Array 1 107718-106893 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LDTR01000025.1 Staphylococcus warneri strain NS346 contig_25, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=================================	=================================	==================
    107717	    33	 100.0	    33	.................................	AACAATCTACTTCAGTACTTGTAAAACGTCTTA	
    107651	    33	 100.0	    33	.................................	AACAAAAGGAGTGAGAAATTATGAAAGAAAGAT	
    107585	    33	 100.0	    33	.................................	AACATAACTTAATATTAGCTTGATAGTTGAGGC	
    107519	    33	 100.0	    33	.................................	AACAGTGAAAGGTGCAGTTTGACAAACGACCGG	
    107453	    33	 100.0	    33	.................................	AACACCTGTAACTGTGTCTCTACCAATAGGAAT	
    107387	    33	 100.0	    33	.................................	AACCGTTAAGAATTAATAATAGCAACCAATTGG	
    107321	    33	 100.0	    33	.................................	AACAGACCCGTGTATGGTATCTCTATGGACGTC	
    107255	    33	 100.0	    33	.................................	AACAAACTGAGTGGCATGGACGACGAAGGTACC	
    107189	    33	 100.0	    33	.................................	AACTATAAATTATGTGATCGAATGGATAAGAGA	
    107123	    33	 100.0	    32	.................................	AACATATCAAATGCTTAACTTAGGTAAATATC 	
    107058	    33	 100.0	    33	.................................	AACTCCTGCATACGAAAATACTTCAATCAGTGC	
    106992	    33	 100.0	    33	.................................	AACGCTTTTTGAAAAATACAACTGAAGCTTTTA	
    106926	    33	  97.0	     0	................................G	|                                	A [106895]
==========	======	======	======	=================================	=================================	==================
        13	    33	  99.8	    33	GTTTTAGTACTCTGTAATTTTAGGTATGAGTGA	                                 	       

# Left flank :   CGCTAGA
# Right flank :  ATTGGAGGATATTTATGAGTAGCATGAGGAAGCCGATTATAAAAAATATTAGTTATTCTAATGAAGAGCTAGTTAATTCATTAGGCGAGTGGCAACAGAGTGATGATTCCAAATTTTTACTCAGATATCCCACTGTCTATATTATAAATGATAAAAATAAGTCTGATCACTTTAATTTGTATGTTGGTGAAACAACGGATATCAAAAATAGAACTATTCAACATTTGAAAAATGATGTGAAGCTTAAAGACTATTGGAAATCATTTTACAGTTCTGATACGTCTTCAATGTATGTCATCGGACATCCGTTCTTTAATAAGTCTTTAACTTTAGATATTGAGAACAAGTTTATGCAGTATTTGTCTAGTGTAGATGCTGTGACTTCAATATTTAATAGTAGAACAAATCAGCAAAATGAATATTATACTTCTGAAAAATTAGATGAAATATTCACAAATATTTGGCAACAATTACATAAAGAGAATAGCAAACTTTTTCCT

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTACTCTGTAATTTTAGGTATGAGTGA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGTACTCTGTAATTTTAGGTATGAGGTA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-1.60,-3.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [4-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [70.0-5.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,5.28   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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