Array 1 7899-5951 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPKT01000053.1 Vibrio navarrensis strain VN-0512 NODE_53, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 7898 28 100.0 32 ............................ TCTTTGGAACCACAAAACATTGCGCTCGACAA 7838 28 100.0 32 ............................ ATTCGTGGCGGATGTGTTGAAGCTCGTTGAAC 7778 28 100.0 32 ............................ AAAAGGCGGGTTGCCTATTGCCAAAGAAAAAA 7718 28 100.0 32 ............................ TTGATGCTCGGTGGCAGCAAGGGAATTCAACG 7658 28 100.0 32 ............................ AAACACAAAAAATCCAAGGCCAATCATTAGAA 7598 28 100.0 32 ............................ ATCGGGTGATCGCTCGACGAATCCGGCTCAGA 7538 28 100.0 32 ............................ GCTTATTTTGTTATCTATGAAGCGCTCAAGGC 7478 28 100.0 32 ............................ TCCACATCCAGGCGGAAAATGTTCACCATATC 7418 28 100.0 32 ............................ TTGATGAAACACACCAAAGCGCAATTGAAACT 7358 28 100.0 32 ............................ GTTGTCGAAAGCACCCGCAAACCCTGCCGAAG 7298 28 100.0 32 ............................ GCAATCAGTGGCGTGAACAACTCCACGCTCAA 7238 28 100.0 32 ............................ ACTTAGAAAAATCGGATGCAAAAAAACCGCTA 7178 28 100.0 32 ............................ TTGATGTTGCGGATTTTTCCCTTGTACCACTC 7118 28 100.0 32 ............................ ATACTGATCCCGCCGACGCTTTGGCCGCTATT 7058 28 100.0 32 ............................ ATTTCAGCGATGTAAGCACCAAAGTCACTGAT 6998 28 100.0 32 ............................ CCATCTTTGAGCGCAGACAAGGTGATGCCCAT 6938 28 100.0 32 ............................ ACAAAAGGATTCATTGAGTTTGATAACTTAGC 6878 28 100.0 32 ............................ GTTTGGCGAATGGCGTGCATAGCTCAACCATT 6818 28 100.0 32 ............................ CAATCGAAGACCCTTCGGTTTTGCCTGGCTCA 6758 28 100.0 32 ............................ GTGTTGTTATTGCCACCTATACCAATCAGGCC 6698 28 100.0 32 ............................ TCTGAGCTTGCAAATCAAAGGTTTAATGGATC 6638 28 100.0 32 ............................ TCAATGCTTGGTACGTCAAGATAAAGCTCTAC 6578 28 100.0 32 ............................ TTAGCCCCCATCACCACACGCAGCCCTGCAAT 6518 28 100.0 32 ............................ AACCTGTCTAGCTTGGAACAAACGGTCGCTGA 6458 28 100.0 32 ............................ ACATCCGAAAACACGTTGGCGGGCGTGGTGGC 6398 28 100.0 32 ............................ CAGACGTTGCAAGTACCAAACATACGTTTGAT 6338 28 100.0 32 ............................ GCTCCGGCGGGCGGCGTAACCTACGGCAAGCC 6278 28 100.0 32 ............................ ACGACCACGAGTAATAACTCAGGTCAAAACGC 6218 28 100.0 32 ............................ TCATGGCCGCGTACTGCAACAGCGTGGTCGAT 6158 28 100.0 32 ............................ TGACCAGATATGCAAACCGACAGACGTTGGTG 6098 28 100.0 32 ............................ TATCAGAACAAATACGGCTTAAACACGATTCG 6038 28 100.0 32 ............................ TTAAAAACGGCAAGGGCGAACTTGCTCCTGTT 5978 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 33 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GATGTAACTTACGTAAGCTTTGTACGCAAGCAGGTGAAATCGCCCGAGCGAATAGAGCGGGATATGCAGCAAAAAGCCGCACTATGGGCAGCAAAATCTGGCAAACCGCTGGTGGAATGTTTAGTGGATTTGCAACAAAGCAAGCCGACAGCGTTGTGCACCTTGCCGTTTATTTACTTGCATAGCCAGCAAACCAAGCAACGTTCACCAGAGAAAAACAGCAAGTTCCCGCTGTTTATTGAGATGCAGCCGCAAAGCACATCACAAGATGGGAGCTTCGATTGCTATGGTTTAAGTAGCAAAGCGAATGGGCAGTCAATATTGGCGACCGTACCGCACTTTTAAATTGAACAAAAAAGGGTAGTTTTTACCCTTTATTTTTGCTCTTTAAAAATGTGCTTTAAATACAAATAGTTGCAATAGGTGGGTTTTAACAAGGTAAAAAGATGATTTTTATCCTAACATTCTGTTGCAGCTTATTTTTATCGGTTTATTCTATT # Right flank : ACAAAAACGCCACGAGCAAAGCTGGTGGCGTTGACATCAAATCCAATCATAACAATCGAGCATTTTAGATGCTCCCGTACCCCAAGCCGTACCTAGAGCGATTTTTGCTACGATTAAAAACCGTTTAAACCCTTATTTAATGCGCTCTAGCATCACGCCTGCTTCCATGTGGTGGGTGTAAGGGAACTGGTCAAACAGGGCGAAACGAGTAATGGTGTGGGTTTCGCTCAGGATTTCGAGGTTCTCGAGCAGGGTCTCTGGGTTGCACGAAATGTACAAAATGCGCTCATAGCCTTGCACCATTTTACAGGTGTCGATGTCCATACCTGCGCGCGGTGGATCGACAAAAATGGTGTCGCAGTTATAGCTATTAAGATCGATGCCATGGTCTTTCAGGCGGCGAAACTCGCGTTTGCCTTCCATCGCTTCGGTAAACTCTTCCGCTGACATACGGATGATCTGCACGTTCTCAATTTTGTTGGCGGCAATGTTGTATTGCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 5095-3884 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPKT01000060.1 Vibrio navarrensis strain VN-0512 NODE_60, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 5094 32 100.0 33 ................................ AAGAATTATCGCTTTTGAGTTGCCGAAGAATAC 5029 32 100.0 33 ................................ ATCACCATTGATGAGCTGGTAAAGAAATCAAAA 4964 32 100.0 33 ................................ TACGACGGTAAGTGCTGGGTGGAAGTGAAAGAA 4899 32 100.0 34 ................................ TTGGCATGGCTTGATGAAGTCATGCTTGAGTTTT 4833 32 100.0 33 ................................ CAATAACTGTTGTGTCTTCAGGCAGAGCTTGCT 4768 32 100.0 34 ................................ TAGTATCCCCTGAAAGTCAATTCCGAACATAGAG 4702 32 100.0 34 ................................ TACCGCGCCATTGCTGGACGCGACAATCTGATAC 4636 32 100.0 33 ................................ CATTTCCGCCCCGCTTAAAATGCTGCTGCTTAA 4571 32 100.0 33 ................................ ATCGAAACAAGCACATCAAATGTAATCACCGAC 4506 32 100.0 34 ................................ TATCGTGTAATCACTACTAGCAGAAATATCCTCA 4440 32 100.0 34 ................................ AAATAGACTTCGCCAGAACGGGTAGAGAACTCAC 4374 32 100.0 33 ................................ CAGTTCTTTGTACGTGAATTGCTTGCGCAGCTC 4309 32 100.0 34 ................................ GAGAAAAACGCATACATTTGCGGCGAGTCAATGA 4243 32 100.0 34 ................................ AGCGCAAGATTAAACCAGTCAACGAGCAACGGAT 4177 32 100.0 33 ................................ ACAGCAACTGCCCGACGAACTCAAACTATCTGG 4112 32 100.0 36 ................................ AAGAGATTGCCCCTCGCTTGGGTAAATATCGGTTAA 4044 32 100.0 33 ................................ CCGATCCAGATCTGCTAATGGACGACCTACAGC 3979 32 100.0 33 ................................ CCTACCATCTGAGGCACAGAAGGGCCAAATAAC 3914 31 96.9 0 ........................-....... | ========== ====== ====== ====== ================================ ==================================== ================== 19 32 99.8 34 GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Left flank : CGCCATTTGTGATCAAAAAATAAGGAGCGAGCCATGATGGTATTGGTCACCTACGATGTATCCTTTGCCAGTGAAGATGGTCAAAAACGCCTCAGACAATTAGCAAAGGTGTGTTTAGATAATGGAGTAAGGGTGCAGTATTCTGTATTTGAATGCGACATAGATGCCGCGCAATGGCTGCGCTTTAAAAATAAGCTGCTGTCAATTTACGACCCTGAAGTAGACAGTTTGCGTTTTTATAAGCTCGGTAAAAACTGGCAAAACAAAGTAGAGCACCATGGTGCGAAAGAAGCCATAGATATATTCAGAGATACCCTAATATTATAGTCGCTAGGCTTGAGTTCTCAGTAAAACACTGGGATCTAGCGATTGCATAAGCTCTTTAAAAATATAGGAAATAATTATCTGTATAGATTCACACAAAGTAGTTTTGTGCTACCGCGCAAAGTTAGCGGTAACCAATAGAGTGTGTTAGTCTGTACGTGCCTCTAAGAAGAGGC # Right flank : CAGACAATCTCTATCTCATACACAGCTCTGATAATGGTGCCTGCCGCAAGTAACGTAATACTCCTTAGCTGAGGCTTGAGTCGTATGCAGTGAGAGTTGCACTTATGGACAACACTCAGTAACCAGTATTGCCTATTGTGCTCCATCAATAAGAGACCAAATATATGCCCGTATCTTAACTATTAGAATTTTTTCTTGTGTCAAACGTGAATTCCATGTGTCAAACGTGAATTCCATATGTGACACAGGTTCTTTCAACAAGGAAGAATTCCTTCCCAGTTCGATTGAAGAGGCGGAGAGAGCTGAGGAACAGAAGTGTTAACTGCTTTGCAGTTAACTTTCCTAGCTTGTCCACTTTTTGCTTGGTTATTCGTTATTTGTGAATATTTAATTTCTCTAAGTTTAGAGGCTGGCTTTTATCTATTTTAAAGTTCTAATTTGCCTTGAAGCCTTATGGGTAAAGGGCTTAGGTATGGACTATGTTTTACTTATTTTATATA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //