Array 1 15169-16397 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIXM01000008.1 Vibrio sp. PID17_43 contig_8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ====================================== ================== 15169 35 100.0 34 ................................... CAGTTCCTCCTAGAACGAAAACCGTAAAGATCAG 15238 35 100.0 34 ................................... TTACGCTCGCAACCTGTTTTGACAGTTGTTTTTT 15307 35 100.0 35 ................................... CTTGAGTCCGCGTGTAGCACCATGGAGTTTGCAAC 15377 35 100.0 35 ................................... CACTTCAATTGGGTAGGCTGGATCAAGCCAAACCT 15447 35 100.0 37 ................................... ACTCAAAAATCAATTCAGAGTAGTGCTCAGGTAGCGG 15519 35 100.0 35 ................................... CTATTGCCATCGGACTAAATTCAAACTCAACTTCA 15589 35 100.0 37 ................................... TATTGTGAAAGTACCGACTCTAATTGAGCAATCAGGC 15661 35 100.0 33 ................................... TCATAAAATCACGGTTACGGTAGTCAATGACGC 15729 35 100.0 33 ................................... AGATTTGCCGTTGATAGTTGCGTTAAGGATACG 15797 35 100.0 35 ................................... GAACGTGCCGTTTTTAATGGCCGTATCCATAGAGA 15867 35 100.0 35 ................................... ACATGGGCAATTGTACATTGTTCAAGTGCTGCCAT 15937 35 100.0 35 ................................... TATCATAAGCATGTTGGATCTCCTCAGCTATGGAG 16007 35 100.0 36 ................................... AGATCTTTTGATGTAGTACAAGACAGATTCTGGCAT 16078 35 100.0 35 ................................... TTACTATAAGCTTCCTCAAATTTTGTGATACCTCT 16148 35 100.0 38 ................................... TTACTGCCTCTGGCAGGTTAATTATCGTTTTCATGATT 16221 35 100.0 36 ................................... TGTTAGCAATCTGCTCACAAACCCTTTTCACAACAT 16292 35 100.0 36 ................................... ATACGTTTTTCAAGTTCTGAGTATGAACGCGCTGTT 16363 35 85.7 0 ............................GG.G.TG | ========== ====== ====== ====== =================================== ====================================== ================== 18 35 99.2 35 CTATTAAGACTGCCCGGTTTAGACGGGATTAAGAC # Left flank : TGCTTGGCAAAGTACCCCTTATGAATATATTGATGGGTAAGGCGCATAATGATCTGGCTAGTCAGTTTCGACATCAGTGATAATAAACGCCGCAGGCGAGCGGTTAAAACGATACTTGGCTATGGTAACCGAGTACAATACAGCGTATTTGAATGCTTGTTAAGACGGAAAGAACTGCGTCGTTTACAGCGCCAATTGAAGCACATCATCGAACCAACAGATCGAGTGCTGTACTACCCGCTGTGCGGAAAGGATGTATTAACGCGTTATGCTGATGGGCAGGGTGAAGTGCACTGGCCAGATGCATTACACATCATTGATGAATAATACGCTATTTTGAAGCACACCATGAAAAACAATACATTAGTTCATTTTGCACTAATCTAAAATCCACCCACATGATTTAATATGCTACAATGCAACATAATTAGTCAGACATTGACATTTTTGCAGCACAGCCCCCTCAGAGAGCTTGCAACATAAGGGCTGTAGCGACTAGA # Right flank : GTACTAGCTCATCAAACCTTGTTTGCATTTTTCAATTTCTAGGCTAAATTTACTAAACTTATTTCATAAGAAAGCACGTTAAACTGGCCTCCTAGAGTCGGCGTCTAAGGGACGAGCAACAACAAAGGTTAGTGCAGTACAATTTAGGGGGAAGGTAGCAATGCGTTGGTTTGTTTCTCGCCATGTGGGGGCTATCAATTGGATTAAATCGACCAATACCTATATTGATCGCTTTGTTGATCATCTTGATATTGAAGACATCAATGCCGGAGATATTGTGTATGGCACTTTGCCCGTCCATCTTGCGGCAGAGGTCTGCAAGCGTGACGCTCGCTACTTTCATCTTATTCTAGACATGCCAGAACACTTACGAGGCCAAGAATTAGATGCAAAACAGTTGGAAAAAGCGCATGTGAGAATGCAGGAGTTCAATATTCAACCACTTTAAAGATAGGTCTCGAGCTTTGAATATTCTTATATCACCTTACCCCGCTTTAAAA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTATTAAGACTGCCCGGTTTAGACGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.80,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //