. GGGTACACGGTAGCGAACCGGCTCCTCCCATCTAT 194953 33 100.0 34 ................................. TCAGCTGTTTCGTACTGATTCGGTGTTGCCGTCG 194886 33 100.0 35 ................................. GTCACCGAGAGCGAGGAACGGTTGCCCATTCGCCT 194818 33 100.0 33 ................................. ACATACGGGGCAATCCAACGACGCCGCCGCTCG 194752 33 100.0 33 ................................. TGCAGGCCGCTCAGATACGACTGGCCTATGGTC 194686 33 100.0 35 ................................. ATCTTACCGTGCCCGCATTATCGCCCGAACACAAG 194618 33 100.0 35 ................................. ATGTATGAAAACAAGTTAGAGGGGTCAGGCGTTGC 194550 33 100.0 35 ................................. AATAGTTTTGACAAACTCGACACCACACGATATAC 194482 33 100.0 34 ................................. AATGCTGGGGCGGCTCAAGCATTGATAAAGATAC 194415 33 100.0 36 ................................. CTATTGAATAAAACACGTATAGACGGCACGATACGG 194346 33 100.0 34 ................................. ATCCAAGCGGTGAACGGCTACTATTTCTCCGGCC 194279 33 97.0 35 .....T........................... TGCGATTGTGTCTGGCAAGAGCGAGGTTGACGCCA 194211 33 100.0 35 ................................. CGCATTCTGGCGGTAATTTCGTCGCCTACGGGGCA 194143 33 100.0 38 ................................. GCGGAGGGAAGCTTACTGGAAAGAACCAGAGCGTACAG 194072 33 100.0 35 ................................. TTTTACAAGCCAGTCTGATTGCCAGGACGAATGCA 194004 33 100.0 35 ................................. CCCGACGACATCGACAACACCAAAGCGAAGCGCAT 193936 33 100.0 33 ................................. ACATTGACCGGATCCTGAGCACGCTCAAACGCG 193870 33 100.0 35 ................................. GACGATTGACGTGTGGGCGGTCGCGCTCGATAACG 193802 33 100.0 35 ................................. TCCACGACGAACGGCGTGGGCAAATCGTATATCGG 193734 33 100.0 33 ................................. GGTTACCGTGTGATTCGGCAGCATCCAGCAATC 193668 33 100.0 34 ................................. CCGACCCGCGTGACGAATGGGAGAACCTGTGATG 193601 33 100.0 35 ................................. CGTGTCATGCTGCGGGACGGCACCAACCTGGAAGT 193533 33 100.0 33 ................................. GACACGGCCATCACCAATGCCATGCCGGACATG 193467 33 100.0 34 ................................. GAATCAAAAGCAACCACAGTGCCACACGGGTACG 193400 33 100.0 35 ................................. CAGCGGCGAAAAGGTTGGCGACGTGCGTAGGCACG 193332 33 100.0 36 ................................. GATGACGAGTCGGCTCCGTGTGTCTGTGTGGCGCAT 193263 33 100.0 33 ................................. GTTTCGGCCGCGTGGTTGCGGCCTGTCCTTGAA 193197 33 100.0 34 ................................. CAGTAATTCGATGTGCTCGAATCATTTTCGAGCA 193130 33 100.0 36 ................................. ACATACGGGGCAATCCAACGACGCCGCCGCTCGCTA 193061 33 100.0 32 ................................. ACCACGCAGGAGATCTATAATCCAGCGGGCAT 192996 33 100.0 36 ................................. TTGATGCCGTCCCACAGGGCCGTGAAGAAATCACTC 192927 33 100.0 33 ................................. ACGATGGAAAACAAGACGGCGCCGGTGCCGTGG 192861 33 100.0 36 ................................. TTCTGGCCCTCGGCGACGACCTCGGCTTCGGCGGCG 192792 33 100.0 34 ................................. ATCGAGGGCGCGTTCGACGCGGCATTGGCCAACG 192725 33 100.0 34 ................................. TCCCGCACCCTCACCTCACGCGGCTTCCCCGTCG 192658 33 100.0 33 ................................. CTGTCGAAGGGCCTGCAATGGTGTGATGCCATT 192592 33 100.0 34 ................................. ACCCCGAATGCACAGGGATTGACGGTTTCGGTCA 192525 33 100.0 35 ................................. TGAATCCGCTCAAGGATCGACTCAGGCGCGTGTGC 192457 33 100.0 34 ................................. GTCTCCAGCCATTTCGCCGCCACATCAGCAAACC 192390 33 100.0 34 ................................. GTTCACCTTTTCGGAAATCTACAAAATAGCCGAA 192323 33 100.0 35 ................................. AATCAGCTCCTTGGTTGTTGTGGCGTTTGCTTGAT 192255 33 100.0 34 ................................. CGACGGCAGGCGCATCGATTCCGTGCGTCACAGC 192188 33 100.0 34 ................................. CATGTGACCACGAGGGCGATGATGCTCGCCCCTG 192121 33 100.0 36 ................................. ACGTTGAAGGTGATTTCCTGTACCTGTTCGTGTCGA 192052 33 100.0 32 ................................. CTGTACGACACGATGAGCGGCCTGCTCGCCCA 191987 33 100.0 34 ................................. TCGGCCATGACGAGGTCACGCTCACACCGACGGT 191920 33 100.0 35 ................................. AAACCAGTACGCAACACGATCGAGGAGAAGGAAGA 191852 33 100.0 35 ................................. CAGCGCGAACACGAACGCGATGATGGCGCCTGGAT 191784 33 100.0 35 ................................. GTCGAATGTGCACGAAATGTTTTGAATCGCGGCCG 191716 33 100.0 34 ................................. TTGACGAGCCCGGCGGGCATGCGCTGGCGTGGCG 191649 33 100.0 34 ................................. ATTCGCCTGCCCGACGGCGGCAGGATCGACCCGG 191582 33 97.0 34 ......C.......................... GAAGTCGACGCCGCCATCAGCGAGCTCTTCGCCC 191515 33 97.0 34 ...G............................. ATGTCGCATGGTGTCCCGTGGCGTGAGGTGCGTG 191448 33 100.0 34 ................................. CACGCAAGCAAAGGCAGGTCATACGACGAGTATC 191381 33 100.0 34 ................................. GTGTATGTGGAGGCGATCCATGGGCGGCGATGCC 191314 33 100.0 33 ................................. GATGACGACTGGCTCACCGTGGTAGTAGATGTT 191248 33 100.0 33 ................................. GATGACGACTGGCTCACCGTGGTAGTAGATGTT 191182 33 100.0 35 ................................. TTTCTTGGCCCACGGTACTTGTTGTTCCACTGGTT 191114 33 100.0 35 ................................. ACGCTGATAGGGGCAACACTATGCGCCGTCAGCCT 191046 33 100.0 32 ................................. TTTGGAGCCGGGCCGTCGCATATCGTACGAAG 190981 33 97.0 34 .........................G....... CGCCAATACGGCAAATGGTTGGACGAGGGCCTCG 190914 33 97.0 33 .........................G....... AAACCGGATTACATCGTGTGCGACGGTGAGATT 190848 33 97.0 34 ..........C...................... AGACCTGCCGCAAGGCCGGCGTCGATCTTGAGAA 190781 33 97.0 35 ........T........................ AACAAGGCATTGGCTGACCTCGGCATGACCGACGT 190713 33 97.0 34 ........T........................ TTTGCAGGACACGGCCGACCAGACCACCACGCAC 190646 33 93.9 90 ........T......A................. CTGACCTCACACCTCGCAGCGCACACGCTCCTGAGTCACCTTTCTTCGGATGAAATCGGCGCAATCGCACTGCCGGGCACCGACGGCGTG 190523 33 90.9 0 ........T..............AC........ | ========== ====== ====== ====== ================================= ========================================================================================== ================== 75 33 99.5 35 GTCACCTCCCTTCGGGGAGGTGTGGATTGAAAT # Left flank : TCGCCAAGACTTGCATGCGATTCGGACAACGAGTGCAGAACAGCGTGTTTGAGTGTTCGATTGCACCATCCGATTACTTGATGCTGGTTTCGAACTTGCTGGAGATTATCGATGAGGAGATGGATAATCTGCGCATCTACAAACTCGGCAAGAATTATGCGAGTAAAATCGAGAGCTATGGACATGACAGACATGTGCCATTCGATGATGTCATGATGATTTGAGAACACAGGCGTTTGTGGATTGAACGTGCATGGTGGTGCGAAGGGTATGCTGCCATGATTTCGTCGTAGGTTCGCACCGACAAGAGTGCCTCTACGCTGGTATTCTTTTCCGCATTGATCGGAATGCCGTTTGATAATTCAACAGTGTTTCCATATTTCAGGTTCAGCTTTGAGATTTGTATGCCGTGCACCTTCCGGTAAAGGTTTTCTGAGGTAAGATTTGGGTTGGAAGTGGGCATGACGTCCGGAATGCGGACTTCGATGTTCACTTTTGCA # Right flank : AGCAAGCAGATGCGAACCCATCGGTTGAACTCATGAGTATTTTGCAAAATCGGTATTTTGGTTTTGGATGGTGTAGAAAAATACCGAGGAGAGCCATTCCGGGTGCTTCGACGTCACCAAGTGCAATCTGTGCTCTTCACTGGCTACGACAATACGTTGAGAAAATAGTGAAAGCGATTCCCGAGAGCCAAAAACGGGTTCGGGGGAAACCGCTCAAAAAAGTTTACCGCGATCAGCCGGATATCTAAGCTAGTACAAAAGGAATGGTTTGCCCCGCATAAGCGGGGATGATCCGGCCCTACAACGAGTCGTACAACTCTACAACAGAGCCTCCAAGAAACGAGCGCAACAATGAACACGCCAATGAACCCACCAATGAGATTCAGAAAATACTACCTGCCAGCCGACAAGGAAACCGCCTTGTTACCAACATGCGTGCCCGGCGCAAAACCGGAACCACTACTGATCCCCGAATACCTGTTCGACAACACCGAAGAAGA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCTCCCTTCGGGGAGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [8-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : NA //