Array 1 8887-7394 **** Predicted by CRISPRDetect 2.4 *** >NZ_JXOD01000314.1 Methylobacterium platani JCM 14648 contig_314, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8886 29 100.0 32 ............................. CCCGGCAGCGCAGCGTAGGGCAGCGCGGCGTG 8825 29 100.0 32 ............................. TGGGCGCCGCCATCGCTTCTCACGAGCGCGCC 8764 29 100.0 32 ............................. AGATCGATCTGAGCAGGGCGGCGGGTCATGCG 8703 29 100.0 32 ............................. GTCAATCGCGAGAGGACCCTCCGCCGCCAGGA 8642 29 100.0 32 ............................. CTCGTCTGTGGATCCTAGGGGGGTTCCAGCCG 8581 29 100.0 32 ............................. CCGGCGAGCGGGCCGCTACCGGTGATGAGCGC 8520 29 100.0 32 ............................. GCATTGATGAGCTTATCCGGGCCGATGACCCC 8459 29 100.0 32 ............................. CTTGGACGCCGTGGCCCGGCCGGCAAGACCAC 8398 29 100.0 32 ............................. GAGCGGAAACGAAACGGGCCCGCCGGATGAGG 8337 29 100.0 32 ............................. AGACAGCGCCATGATCATCACGCATCTCCCGT 8276 29 100.0 32 ............................. CACGCCTCGCCGGGGATCGAGCAATTCCGCAA 8215 29 100.0 32 ............................. TCCCGCGTCCGGCCCGCTCGCCCTCTCGCCCC 8154 29 100.0 32 ............................. TTCGTGAGCGCCAACGACGTCATCCACCTCTA 8093 29 100.0 32 ............................. ACCTTGGGCGGCGCGCCGTCCGGGCAGCAGGA 8032 29 100.0 32 ............................. GCGCTGCAGGCCGCGATCGGCGTCACGGCCGA 7971 29 89.7 32 ..........................TGC GAAATCGTAGTGGGGCCCCTGACCTACGAGGA 7910 29 100.0 32 ............................. CGCCGCGAGGCCCGCGCGGTCGATGCCGGCTG 7849 29 96.6 32 ............................T TCGTTGTCGGCGCGGATCTCCGCGTCGAGCAC 7788 29 100.0 32 ............................. CACATGCTCGAGGAGCTCCTGTCGCATTCCGG 7727 29 96.6 32 ............................A CCCCTCTCGCGCGCCTTCGACCTCACGGTCGC 7666 29 100.0 32 ............................. CCACCGACGTGAACGGCGTGCAGATCTTCGGT 7605 29 96.6 32 ............................T TTTAGGAATTGCTGCGGACGGCATCTACCGGT 7544 29 100.0 32 ............................. CTGTTCGAATGAGCGCCCGGCGCGGCCTCCCC 7483 29 100.0 32 ............................. ATCCTCTACCGCCTGCGCGCCGACGGCCGCCG 7422 29 89.7 0 ........................GC..A | ========== ====== ====== ====== ============================= ================================ ================== 25 29 98.8 32 GTGTTCCCCGCAGGCGCGGGGATGAACCG # Left flank : ATGCCCAGCGACAGTAGTCGACGGACCGCGCCGCCTCGGTGCCGCCCCGCGTGACCCGCGCCTGATCGCTGATCGGGCTCGCCCGCGACCGGCGCCGATGCGGCCGGTCGAACGAGGTGAGCCATGACCCTGATGACGATGCGCGCCCGCTCCGGCGCCGCACCCCGCGACCGCAGCGTCGTGGTCGTTCTGCTTCTGATGCTGGCCCTGGTCTTCGGACCCGCCATCGGCCTCCACGTGGCCGTCAACCTGCTCGGCCCCGGACCGTCGCCGGACGGCCTCGCCGCGACCGCCACGGACGCGCCCAGGGGCGCCCGGGGCTGACCAAGGGCGCCCGGGGCTGACGGGGAACGGCCGCTTCCCGGGCCGCCGGAAACCCGCTACCCCTTGCCCGGACCCGATTTCCGAAGGGCCTCGCGCTCGTTCGGGAACGGAGCGGAAACACCGGTGCGCTCTTCGACATCGTGAAATGCGAGCCGGATCAACGGCTTCCCGGAAGA # Right flank : TAACCAAGCCGTTGTGAGCGGTCGGGTCCAAGCCGTCCCCGTGGCGTGGTGGGAGCAAATAGACCCCGCCCCACCACCTTCCCGCGCCCGCCGAAACCCGCTACCCCTCGGGCCCATGCCGACCCAATCCTCCTCCGCCGCCCCTGCCCCCGTCACCGTGACGGCCGGTGCCGTCCGCTTCGGCAACCACCTGCCGCTGAGCCTGATCGCCGGGCCCTGCGCCCTGGAGAGCCGGGACCACGCCCTCGAGGTCGCGGGCGCCCTCAAGGCGATGGCGGCCGCCCTCGGGATCGGCCTCGTCTTCAAGTCCTCGTTCGACAAGGCCAACCGCACCTCGGCCGGGTCGAGCCGCGGCCTCGGCCTCGCCCAGGCGCTGCCGATCTTCGCGGAGATCCGCGAATCCCTGGGCCTGCCGGTCGTCACCGACGTGCACGCGGCCGAGCACTGCGCCGCGGCGGCCGAGGCCGTCGACGTGCTGCAGATCCCGGCCTTCCTGTGCC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAGGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCAGGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 2992-2415 **** Predicted by CRISPRDetect 2.4 *** >NZ_JXOD01000058.1 Methylobacterium platani JCM 14648 contig_58, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2991 28 100.0 33 ............................ CGCTACACGCTCAAGGATCGCGAGCTCTGGCGC 2930 28 100.0 33 ............................ CGACCGCATCGACCCGCCGATCGACTGGCGCGA 2869 28 100.0 33 ............................ TGGAATGGTGGGTTGATGACCATCAGCCGACCA 2808 28 100.0 33 ............................ CCCGAAGGGTGCCGAACCGCTCTCGCCGGCGGT 2747 28 100.0 33 ............................ CATATCGTATAGTTTCGAGATGTCGGCTTCGAT 2686 28 100.0 33 ............................ CGCCGAGAGCCTCACCGGGGCCGGCCAGCGCCG 2625 28 100.0 33 ............................ CGTCGAGGAGATCGCTCACACGCTCTCCGATGC 2564 28 100.0 33 ............................ CGCCATCGCTGCGGCTCACGCCCGGCAGAATGC 2503 28 96.4 33 ...................A........ GCCGCGGTTTACCGACCGCAAGTTCTATAAAAC 2442 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 10 28 99.6 33 GGCTCCCCCGCCTACGCGGGGATCGACC # Left flank : AGGCCGCGAAGGCGCACGAGAAGCGCCCCACCGACCCGATCGAGCGCCTGGCGCGCCGGACGGTCGCCGAGCGGCTTCGCCGCGACGGCGTGATCCCGGCCATGATCGACCGCATCAAGACCCTGTTCGAGGACGATGCGCGATGACGCATCGGTGCCCCCCATGCCCATGACCGTGGTGGTGACGCGGGACGTCGCCGACCGCTTCCGCGGCTTCCTGTCCTCCGTCATGCCGGAGGCTGCACCGGGCGTCTTCGTCGGCGCCGAACTCTCCAAGGGCGTTCGCGAGCGGATCTGGACCGTGCTGTCGGAGTGGTGGGTGGACATGCCGGGCGGCTCGATCGTGCTGCTCTGGAAGGATGACGCCGCGCCCGGGCGTCTCGGTCTCCGCACGCTCGGCCTACCCCCTCGAACCCTCGCGGACCTCGACGGCGCGCTTCTCGTCCGCCGGTAGCGACGATCTTTGACATCGTTAACAGTGCCAGCTACTTAGCAGGCAGA # Right flank : TTGCTGCGCGACCTCCGTGGCGCGGAACTCGATGGCTCCGGCGGGCGCGATCGCGCTGCTCTTCGCCGTCGAACGGCGCTCGAGCGCCCAGGACCTGGCGGCGCCGGCCGCGCGCGTCCACCGGGGCGAACGTCGGCTCTCGGCCGGCTGGGACCATGGCCGATGATCGCCCCCAGATCAACGCATCGCGCAGCTCGCCCGCCGCGAGGCGGAGCCGAAGGCCGAGCGTGCGGCGCTCGCGTACTGCGACGACTTCGCCTACCAGGGCGCGCAGATGCGCCGGGTGGACGCCGAGCTGCAGGTGATCCGGTGCCGCCGCTCCGCCATCCAGGCGGAGCAGGAGCGCGGGGTCTACCTGCCCTTGACGCGGGGAGCGGCGGCATGATGCCGGGACAGGCCGCGTTCTGGCTGATGCTGCAGCGGCAGCACTGGAACGGCATGGAGGTCCGGCTCGGCCGCGGAACCCTTGCCGCTCGGGAAGCCGATCGAGACGCTGCCTG # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCCTACGCGGGGATCGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA // Array 1 27372-25208 **** Predicted by CRISPRDetect 2.4 *** >NZ_JXOD01000089.1 Methylobacterium platani JCM 14648 contig_89, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 27371 29 100.0 32 ............................. GCCATCTCGGCAGTTGAGGTAGGGATGATATC 27310 29 100.0 32 ............................. ACCGAGGCCTGATTGGCGGCGCCGACCGCGAC 27249 29 100.0 32 ............................. GTCGCCGAGGCGTTCCAGCAGGTCGTTTCCGA 27188 29 100.0 32 ............................. CGAGCGCATGAAGTCGCGCCGCTTGTTGATCT 27127 29 100.0 32 ............................. GTAGCGCCGCTTTACCGCCAGCGGTTCTGGGA 27066 29 100.0 32 ............................. ACAGCAGTCTTGCCGGGCTCCACCGTCGTACG 27005 29 100.0 32 ............................. GCCAGGGCGAGCCGGCGCATCACTTGAACACC 26944 29 100.0 32 ............................. CACTGTGATGTCGGCGCCCCGTACCTCTCAGG 26883 29 100.0 32 ............................. CTGATGGAGGCCGGCACCGGGTAGGGCATGCC 26822 29 100.0 32 ............................. TCGACGAAAAACTTCATGAGGTCGACTTTCGA 26761 29 100.0 32 ............................. TTCCAGGCCGAGACCTTCATCCTGCACGTCCC 26700 29 100.0 32 ............................. AGGCCGGCCTGCCCCTGACGTGCGCCGGGGAT 26639 29 100.0 32 ............................. ATGATCGGTATGAGATCGAATGGCTCGGCCAC 26578 29 100.0 32 ............................. CGGTGTGCGGTACATTTCGCAGTATTACGCCA 26517 29 100.0 32 ............................. GGCGGCGGCATTTCCATCGACAGCGCTATGTC 26456 29 100.0 32 ............................. ACGGAGTGACCGCCATGGCAAACGTCAGCCAT 26395 29 100.0 32 ............................. GCCAGACGGCCCAGGCGAGCACACCGAATATA 26334 29 100.0 32 ............................. GTGCCGCCGGAAATCTGAAACCCGTTTCCAGC 26273 29 100.0 32 ............................. GTAGCACCGATCTACCGCCGCAACTACTGGGA 26212 29 100.0 32 ............................. GTGCGCGTGTGCATCGGCCAGAAACCCGTAAC 26151 29 100.0 32 ............................. ATCGGGGCCTGCTGGATGTAGCTCTGGATCCG 26090 29 100.0 32 ............................. CCGTGCACGGTCACGACGAGACTGCCGTCGGG 26029 29 100.0 32 ............................. CCCTCATCGCCGGCATGGGCGCTCGCTTCGTG 25968 29 100.0 32 ............................. AGCGCTCCGGCGGTCGCCTCCTACGACCTCGT 25907 29 100.0 32 ............................. TTCGCGACCGGGCTCGCGAGCCAGGATTACGG 25846 29 100.0 32 ............................. ATCGAGGCTGGCCGCCAGACCGACGATTGGGA 25785 29 100.0 32 ............................. CACATGCAGTCCCTTACCGAGGACCAGACCAA 25724 29 100.0 32 ............................. GCGCTCCGCAACACGTCGGTGCTCCGGGCCGT 25663 29 100.0 32 ............................. ATCGACGGGCACGGCAGCGACCAGTCGATGAT 25602 29 100.0 32 ............................. TCAGCTCCGCCGATTATCGAGAGCAATTCGAC 25541 29 100.0 32 ............................. ACCTGCAGCGCCGGCATGGACGACAGCAGGGG 25480 29 100.0 32 ............................. GCCGTGTCCTACGAGGTCGACCTCGGGCACCT 25419 29 100.0 32 ............................. CCGTTCGAGACGATCGCGAACCGAGCGATCGT 25358 29 100.0 32 ............................. GTGCCAGTTCCAGATCAGCGGGGCGTTGGGCT 25297 29 100.0 32 ............................. CCCCGCTACGGGCGGTTCGCCGGGCCGATGAC 25236 29 75.9 0 ...........CCA...A....C.G...T | ========== ====== ====== ====== ============================= ================================ ================== 36 29 99.3 32 GTGTTCCCCGCAGGCGCGGGGATGAACCG # Left flank : GAGCATCGAGGACGTGCTGGCCGCCGGCGGCCTGCCGCCCCCGGGCGAGCCCGCCGACGCGCAACCCCCCGCCTTCACCGAGACCCCGTCCGGCGACGGGGGGCATCGCGGATGAGGGTATCGCGCGGATGATGGTCGTGGTGGTCGAGAACGCGCCGCCGCGCCTGCGCGGCCGCCTCGCGGTCTGGCTCGTCGAGGTGCGGGCGGGCGTCTATGTCGGCCAGTATTCCCGCCGCACCCGCGAGCGGATCTGGGCCGAGGTCCAGGCCGCCATCGGCGACGGCAACGGCGTCATCGCCTGGACCGCCCAGACCGATATCGGCTACGCCTTCGATACCTGCGGCCGGAACCGCCGCATGCCGGTCGACCTCGACGGCCTCCCCCTGGTCGCCTTCCACCCCGACGAGACGCCGCTCTGACCGGCTCCGGAACGGAGCGGAAACGTCGGTGCGTTCTTTGACATCGTGAAAGGTGAAGCGTATCAAGCACTTCTGGGAAGG # Right flank : TGCCAGCCGCTTCGCCCCCCTGCTAGACCTCCGCCCGCGAGACTCGATCTAACCAATTGATTTCATTGACGATGCCGAGGCCGGTGCGCGCCGGTGCCCGGCATCGGGAGGCGCGAGGACCGGTGACAGCCCAGACCCCCCTACCGGCGCCGGCCCCCGTCGCGCCCCTGCGCGCGTCGCTGCGGCTCGGGCGCGGGCGCGTGGTGACGCGGGACTTCGCCCGCCTCCGGCTCGACTTCGGGGTCGAGGGCCTGAGCCTCGACGTGGCGGATCTCGGGCTCGGCGGGCGCTGGGTCTCCATCGCCTTCAAGGACGAGAACCACGGCGCCTTCTGCCGGGTCGAGCTCACGGCGGTCGCGGACGGGGCGGAGGGCACCAGCCTGTCGGAGCGCGCCTTCGGGCACGGGCGCTTCACCTGGCTCGGGCGGCTGCCGGCCGGCACCCGGTCGCTGCGGCTGACGCCGATGCTCGGCGAGCCGGGCCTTGCCATCGCCGAGTTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAGGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCAGGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 36213-34212 **** Predicted by CRISPRDetect 2.4 *** >NZ_JXOD01000089.1 Methylobacterium platani JCM 14648 contig_89, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================================== ================== 36212 29 100.0 32 ............................. CAGATGGTGAGGAACGCGGCGCCGGCATCGCC 36151 29 100.0 32 ............................. AACCCGGGCGAGGGCCGAACCGAGCTGCGCCA 36090 29 100.0 32 ............................. TCCTGACACGTACAATGAGTACATCAGAATAG 36029 29 100.0 32 ............................. CCTGAGGAGCACGCGATGCCGACGACCTTACC 35968 29 100.0 32 ............................. GACCCGGAAAGCTACTTCCGGTCCGTCAGCGA 35907 29 100.0 32 ............................. ACCTTCAGGCTGCAGTCACCCTGCACCACAAG 35846 29 100.0 32 ............................. GCGTTCCGGTGGTACTACAGCACCGAGTGCCC 35785 29 100.0 32 ............................. GCCTTGGCCTCCTCGTACTCATGATTGGCGAT 35724 29 100.0 32 ............................. TGTAACGAGTCCGGAATCCGATTCCGCTGGTG 35663 29 100.0 32 ............................. TACGCTCACGCGAGCCTTGATGATCTTCGGCA 35602 29 100.0 32 ............................. CCCGCTTCCTCGTCGCCCGCACGCCCGACGGG 35541 29 100.0 32 ............................. AGGTGGTGATCGGCATCCCGGCGGATGCCCCG 35480 29 100.0 32 ............................. CATTTGTCGACAAGATGGGAGGCGGCGATGTC 35419 29 100.0 32 ............................. GCCTCGCGCACCGCCATCTCCTGGATCTCGGC 35358 29 100.0 32 ............................. TTGTTAGTCGCCACACAGGGGCGACCCAAGCC 35297 29 100.0 32 ............................. CGGAACGACGTTGCTGCCCAACGGCTCGGCAA 35236 29 100.0 32 ............................. ACCAGGAGCGGAGTTTTGACAAGGCCGAAAGC 35175 29 100.0 32 ............................. GCCGAGGCGCGCTGCTGGATCGCGACGGTGTC 35114 29 100.0 32 ............................. CCCTATCCAGGTCCCACCTCCCGGACGCCGCG 35053 29 100.0 32 ............................. GCGCGGCCATTGACGCAGTAAAGCACCCGGGG 34992 29 100.0 32 ............................. AGCGCGGCGAACGCCTCCCGACCGTGTACGGT 34931 29 100.0 32 ............................. GTCCCTCTGGTCTGGTAGACCGTCACCGTACA 34870 29 100.0 32 ............................. CGGCCGGAGAGCGGCGCCAGCCCGACCACGCG 34809 29 100.0 32 ............................. ATCGAGGCGCCGGACGTCGCGTTGAGGGGCAC 34748 29 100.0 32 ............................. TTCGGCTGTCAGGTACGCAAGAGCCGAAGCGC 34687 29 100.0 32 ............................. TATGCCTTCCTGCGCGCCATCCGCTCAGCGAT 34626 29 100.0 32 ............................. CCGCTCACGCCACCGAGCGACACCGCGGCGTC 34565 29 100.0 32 ............................. TCCGGGCGTGGGTCGGCGACGCAGAGGGCGCC 34504 29 100.0 32 ............................. GTCTTGCGCACTATTGACGGATTTTTGTCCGC 34443 29 100.0 32 ............................. CCGCGCGAACGCGGCATCACGCGCGGCCTCGG 34382 29 96.6 52 ............................A CCCCTCGACAGGATGCGGGAGGGAGGTATGCTGCGCGGCACCGCTCGCTACG 34301 29 93.1 32 ............C......T......... ACAGTGCCGGTCACGGTGGCTGGTTCAGCGGC 34240 29 75.9 0 .A......T....C.......T....GAC | ========== ====== ====== ====== ============================= ==================================================== ================== 33 29 99.0 33 GTGTTCCCCGCAGGCGCGGGGATGAACCG # Left flank : CCCTGGCCCGACGAGGGCACCGTGCCGACCCGCCTCGCCGAGGAGAGTCGCCTCCTGCGCCTCGCCCGGGTCGAGGACGGCCGGCTCGCGCCCTGGGCCGAGGCGGCCGACCGGCCCCTCGCCTGGGCCCTCTCCGAGGTCTCGGTCACGGTCCGCCGGCTGCGCGGCCACCTCGCCCCCGCCCCGTCCTGGCACGCCGCCGTCGCGGCGGCCCGCACCGGCTGGAGCCGCTTCGAGGACGACGTGATCCTCCTGCCCCTGGAGCCGCAGGCCGGCGGCACGTGGCGGGGCACGCTGGTGGCGGAGGATGGCGGGACGCTGACGCTGACCTACGGGCCGCGGCTCGGCCTCGTCCTCTGACGACCCTGGCGCCCGGCGCCGATCTGGGGCATCACCGGACCGGCTCCGGGCGCCGGATCGGGCGGCCGGAACGGAGCGGAAACGTCGGTGCGCTGTTTGACATCGTAAAAGGCGAGGCGGATCAATCGCTTCCAGAAGGA # Right flank : AGTGCCGGTAACGGTATGACGCTTTCGCGGAACGTGGAAGGGTCGGTAGACTGACGGCGCGGCGCACCCGCCGCTCCGGTGCGGCCTTAGAGGGGAGTGTTCCATGTCCACGACGTGCAGTCTCAGTATTGCCCATAAGATCCGGATAGACATGTCGCGCTCGTCGCCGCAGCCGAACACGATCGTTCTGTCTCAATCGTCCAGGATCTCGATCAGGAGATAGCATTTCGGGGGCGAACCATCGCGCCGGCAGATGCGCCGGTCGTCCGCTCGATCGGTCCGGTCTATCGCCGCCCCCGCGAGCATGGCCTCCAGATGGAAAACAGTCTTCCGTCGGAGCGCGTCGGTCCGCCCTTGCCGTTACGCTCCGACCCGTGCAACCTTGGCCTGAGACGATCCAAGAACGATTCGCCCAGGGAGTGCCGTGGTCTCGCCCTTCTCCCTCCTGACCGAGGCCTGGATTCCCGTCCTGCGGGCGGACGGCGCGTTCGACACGATCC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAGGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCAGGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //