Array 1 10061-9303 **** Predicted by CRISPRDetect 2.4 *** >NZ_PPBW01000055.1 Campylobacter concisus strain AAUH-15UCdp 1098896, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 10060 30 100.0 37 .............................. GGCGATGGGCTTTATGTCGTAAATTTTAGCGGCCAAC 9993 30 100.0 37 .............................. CCCCTTTTGTATCGGCTGCTCATTGCCCTCATACGCG 9926 30 100.0 34 .............................. CTAAGATAGATAAAAGCTTAGAACAAGTAACATT 9862 30 100.0 38 .............................. GCTAAAGTTTGCTGACATTGAAATATCAAGCAAATTTC 9794 30 100.0 34 .............................. TTATTAGCTCTAGTGGGCTACGCTTTACTACTTT 9730 30 100.0 37 .............................. GATATAGGAGATGAAAAATGAACTACACACAAGCTTT 9663 30 100.0 35 .............................. ATCGCCATTAGATATAAAATTCATAATAGCAGCAT 9598 30 100.0 36 .............................. TAAGATTATCAATAATCTTATACTGGCTTTCAGTGG 9532 30 100.0 37 .............................. ATTTTTATGCTGGTTCTTTGCGTGGTTATTTTTGGAA 9465 30 96.7 37 ...................C.......... TCGCCATTTAAAGCACCCCTAAAACAGCCATTTAACG 9398 30 100.0 36 .............................. ATGTTGTATCCGCCCTATCGTTATTTAATGAAAATA 9332 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 12 30 99.7 36 GTTTCAAACTCCAACGGAGTAAATTCTAAT # Left flank : AAAAGATGAGATGAAAGAAAAAATCTCTGATAAAAAAGATAAATTTAAAAAGAAAGCTTCTAAAACCAAAGAAGAGCTAACTTCTAACAAAGAAGATGAAACTAGCATAAGTGAAAAAGCAAAAGATGAAAAAGATAAGGTTGTTGATAAAATAAAAGAAAAGAAAGAAAAAGCTGCTTCAAAAGCTAAATCTAAAAAAGAAAAACTTAAAGAAAAACTAGAGAAATAAAACATTTTAAAACCTGCTTATCTTTACAAGTGGGTTTTATAAATTCATATATTTTTTTGTTTTAATTATAATTGACAAAAGTTTTCATAATTTTCTTAAAATTTCATTGATCTGATAATTTGCTTCATTTTTATCTTTGGTCAAGACGTTTTTCTAAATTGTGTCAAAATAGCTACCATCTAACTTTGCCAACTAAAAATTTATATGGAACTGTCCCGAAAAAACGACTATCAAAAGAGTGATTGCGGTTATCATCAATCATGTTCGGTGA # Right flank : AGCGCCAAAAAGCCTATTTTATAGGCATTCTAGTGCAAGAAGTCTATATTTTTTCGCCTTAAATTTGACTAAAATTTAGCCATGTGTAAATACGCAAAGCCCTAAATTTCAAGCTTTTTAAAATCTTAAAAAACGCTTTATTAAAATGCGATTTCACTCCCACCTAAAGCCTTCATAAGGCGCGTCCTCGCAGATGCACTTTTTAAGCTTATTCGCTTCGCGGCGGATCACCTGCCTCCACGTTAGCTCCCTGCCACCCACCGTGAGCGTCTCGCAAAGGTGTGAGATCATTTTTAGCTCGATCTTTTACACGGCGTCATTGCTAAATTTTATCCTACCAGCGTCCGTTTGGAAGTCCTTTGCGGTGATCTCCTTTTTATTTAGCATATTAAATATAAGCGTATCGCCCAAGATCGGCTTAAAAATCTCCGCTAGATCGAGGTGAAGGCTTAGCGCGCGGTAGTTTGGCTCGTGTAAAAAGCCGATGCGAGGATCAAGCT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAAACTCCAACGGAGTAAATTCTAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //